EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLEG00000042151 (Gene tree)
Gene ID: 105548515
Gene Symbol: RTCA
Alias: RPC|RTC1|RTCD1
Full Name: RNA 3'-terminal phosphate cyclase
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Plus strand
Length: 32353 bases
Position: chrKN976393.1:725044-757396
Accession: 105548515
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000036072	RTC	PF01137.21	1.4e-52	1	2
ENSMLEP00000036072	RTC	PF01137.21	1.4e-52	2	2
ENSMLEP00000036068	RTC	PF01137.21	7.1e-47	1	2
ENSMLEP00000036068	RTC	PF01137.21	7.1e-47	2	2
ENSMLEP00000036072	RTC_insert	PF05189.13	1.6e-24	1	1
ENSMLEP00000036068	RTC_insert	PF05189.13	1.7e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000059672	RTCA-202	900	-	ENSMLEP00000036072	299 (aa)	-	A0A2K6A7P7
ENSMLET00000059668	RTCA-201	939	XM_011992557	ENSMLEP00000036068	312 (aa)	XP_011847947	A0A2K6A7R5

Gene Model

Click here to download ENSMLEG00000042151's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000042151's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000042151	RTCA	100	81.530	ENSG00000137996	RTCA	100	100.000	Homo_sapiens
ENSMLEG00000042151	RTCA	51	30.247	ENSG00000120158	RCL1	72	30.247	Homo_sapiens
ENSMLEG00000042151	RTCA	98	58.726	ENSAPOG00000001345	rtca	98	58.726	Acanthochromis_polyacanthus
ENSMLEG00000042151	RTCA	78	82.900	ENSAMEG00000008855	RTCA	100	82.900	Ailuropoda_melanoleuca
ENSMLEG00000042151	RTCA	98	59.280	ENSACIG00000019643	rtca	99	59.280	Amphilophus_citrinellus
ENSMLEG00000042151	RTCA	100	58.470	ENSAOCG00000014979	rtca	99	58.470	Amphiprion_ocellaris
ENSMLEG00000042151	RTCA	100	58.470	ENSAPEG00000006945	rtca	99	58.470	Amphiprion_percula
ENSMLEG00000042151	RTCA	95	58.689	ENSATEG00000006315	rtca	96	58.689	Anabas_testudineus
ENSMLEG00000042151	RTCA	95	64.972	ENSAPLG00000015430	RTCA	100	64.972	Anas_platyrhynchos
ENSMLEG00000042151	RTCA	100	79.781	ENSANAG00000025446	RTCA	100	79.781	Aotus_nancymaae
ENSMLEG00000042151	RTCA	100	57.923	ENSACLG00000020770	rtca	99	57.923	Astatotilapia_calliptera
ENSMLEG00000042151	RTCA	100	60.109	ENSAMXG00000043271	rtca	100	60.109	Astyanax_mexicanus
ENSMLEG00000042151	RTCA	100	79.235	ENSBTAG00000006321	RTCA	100	79.235	Bos_taurus
ENSMLEG00000042151	RTCA	100	88.822	ENSCJAG00000003398	RTCA	100	88.822	Callithrix_jacchus
ENSMLEG00000042151	RTCA	100	78.415	ENSCAFG00000020010	RTCA	68	78.415	Canis_familiaris
ENSMLEG00000042151	RTCA	100	78.415	ENSCAFG00020011528	RTCA	57	78.415	Canis_lupus_dingo
ENSMLEG00000042151	RTCA	100	78.962	ENSCHIG00000018937	RTCA	100	78.962	Capra_hircus
ENSMLEG00000042151	RTCA	100	76.503	ENSTSYG00000011305	RTCA	100	76.503	Carlito_syrichta
ENSMLEG00000042151	RTCA	100	80.055	ENSCCAG00000021844	RTCA	100	80.055	Cebus_capucinus
