EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000042428 (Gene tree)
Gene ID: 105532824
Gene Symbol: POLR1A
Alias: DKFZP586M0122|FLJ21915|RPA1|RPO1-4
Full Name: RNA polymerase I subunit A
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 85037 bases
Position: chrKN979371.1:96852-181888
Accession: 105532824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000036746	RNA_pol_Rpb1_5	PF04998.17	5.7e-104	1	1
ENSMLEP00000036746	RNA_pol_Rpb1_4	PF05000.17	1e-25	1	1
ENSMLEP00000036746	RNA_pol_Rpb1_2	PF00623.20	1.7e-70	1	1
ENSMLEP00000036746	RNA_pol_Rpb1_3	PF04983.18	6.4e-35	1	1
ENSMLEP00000036746	RNA_pol_Rpb1_1	PF04997.12	1.2e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000060349	POLR1A-201	5148	XM_011971117	ENSMLEP00000036746	1715 (aa)	XP_011826507	A0A2K6A9I7

Gene Model

Click here to download ENSMLEG00000042428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000042428's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000042428	POLR1A	63	30.120	ENSMLEG00000030014	POLR3A	69	30.120

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000042428	POLR1A	100	97.093	ENSG00000068654	POLR1A	100	97.093	Homo_sapiens
ENSMLEG00000042428	POLR1A	69	67.845	ENSAPOG00000017945	polr1a	99	68.182	Acanthochromis_polyacanthus
ENSMLEG00000042428	POLR1A	100	90.814	ENSAMEG00000005807	POLR1A	100	92.520	Ailuropoda_melanoleuca
ENSMLEG00000042428	POLR1A	100	62.899	ENSACIG00000022147	polr1a	100	62.920	Amphilophus_citrinellus
ENSMLEG00000042428	POLR1A	100	65.462	ENSAOCG00000017336	polr1a	100	68.003	Amphiprion_ocellaris
ENSMLEG00000042428	POLR1A	95	74.306	ENSAPEG00000016105	polr1a	98	74.306	Amphiprion_percula
ENSMLEG00000042428	POLR1A	100	66.243	ENSATEG00000016773	polr1a	100	65.434	Anabas_testudineus
ENSMLEG00000042428	POLR1A	86	72.629	ENSAPLG00000013871	POLR1A	99	72.629	Anas_platyrhynchos
ENSMLEG00000042428	POLR1A	99	69.240	ENSACAG00000012141	POLR1A	99	68.370	Anolis_carolinensis
ENSMLEG00000042428	POLR1A	100	94.419	ENSANAG00000033927	POLR1A	100	94.244	Aotus_nancymaae
ENSMLEG00000042428	POLR1A	100	61.924	ENSACLG00000020541	polr1a	100	61.335	Astatotilapia_calliptera
ENSMLEG00000042428	POLR1A	100	89.773	ENSBTAG00000006481	POLR1A	100	89.773	Bos_taurus
ENSMLEG00000042428	POLR1A	99	38.397	WBGene00012999	rpoa-1	98	38.055	Caenorhabditis_elegans
ENSMLEG00000042428	POLR1A	100	94.302	ENSCJAG00000019547	POLR1A	100	94.302	Callithrix_jacchus
ENSMLEG00000042428	POLR1A	100	90.424	ENSCAFG00000007613	POLR1A	100	90.296	Canis_familiaris
ENSMLEG00000042428	POLR1A	100	90.220	ENSCAFG00020014752	POLR1A	100	90.093	Canis_lupus_dingo
