EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000042247 (Gene tree)
Gene ID: 105554052
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 4674 bases
Position: chrKN978502.1:326588-331261
Accession: 105554052
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000036250	MMR_HSR1	PF01926.23	0.00019	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000059852	-	1316	XM_012000292	ENSMLEP00000036252	122 (aa)	XP_011855682	A0A2K6A885
ENSMLET00000059850	-	1188	XM_012000291	ENSMLEP00000036250	203 (aa)	XP_011855681	A0A2K6A863
ENSMLET00000059856	-	375	-	ENSMLEP00000036256	124 (aa)	-	A0A2K6A861

Gene Model

Click here to download ENSMLEG00000042247's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000042247's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000042247	-	80	38.824	ENSMLEG00000017215	RAB9A	83	38.824
ENSMLEG00000042247	-	67	48.529	ENSMLEG00000032505	RAB11A	88	48.529
ENSMLEG00000042247	-	91	42.424	ENSMLEG00000030601	-	91	42.424
ENSMLEG00000042247	-	79	38.272	ENSMLEG00000039333	NRAS	90	38.272
ENSMLEG00000042247	-	87	42.781	ENSMLEG00000031891	RAB33A	79	42.781
ENSMLEG00000042247	-	95	37.379	ENSMLEG00000034269	RAB34	92	37.379
ENSMLEG00000042247	-	91	54.348	ENSMLEG00000040858	RAB1B	92	54.348
ENSMLEG00000042247	-	91	36.702	ENSMLEG00000035868	RAB22A	97	36.702
ENSMLEG00000042247	-	78	30.189	ENSMLEG00000032621	-	67	30.189
ENSMLEG00000042247	-	79	39.506	ENSMLEG00000042070	HRAS	85	39.506
ENSMLEG00000042247	-	86	46.629	ENSMLEG00000029019	RAB39B	84	46.629
ENSMLEG00000042247	-	83	41.379	ENSMLEG00000033393	RAB33B	76	41.379
ENSMLEG00000042247	-	79	37.888	ENSMLEG00000038149	RAB41	72	37.888
ENSMLEG00000042247	-	80	49.383	ENSMLEG00000039496	RAB30	80	49.383
ENSMLEG00000042247	-	78	43.671	ENSMLEG00000038771	RAB6A	76	43.671
ENSMLEG00000042247	-	68	53.623	ENSMLEG00000030130	RAB3C	84	53.623
ENSMLEG00000042247	-	58	31.405	ENSMLEG00000028348	ARL14	60	31.405
ENSMLEG00000042247	-	83	35.632	ENSMLEG00000043731	RERG	84	35.632
ENSMLEG00000042247	-	85	42.197	ENSMLEG00000025037	RAB25	81	42.197
ENSMLEG00000042247	-	80	38.323	ENSMLEG00000040660	RAB7A	81	38.323
ENSMLEG00000042247	-	95	39.062	ENSMLEG00000028944	RAB5A	89	39.062
ENSMLEG00000042247	-	97	51.269	ENSMLEG00000042535	RAB1A	96	51.269
ENSMLEG00000042247	-	86	44.318	ENSMLEG00000033595	RAB18	85	44.318
ENSMLEG00000042247	-	80	40.476	ENSMLEG00000027985	RAB9B	83	40.476
ENSMLEG00000042247	-	95	36.979	ENSMLEG00000034462	RAB5B	89	36.979
ENSMLEG00000042247	-	58	30.252	ENSMLEG00000026260	-	55	30.252
ENSMLEG00000042247	-	91	36.757	ENSMLEG00000028386	KRAS	98	37.436
ENSMLEG00000042247	-	79	37.423	ENSMLEG00000034659	MRAS	78	37.423
ENSMLEG00000042247	-	62	31.429	ENSMLEG00000034228	ARFRP1	67	31.429
ENSMLEG00000042247	-	81	38.182	ENSMLEG00000042429	RAB23	69	38.182
ENSMLEG00000042247	-	83	48.214	ENSMLEG00000043065	RAB2B	78	48.214
ENSMLEG00000042247	-	81	44.242	ENSMLEG00000031858	RAB14	77	44.242

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000042247	-	100	100.000	ENSG00000143545	RAB13	100	100.000	Homo_sapiens
ENSMLEG00000042247	-	99	75.124	ENSACIG00000008584	rab13	97	75.124	Amphilophus_citrinellus
ENSMLEG00000042247	-	100	98.522	ENSANAG00000030247	-	100	98.522	Aotus_nancymaae
ENSMLEG00000042247	-	99	78.713	ENSAMXG00000030712	rab13	99	78.713	Astyanax_mexicanus