ENSMLEG00000042151	RTCA	91	30.303	ENSCCAG00000033505	RCL1	81	30.303	Cebus_capucinus
ENSMLEG00000042151	RTCA	100	82.322	ENSCATG00000019364	RTCA	100	82.322	Cercocebus_atys
ENSMLEG00000042151	RTCA	84	76.025	ENSCLAG00000006125	RTCA	100	76.025	Chinchilla_lanigera
ENSMLEG00000042151	RTCA	100	81.694	ENSCSAG00000001509	RTCA	100	81.694	Chlorocebus_sabaeus
ENSMLEG00000042151	RTCA	100	77.049	ENSCHOG00000005211	RTCA	100	77.049	Choloepus_hoffmanni
ENSMLEG00000042151	RTCA	100	68.306	ENSCPBG00000026658	RTCA	100	68.306	Chrysemys_picta_bellii
ENSMLEG00000042151	RTCA	68	30.189	ENSCPBG00000025481	RCL1	59	30.189	Chrysemys_picta_bellii
ENSMLEG00000042151	RTCA	98	45.706	ENSCING00000007875	-	98	45.706	Ciona_intestinalis
ENSMLEG00000042151	RTCA	98	44.598	ENSCSAVG00000007269	-	98	44.598	Ciona_savignyi
ENSMLEG00000042151	RTCA	100	82.058	ENSCANG00000040106	RTCA	100	82.058	Colobus_angolensis_palliatus
ENSMLEG00000042151	RTCA	89	72.876	ENSCGRG00001013163	Rtca	97	72.876	Cricetulus_griseus_chok1gshd
ENSMLEG00000042151	RTCA	99	55.890	ENSCSEG00000000530	rtca	98	55.890	Cynoglossus_semilaevis
ENSMLEG00000042151	RTCA	100	53.824	ENSCVAG00000021809	rtca	100	53.824	Cyprinodon_variegatus
ENSMLEG00000042151	RTCA	100	60.383	ENSDARG00000002215	rtca	100	60.383	Danio_rerio
ENSMLEG00000042151	RTCA	100	77.322	ENSDNOG00000000456	RTCA	100	77.322	Dasypus_novemcinctus
ENSMLEG00000042151	RTCA	100	75.956	ENSDORG00000005448	Rtca	100	75.956	Dipodomys_ordii
ENSMLEG00000042151	RTCA	87	35.154	FBgn0025630	Rtca	81	35.154	Drosophila_melanogaster
ENSMLEG00000042151	RTCA	89	46.844	ENSEBUG00000008556	rtca	81	46.844	Eptatretus_burgeri
ENSMLEG00000042151	RTCA	100	78.689	ENSEASG00005015926	RTCA	100	78.689	Equus_asinus_asinus
ENSMLEG00000042151	RTCA	100	78.689	ENSECAG00000019831	RTCA	100	78.689	Equus_caballus
ENSMLEG00000042151	RTCA	89	73.633	ENSEEUG00000001165	RTCA	90	73.633	Erinaceus_europaeus
ENSMLEG00000042151	RTCA	98	59.280	ENSELUG00000003741	rtca	99	59.280	Esox_lucius
ENSMLEG00000042151	RTCA	100	78.689	ENSFCAG00000024460	RTCA	100	78.689	Felis_catus
ENSMLEG00000042151	RTCA	89	75.839	ENSFALG00000002443	RTCA	80	75.839	Ficedula_albicollis
ENSMLEG00000042151	RTCA	98	59.945	ENSFDAG00000016084	-	100	59.945	Fukomys_damarensis
ENSMLEG00000042151	RTCA	100	78.415	ENSFDAG00000012070	-	100	78.415	Fukomys_damarensis
ENSMLEG00000042151	RTCA	54	75.625	ENSFHEG00000002868	rtca	69	75.625	Fundulus_heteroclitus
ENSMLEG00000042151	RTCA	100	56.284	ENSGMOG00000013264	rtca	100	56.284	Gadus_morhua
ENSMLEG00000042151	RTCA	100	68.033	ENSGALG00000005277	RTCA	100	68.033	Gallus_gallus
ENSMLEG00000042151	RTCA	100	59.016	ENSGAFG00000011853	rtca	99	59.016	Gambusia_affinis
ENSMLEG00000042151	RTCA	100	56.557	ENSGACG00000013497	rtca	100	56.557	Gasterosteus_aculeatus