ENSMLEG00000042428	POLR1A	100	87.659	ENSCHIG00000018204	POLR1A	100	87.601	Capra_hircus
ENSMLEG00000042428	POLR1A	100	89.773	ENSTSYG00000002761	POLR1A	100	89.309	Carlito_syrichta
ENSMLEG00000042428	POLR1A	97	83.721	ENSCAPG00000010132	POLR1A	100	83.393	Cavia_aperea
ENSMLEG00000042428	POLR1A	100	88.269	ENSCPOG00000012350	POLR1A	100	88.095	Cavia_porcellus
ENSMLEG00000042428	POLR1A	100	94.709	ENSCCAG00000019839	POLR1A	100	94.709	Cebus_capucinus
ENSMLEG00000042428	POLR1A	100	99.128	ENSCATG00000029786	POLR1A	100	99.128	Cercocebus_atys
ENSMLEG00000042428	POLR1A	100	88.754	ENSCLAG00000005187	POLR1A	100	88.290	Chinchilla_lanigera
ENSMLEG00000042428	POLR1A	100	98.779	ENSCSAG00000016251	POLR1A	100	98.779	Chlorocebus_sabaeus
ENSMLEG00000042428	POLR1A	99	73.868	ENSCPBG00000001115	POLR1A	99	73.852	Chrysemys_picta_bellii
ENSMLEG00000042428	POLR1A	99	46.781	ENSCSAVG00000007184	-	91	54.591	Ciona_savignyi
ENSMLEG00000042428	POLR1A	100	95.526	ENSCANG00000031785	POLR1A	100	95.526	Colobus_angolensis_palliatus
ENSMLEG00000042428	POLR1A	100	82.207	ENSCGRG00001006651	Polr1a	100	82.455	Cricetulus_griseus_chok1gshd
ENSMLEG00000042428	POLR1A	60	85.260	ENSCGRG00000010834	Polr1a	100	85.687	Cricetulus_griseus_crigri
ENSMLEG00000042428	POLR1A	100	61.971	ENSCSEG00000020190	polr1a	100	61.775	Cynoglossus_semilaevis
ENSMLEG00000042428	POLR1A	100	64.078	ENSCVAG00000020941	polr1a	100	64.757	Cyprinodon_variegatus
ENSMLEG00000042428	POLR1A	100	66.744	ENSDARG00000098375	polr1a	100	66.879	Danio_rerio
ENSMLEG00000042428	POLR1A	100	82.609	ENSDNOG00000010829	POLR1A	100	82.667	Dasypus_novemcinctus
ENSMLEG00000042428	POLR1A	100	87.276	ENSDORG00000008298	Polr1a	100	87.102	Dipodomys_ordii
ENSMLEG00000042428	POLR1A	80	44.126	FBgn0019938	RpI1	99	42.774	Drosophila_melanogaster
ENSMLEG00000042428	POLR1A	72	100.000	ENSETEG00000000412	-	72	100.000	Echinops_telfairi
ENSMLEG00000042428	POLR1A	88	66.667	ENSEBUG00000005667	-	99	66.667	Eptatretus_burgeri
ENSMLEG00000042428	POLR1A	100	91.802	ENSEASG00005001625	POLR1A	100	91.802	Equus_asinus_asinus
ENSMLEG00000042428	POLR1A	100	91.802	ENSECAG00000030510	-	100	93.347	Equus_caballus
ENSMLEG00000042428	POLR1A	100	91.802	ENSECAG00000036306	-	100	93.347	Equus_caballus
ENSMLEG00000042428	POLR1A	100	91.802	ENSECAG00000010092	POLR1A	100	93.347	Equus_caballus
ENSMLEG00000042428	POLR1A	81	94.681	ENSEEUG00000000676	POLR1A	81	94.444	Erinaceus_europaeus
ENSMLEG00000042428	POLR1A	100	66.570	ENSELUG00000012769	polr1a	99	66.512	Esox_lucius
ENSMLEG00000042428	POLR1A	100	91.279	ENSFCAG00000008966	POLR1A	100	91.105	Felis_catus
ENSMLEG00000042428	POLR1A	99	70.850	ENSFALG00000010082	POLR1A	99	70.667	Ficedula_albicollis