ENSMLEG00000042247	-	100	98.030	ENSBTAG00000017604	RAB13	100	98.030	Bos_taurus
ENSMLEG00000042247	-	80	47.239	WBGene00019317	K02E10.1	75	47.239	Caenorhabditis_elegans
ENSMLEG00000042247	-	100	98.030	ENSCJAG00000009933	-	100	98.030	Callithrix_jacchus
ENSMLEG00000042247	-	100	97.537	ENSCHIG00000022271	-	100	97.537	Capra_hircus
ENSMLEG00000042247	-	99	91.089	ENSCPOG00000011491	-	99	91.089	Cavia_porcellus
ENSMLEG00000042247	-	100	99.507	ENSCCAG00000028502	-	100	99.507	Cebus_capucinus
ENSMLEG00000042247	-	100	100.000	ENSCATG00000041779	-	100	100.000	Cercocebus_atys
ENSMLEG00000042247	-	100	91.133	ENSCLAG00000006603	-	100	91.133	Chinchilla_lanigera
ENSMLEG00000042247	-	100	100.000	ENSCANG00000036573	-	100	100.000	Colobus_angolensis_palliatus
ENSMLEG00000042247	-	100	95.567	ENSCGRG00001021505	Rab13	100	95.567	Cricetulus_griseus_chok1gshd
ENSMLEG00000042247	-	100	95.567	ENSCGRG00000012126	Rab13	100	95.567	Cricetulus_griseus_crigri
ENSMLEG00000042247	-	99	75.980	ENSCSEG00000002358	rab13	99	75.980	Cynoglossus_semilaevis
ENSMLEG00000042247	-	99	78.218	ENSDARG00000034771	rab13	99	78.218	Danio_rerio
ENSMLEG00000042247	-	100	94.581	ENSDORG00000001591	Rab13	100	94.581	Dipodomys_ordii
ENSMLEG00000042247	-	100	98.522	ENSEASG00005000683	-	100	98.522	Equus_asinus_asinus
ENSMLEG00000042247	-	100	98.522	ENSECAG00000016551	RAB13	100	98.522	Equus_caballus
ENSMLEG00000042247	-	99	90.099	ENSEEUG00000001233	-	99	90.099	Erinaceus_europaeus
ENSMLEG00000042247	-	99	76.733	ENSELUG00000012801	rab13	99	76.733	Esox_lucius
ENSMLEG00000042247	-	100	92.118	ENSFCAG00000045269	-	100	92.118	Felis_catus
ENSMLEG00000042247	-	65	96.970	ENSFDAG00000014469	-	100	96.970	Fukomys_damarensis
ENSMLEG00000042247	-	99	75.743	ENSFHEG00000021221	rab13	95	85.549	Fundulus_heteroclitus
ENSMLEG00000042247	-	99	75.248	ENSGACG00000011925	rab13	99	75.248	Gasterosteus_aculeatus
ENSMLEG00000042247	-	85	90.751	ENSGAGG00000000742	-	99	81.281	Gopherus_agassizii
ENSMLEG00000042247	-	100	100.000	ENSGGOG00000023693	RAB13	100	100.000	Gorilla_gorilla
ENSMLEG00000042247	-	100	90.148	ENSHGLG00000008749	RAB13	100	90.148	Heterocephalus_glaber_female
ENSMLEG00000042247	-	100	90.148	ENSHGLG00100013608	RAB13	100	90.148	Heterocephalus_glaber_male
ENSMLEG00000042247	-	99	73.762	ENSHCOG00000007440	rab13	95	86.127	Hippocampus_comes
ENSMLEG00000042247	-	99	77.000	ENSIPUG00000003199	rab13	99	77.000	Ictalurus_punctatus
ENSMLEG00000042247	-	100	97.044	ENSSTOG00000011222	-	100	97.044	Ictidomys_tridecemlineatus
ENSMLEG00000042247	-	100	92.118	ENSJJAG00000010575	Rab13	100	92.118	Jaculus_jaculus
ENSMLEG00000042247	-	99	75.500	ENSKMAG00000001908	rab13	99	75.500	Kryptolebias_marmoratus
ENSMLEG00000042247	-	99	77.000	ENSLBEG00000026779	rab13	99	77.000	Labrus_bergylta
ENSMLEG00000042247	-	85	77.907	ENSLACG00000008103	-	97	77.907	Latimeria_chalumnae
ENSMLEG00000042247	-	100	100.000	ENSMFAG00000041018	RAB13	100	100.000	Macaca_fascicularis
ENSMLEG00000042247	-	100	100.000	ENSMNEG00000028951	-	100	100.000	Macaca_nemestrina
ENSMLEG00000042247	-	99	75.248	ENSMAMG00000014602	rab13	99	75.248	Mastacembelus_armatus
ENSMLEG00000042247	-	100	94.581	ENSMAUG00000015713	Rab13	100	94.581	Mesocricetus_auratus
ENSMLEG00000042247	-	100	97.044	ENSMICG00000010340	-	100	97.044	Microcebus_murinus