ENSMLEG00000042151	RTCA	87	75.427	ENSGAGG00000023306	RTCA	100	75.427	Gopherus_agassizii
ENSMLEG00000042151	RTCA	100	80.055	ENSGGOG00000044018	-	100	80.055	Gorilla_gorilla
ENSMLEG00000042151	RTCA	100	81.530	ENSGGOG00000009546	-	100	81.530	Gorilla_gorilla
ENSMLEG00000042151	RTCA	100	57.923	ENSHBUG00000002114	rtca	99	57.923	Haplochromis_burtoni
ENSMLEG00000042151	RTCA	100	77.596	ENSHGLG00000002617	RTCA	100	77.596	Heterocephalus_glaber_female
ENSMLEG00000042151	RTCA	100	77.596	ENSHGLG00100006056	RTCA	100	77.596	Heterocephalus_glaber_male
ENSMLEG00000042151	RTCA	100	53.005	ENSHCOG00000020628	rtca	89	53.005	Hippocampus_comes
ENSMLEG00000042151	RTCA	100	60.383	ENSIPUG00000024803	rtca	100	60.383	Ictalurus_punctatus
ENSMLEG00000042151	RTCA	100	71.585	ENSSTOG00000013528	-	100	71.585	Ictidomys_tridecemlineatus
ENSMLEG00000042151	RTCA	100	67.030	ENSSTOG00000033099	-	100	67.030	Ictidomys_tridecemlineatus
ENSMLEG00000042151	RTCA	100	57.186	ENSJJAG00000016178	Rtca	100	57.186	Jaculus_jaculus
ENSMLEG00000042151	RTCA	98	59.280	ENSKMAG00000006651	rtca	98	59.280	Kryptolebias_marmoratus
ENSMLEG00000042151	RTCA	85	55.140	ENSLBEG00000002448	-	99	55.140	Labrus_bergylta
ENSMLEG00000042151	RTCA	98	57.341	ENSLBEG00000028971	rtca	99	57.341	Labrus_bergylta
ENSMLEG00000042151	RTCA	100	63.934	ENSLACG00000013666	RTCA	100	63.934	Latimeria_chalumnae
ENSMLEG00000042151	RTCA	100	59.563	ENSLOCG00000000093	rtca	99	59.563	Lepisosteus_oculatus
ENSMLEG00000042151	RTCA	100	76.776	ENSLAFG00000001473	RTCA	100	76.776	Loxodonta_africana
ENSMLEG00000042151	RTCA	100	82.322	ENSMFAG00000034132	RTCA	100	82.322	Macaca_fascicularis
ENSMLEG00000042151	RTCA	100	81.794	ENSMMUG00000019105	RTCA	100	81.794	Macaca_mulatta
ENSMLEG00000042151	RTCA	89	79.402	ENSMNEG00000037163	RTCA	97	79.402	Macaca_nemestrina
ENSMLEG00000042151	RTCA	100	60.383	ENSMAMG00000016536	rtca	100	60.383	Mastacembelus_armatus
ENSMLEG00000042151	RTCA	100	57.923	ENSMZEG00005017945	rtca	99	57.923	Maylandia_zebra
ENSMLEG00000042151	RTCA	84	64.263	ENSMGAG00000006892	RTCA	100	63.750	Meleagris_gallopavo
ENSMLEG00000042151	RTCA	100	75.410	ENSMAUG00000008488	Rtca	100	75.410	Mesocricetus_auratus
ENSMLEG00000042151	RTCA	79	84.074	ENSMICG00000008643	RTCA	87	84.074	Microcebus_murinus
ENSMLEG00000042151	RTCA	100	75.683	ENSMOCG00000016660	Rtca	100	75.683	Microtus_ochrogaster
ENSMLEG00000042151	RTCA	79	63.704	ENSMMOG00000007750	rtca	87	63.704	Mola_mola
ENSMLEG00000042151	RTCA	100	74.317	ENSMODG00000003557	RTCA	100	74.317	Monodelphis_domestica
ENSMLEG00000042151	RTCA	100	59.836	ENSMALG00000020844	rtca	100	59.836	Monopterus_albus
ENSMLEG00000042151	RTCA	100	74.863	MGP_CAROLIEiJ_G0025565	Rtca	100	90.845	Mus_caroli
ENSMLEG00000042151	RTCA	100	74.590	ENSMUSG00000000339	Rtca	100	90.845	Mus_musculus