ENSMLEG00000042428	POLR1A	100	88.502	ENSFDAG00000013726	POLR1A	100	87.747	Fukomys_damarensis
ENSMLEG00000042428	POLR1A	100	61.681	ENSFHEG00000005996	polr1a	100	61.503	Fundulus_heteroclitus
ENSMLEG00000042428	POLR1A	100	59.489	ENSGMOG00000002230	polr1a	100	59.513	Gadus_morhua
ENSMLEG00000042428	POLR1A	90	68.915	ENSGALG00000038160	-	99	68.465	Gallus_gallus
ENSMLEG00000042428	POLR1A	100	64.406	ENSGAFG00000015266	polr1a	100	64.988	Gambusia_affinis
ENSMLEG00000042428	POLR1A	100	64.879	ENSGACG00000018791	polr1a	100	64.879	Gasterosteus_aculeatus
ENSMLEG00000042428	POLR1A	89	74.337	ENSGAGG00000004984	-	96	80.405	Gopherus_agassizii
ENSMLEG00000042428	POLR1A	100	97.151	ENSGGOG00000001788	POLR1A	100	97.151	Gorilla_gorilla
ENSMLEG00000042428	POLR1A	90	64.257	ENSHBUG00000020021	polr1a	99	64.457	Haplochromis_burtoni
ENSMLEG00000042428	POLR1A	100	88.502	ENSHGLG00000006334	POLR1A	100	88.328	Heterocephalus_glaber_female
ENSMLEG00000042428	POLR1A	100	88.246	ENSHGLG00100006614	POLR1A	100	88.072	Heterocephalus_glaber_male
ENSMLEG00000042428	POLR1A	100	61.804	ENSHCOG00000003345	polr1a	100	61.445	Hippocampus_comes
ENSMLEG00000042428	POLR1A	100	65.761	ENSIPUG00000013174	polr1a	100	64.974	Ictalurus_punctatus
ENSMLEG00000042428	POLR1A	99	87.144	ENSSTOG00000012580	POLR1A	99	86.795	Ictidomys_tridecemlineatus
ENSMLEG00000042428	POLR1A	100	86.957	ENSJJAG00000013113	Polr1a	100	86.783	Jaculus_jaculus
ENSMLEG00000042428	POLR1A	100	65.835	ENSKMAG00000007399	polr1a	100	65.313	Kryptolebias_marmoratus
ENSMLEG00000042428	POLR1A	95	67.880	ENSLBEG00000015401	polr1a	99	67.225	Labrus_bergylta
ENSMLEG00000042428	POLR1A	53	76.170	ENSLACG00000003218	polr1a	100	76.170	Latimeria_chalumnae
ENSMLEG00000042428	POLR1A	100	70.242	ENSLOCG00000010881	polr1a	100	70.242	Lepisosteus_oculatus
ENSMLEG00000042428	POLR1A	100	89.236	ENSLAFG00000014948	POLR1A	100	89.352	Loxodonta_africana
ENSMLEG00000042428	POLR1A	100	99.070	ENSMFAG00000046097	POLR1A	100	99.070	Macaca_fascicularis
ENSMLEG00000042428	POLR1A	100	99.012	ENSMMUG00000015815	POLR1A	100	99.012	Macaca_mulatta
ENSMLEG00000042428	POLR1A	100	99.012	ENSMNEG00000043313	POLR1A	100	99.012	Macaca_nemestrina
ENSMLEG00000042428	POLR1A	100	65.511	ENSMAMG00000016565	polr1a	100	65.757	Mastacembelus_armatus
ENSMLEG00000042428	POLR1A	100	65.527	ENSMZEG00005004915	polr1a	100	65.046	Maylandia_zebra
ENSMLEG00000042428	POLR1A	99	68.754	ENSMGAG00000013111	POLR1A	99	68.348	Meleagris_gallopavo
ENSMLEG00000042428	POLR1A	92	86.578	ENSMAUG00000008497	Polr1a	100	86.924	Mesocricetus_auratus
ENSMLEG00000042428	POLR1A	100	92.040	ENSMICG00000000757	POLR1A	100	91.749	Microcebus_murinus