ENSMLEG00000042247	-	100	95.567	ENSMOCG00000021448	Rab13	100	95.567	Microtus_ochrogaster
ENSMLEG00000042247	-	99	92.574	ENSMODG00000017295	-	84	92.574	Monodelphis_domestica
ENSMLEG00000042247	-	100	92.611	MGP_CAROLIEiJ_G0025227	Rab13	100	92.611	Mus_caroli
ENSMLEG00000042247	-	100	91.626	ENSMUSG00000027935	Rab13	100	91.626	Mus_musculus
ENSMLEG00000042247	-	99	92.079	MGP_PahariEiJ_G0026671	Rab13	99	92.079	Mus_pahari
ENSMLEG00000042247	-	100	95.567	ENSNGAG00000010309	Rab13	100	95.567	Nannospalax_galili
ENSMLEG00000042247	-	99	75.248	ENSNBRG00000004124	rab13	99	75.248	Neolamprologus_brichardi
ENSMLEG00000042247	-	100	100.000	ENSNLEG00000028944	-	100	100.000	Nomascus_leucogenys
ENSMLEG00000042247	-	100	92.157	ENSMEUG00000009667	-	100	92.157	Notamacropus_eugenii
ENSMLEG00000042247	-	63	97.638	ENSODEG00000012634	-	100	97.638	Octodon_degus
ENSMLEG00000042247	-	100	89.655	ENSODEG00000010443	-	100	89.655	Octodon_degus
ENSMLEG00000042247	-	99	75.743	ENSONIG00000006340	rab13	99	75.743	Oreochromis_niloticus
ENSMLEG00000042247	-	88	96.067	ENSOCUG00000006286	-	100	96.067	Oryctolagus_cuniculus
ENSMLEG00000042247	-	99	76.238	ENSOMEG00000008210	rab13	99	76.238	Oryzias_melastigma
ENSMLEG00000042247	-	99	94.059	ENSOGAG00000016969	-	99	94.059	Otolemur_garnettii
ENSMLEG00000042247	-	100	100.000	ENSPPAG00000028435	-	100	100.000	Pan_paniscus
ENSMLEG00000042247	-	100	92.118	ENSPPRG00000008865	-	100	92.118	Panthera_pardus
ENSMLEG00000042247	-	100	100.000	ENSPTRG00000001370	RAB13	100	100.000	Pan_troglodytes
ENSMLEG00000042247	-	100	100.000	ENSPANG00000004479	-	100	100.000	Papio_anubis
ENSMLEG00000042247	-	99	75.743	ENSPMGG00000007680	rab13	99	75.743	Periophthalmus_magnuspinnatus
ENSMLEG00000042247	-	53	97.222	ENSPEMG00000017353	-	100	97.222	Peromyscus_maniculatus_bairdii
ENSMLEG00000042247	-	100	92.647	ENSPCIG00000029350	-	100	92.647	Phascolarctos_cinereus
ENSMLEG00000042247	-	95	74.112	ENSPLAG00000005832	RAB13	93	83.815	Poecilia_latipinna
ENSMLEG00000042247	-	90	80.328	ENSPREG00000017567	rab13	99	74.257	Poecilia_reticulata
ENSMLEG00000042247	-	100	100.000	ENSPPYG00000000790	-	100	100.000	Pongo_abelii
ENSMLEG00000042247	-	100	98.030	ENSPCOG00000012189	-	100	98.030	Propithecus_coquereli
ENSMLEG00000042247	-	100	95.074	ENSPVAG00000011095	-	100	95.074	Pteropus_vampyrus
ENSMLEG00000042247	-	85	86.127	ENSPNAG00000004189	rab13	92	86.127	Pygocentrus_nattereri
ENSMLEG00000042247	-	100	92.611	ENSRNOG00000016733	Rab13	100	92.611	Rattus_norvegicus
ENSMLEG00000042247	-	100	99.507	ENSRBIG00000008552	-	100	99.507	Rhinopithecus_bieti
ENSMLEG00000042247	-	100	99.507	ENSRROG00000036885	-	100	99.507	Rhinopithecus_roxellana
ENSMLEG00000042247	-	100	99.015	ENSSBOG00000020342	-	100	99.015	Saimiri_boliviensis_boliviensis
ENSMLEG00000042247	-	100	91.667	ENSSHAG00000011866	-	100	91.667	Sarcophilus_harrisii
ENSMLEG00000042247	-	100	98.522	ENSSSCG00000006564	-	100	98.522	Sus_scrofa
ENSMLEG00000042247	-	99	76.733	ENSTRUG00000024177	rab13	99	76.733	Takifugu_rubripes
ENSMLEG00000042247	-	100	97.044	ENSTBEG00000012734	-	100	97.044	Tupaia_belangeri
ENSMLEG00000042247	-	100	99.507	ENSTTRG00000011183	-	100	99.507	Tursiops_truncatus
ENSMLEG00000042247	-	71	81.944	ENSXETG00000020729	rab13	99	78.882	Xenopus_tropicalis
ENSMLEG00000042247	-	85	82.659	ENSXCOG00000019533	rab13	93	82.659	Xiphophorus_couchianus