ENSMLEG00000042151	RTCA	100	74.590	MGP_PahariEiJ_G0027011	Rtca	100	90.141	Mus_pahari
ENSMLEG00000042151	RTCA	100	74.590	MGP_SPRETEiJ_G0026515	Rtca	100	90.141	Mus_spretus
ENSMLEG00000042151	RTCA	100	78.689	ENSMPUG00000012119	RTCA	100	78.689	Mustela_putorius_furo
ENSMLEG00000042151	RTCA	100	70.300	ENSMLUG00000009922	RTCA	100	70.300	Myotis_lucifugus
ENSMLEG00000042151	RTCA	100	75.137	ENSNGAG00000011540	Rtca	99	75.137	Nannospalax_galili
ENSMLEG00000042151	RTCA	100	57.923	ENSNBRG00000003062	rtca	99	57.923	Neolamprologus_brichardi
ENSMLEG00000042151	RTCA	100	81.530	ENSNLEG00000031426	RTCA	100	81.530	Nomascus_leucogenys
ENSMLEG00000042151	RTCA	64	96.591	ENSMEUG00000010030	-	53	96.591	Notamacropus_eugenii
ENSMLEG00000042151	RTCA	78	76.952	ENSOPRG00000012092	RTCA	71	76.952	Ochotona_princeps
ENSMLEG00000042151	RTCA	94	77.011	ENSODEG00000006990	RTCA	96	77.208	Octodon_degus
ENSMLEG00000042151	RTCA	100	57.923	ENSONIG00000007753	rtca	99	57.923	Oreochromis_niloticus
ENSMLEG00000042151	RTCA	84	69.716	ENSOANG00000012055	RTCA	98	69.716	Ornithorhynchus_anatinus
ENSMLEG00000042151	RTCA	100	78.415	ENSOCUG00000014247	RTCA	100	78.415	Oryctolagus_cuniculus
ENSMLEG00000042151	RTCA	100	58.470	ENSORLG00000013605	rtca	100	58.470	Oryzias_latipes
ENSMLEG00000042151	RTCA	100	58.470	ENSORLG00020001904	rtca	100	58.470	Oryzias_latipes_hni
ENSMLEG00000042151	RTCA	100	58.470	ENSORLG00015021064	rtca	100	58.470	Oryzias_latipes_hsok
ENSMLEG00000042151	RTCA	100	59.290	ENSOMEG00000000756	rtca	100	59.290	Oryzias_melastigma
ENSMLEG00000042151	RTCA	100	75.137	ENSOGAG00000005627	RTCA	100	75.137	Otolemur_garnettii
ENSMLEG00000042151	RTCA	84	75.472	ENSOARG00000018122	RTCA	100	75.472	Ovis_aries
ENSMLEG00000042151	RTCA	100	81.003	ENSPPAG00000035119	RTCA	100	81.003	Pan_paniscus
ENSMLEG00000042151	RTCA	100	78.689	ENSPPRG00000000350	RTCA	100	78.689	Panthera_pardus
ENSMLEG00000042151	RTCA	100	78.415	ENSPTIG00000012816	RTCA	100	78.415	Panthera_tigris_altaica
ENSMLEG00000042151	RTCA	100	81.003	ENSPTRG00000001004	RTCA	100	81.003	Pan_troglodytes
ENSMLEG00000042151	RTCA	100	81.148	ENSPANG00000000346	RTCA	100	81.148	Papio_anubis
ENSMLEG00000042151	RTCA	100	60.656	ENSPKIG00000001653	rtca	100	60.656	Paramormyrops_kingsleyae
ENSMLEG00000042151	RTCA	100	68.852	ENSPSIG00000011408	RTCA	100	68.852	Pelodiscus_sinensis
ENSMLEG00000042151	RTCA	100	75.410	ENSPEMG00000018582	Rtca	100	75.410	Peromyscus_maniculatus_bairdii
ENSMLEG00000042151	RTCA	99	51.233	ENSPMAG00000009110	rtca	99	51.233	Petromyzon_marinus
ENSMLEG00000042151	RTCA	100	74.863	ENSPCIG00000007684	RTCA	100	74.863	Phascolarctos_cinereus
ENSMLEG00000042151	RTCA	100	59.401	ENSPFOG00000004824	rtca	100	59.401	Poecilia_formosa
ENSMLEG00000042151	RTCA	100	59.563	ENSPLAG00000011753	rtca	99	59.563	Poecilia_latipinna
ENSMLEG00000042151	RTCA	100	59.563	ENSPMEG00000020469	rtca	99	59.563	Poecilia_mexicana
ENSMLEG00000042151	RTCA	100	60.383	ENSPREG00000001365	rtca	99	60.383	Poecilia_reticulata
ENSMLEG00000042151	RTCA	100	80.874	ENSPPYG00000001115	RTCA	100	80.874	Pongo_abelii
ENSMLEG00000042151	RTCA	100	74.317	ENSPCAG00000005076	RTCA	100	74.317	Procavia_capensis
ENSMLEG00000042151	RTCA	100	79.508	ENSPCOG00000005603	RTCA	94	95.918	Propithecus_coquereli
ENSMLEG00000042151	RTCA	100	76.781	ENSPVAG00000009478	RTCA	100	76.781	Pteropus_vampyrus
ENSMLEG00000042151	RTCA	100	57.923	ENSPNYG00000004722	rtca	99	57.923	Pundamilia_nyererei
ENSMLEG00000042151	RTCA	100	60.383	ENSPNAG00000022270	rtca	100	60.383	Pygocentrus_nattereri
ENSMLEG00000042151	RTCA	100	75.137	ENSRNOG00000014575	Rtca	100	75.137	Rattus_norvegicus
ENSMLEG00000042151	RTCA	100	81.530	ENSRBIG00000041180	RTCA	100	81.530	Rhinopithecus_bieti
ENSMLEG00000042151	RTCA	100	81.530	ENSRROG00000024929	RTCA	100	81.530	Rhinopithecus_roxellana
ENSMLEG00000042151	RTCA	100	79.508	ENSSBOG00000028626	RTCA	100	79.508	Saimiri_boliviensis_boliviensis
ENSMLEG00000042151	RTCA	100	74.317	ENSSHAG00000001758	RTCA	100	74.317	Sarcophilus_harrisii
ENSMLEG00000042151	RTCA	98	56.944	ENSSMAG00000014680	rtca	97	56.944	Scophthalmus_maximus
ENSMLEG00000042151	RTCA	98	58.889	ENSSDUG00000015585	rtca	97	58.889	Seriola_dumerili
ENSMLEG00000042151	RTCA	95	58.689	ENSSLDG00000018985	rtca	95	58.689	Seriola_lalandi_dorsalis
ENSMLEG00000042151	RTCA	84	67.722	ENSSARG00000013993	RTCA	100	67.722	Sorex_araneus
ENSMLEG00000042151	RTCA	100	57.650	ENSSPAG00000011938	rtca	99	57.650	Stegastes_partitus
ENSMLEG00000042151	RTCA	100	78.689	ENSSSCG00000006865	RTCA	100	78.689	Sus_scrofa
ENSMLEG00000042151	RTCA	100	68.852	ENSTGUG00000005154	RTCA	100	68.852	Taeniopygia_guttata
ENSMLEG00000042151	RTCA	100	58.743	ENSTRUG00000008799	rtca	100	58.743	Takifugu_rubripes
ENSMLEG00000042151	RTCA	100	59.563	ENSTNIG00000004725	rtca	100	59.563	Tetraodon_nigroviridis
ENSMLEG00000042151	RTCA	53	85.000	ENSTBEG00000000943	RTCA	53	85.000	Tupaia_belangeri
ENSMLEG00000042151	RTCA	100	78.364	ENSTTRG00000015327	RTCA	100	78.364	Tursiops_truncatus
ENSMLEG00000042151	RTCA	89	85.235	ENSUAMG00000017265	RTCA	84	85.235	Ursus_americanus
ENSMLEG00000042151	RTCA	100	77.596	ENSUMAG00000007881	RTCA	100	77.596	Ursus_maritimus
ENSMLEG00000042151	RTCA	84	68.788	ENSVPAG00000001039	RTCA	87	68.788	Vicugna_pacos
ENSMLEG00000042151	RTCA	100	86.405	ENSVVUG00000022041	RTCA	65	86.405	Vulpes_vulpes
ENSMLEG00000042151	RTCA	99	50.954	ENSXETG00000031661	RTCA	99	50.954	Xenopus_tropicalis
ENSMLEG00000042151	RTCA	100	51.955	ENSXCOG00000008002	rtca	100	51.955	Xiphophorus_couchianus
ENSMLEG00000042151	RTCA	100	59.290	ENSXMAG00000005482	rtca	99	59.290	Xiphophorus_maculatus