ENSMLEG00000042428	POLR1A	100	86.682	ENSMOCG00000000122	Polr1a	100	86.624	Microtus_ochrogaster
ENSMLEG00000042428	POLR1A	100	65.003	ENSMMOG00000010216	polr1a	100	64.750	Mola_mola
ENSMLEG00000042428	POLR1A	100	74.856	ENSMODG00000009335	POLR1A	100	74.455	Monodelphis_domestica
ENSMLEG00000042428	POLR1A	100	65.683	ENSMALG00000013363	polr1a	100	65.210	Monopterus_albus
ENSMLEG00000042428	POLR1A	100	85.104	MGP_CAROLIEiJ_G0028494	Polr1a	100	85.003	Mus_caroli
ENSMLEG00000042428	POLR1A	100	85.640	ENSMUSG00000049553	Polr1a	100	85.292	Mus_musculus
ENSMLEG00000042428	POLR1A	100	86.161	MGP_PahariEiJ_G0022230	Polr1a	100	85.814	Mus_pahari
ENSMLEG00000042428	POLR1A	100	84.339	MGP_SPRETEiJ_G0029499	Polr1a	100	84.132	Mus_spretus
ENSMLEG00000042428	POLR1A	100	90.523	ENSMPUG00000009135	POLR1A	100	90.465	Mustela_putorius_furo
ENSMLEG00000042428	POLR1A	100	89.474	ENSMLUG00000015723	POLR1A	100	89.127	Myotis_lucifugus
ENSMLEG00000042428	POLR1A	100	87.125	ENSNGAG00000017907	Polr1a	100	87.500	Nannospalax_galili
ENSMLEG00000042428	POLR1A	100	64.879	ENSNBRG00000000519	polr1a	100	65.240	Neolamprologus_brichardi
ENSMLEG00000042428	POLR1A	100	94.850	ENSNLEG00000002264	POLR1A	100	94.850	Nomascus_leucogenys
ENSMLEG00000042428	POLR1A	75	93.701	ENSMEUG00000011665	-	75	93.701	Notamacropus_eugenii
ENSMLEG00000042428	POLR1A	99	82.336	ENSOPRG00000008269	POLR1A	100	82.218	Ochotona_princeps
ENSMLEG00000042428	POLR1A	100	89.024	ENSODEG00000003542	POLR1A	100	88.560	Octodon_degus
ENSMLEG00000042428	POLR1A	100	65.837	ENSONIG00000015895	polr1a	100	65.837	Oreochromis_niloticus
ENSMLEG00000042428	POLR1A	100	90.529	ENSOCUG00000010138	POLR1A	100	90.529	Oryctolagus_cuniculus
ENSMLEG00000042428	POLR1A	100	64.988	ENSORLG00000008753	polr1a	99	64.621	Oryzias_latipes
ENSMLEG00000042428	POLR1A	100	64.170	ENSORLG00020020726	polr1a	99	63.451	Oryzias_latipes_hni
ENSMLEG00000042428	POLR1A	96	75.532	ENSORLG00015016071	polr1a	99	75.556	Oryzias_latipes_hsok
ENSMLEG00000042428	POLR1A	100	90.756	ENSOGAG00000004031	POLR1A	100	90.756	Otolemur_garnettii
ENSMLEG00000042428	POLR1A	100	89.089	ENSOARG00000020601	POLR1A	100	89.147	Ovis_aries
ENSMLEG00000042428	POLR1A	100	96.860	ENSPPAG00000042450	POLR1A	100	96.860	Pan_paniscus
ENSMLEG00000042428	POLR1A	100	91.570	ENSPPRG00000006702	POLR1A	100	91.221	Panthera_pardus
ENSMLEG00000042428	POLR1A	100	91.020	ENSPTIG00000018783	POLR1A	100	90.672	Panthera_tigris_altaica
ENSMLEG00000042428	POLR1A	100	96.860	ENSPTRG00000012147	POLR1A	100	96.860	Pan_troglodytes
ENSMLEG00000042428	POLR1A	100	99.012	ENSPANG00000025908	POLR1A	100	99.012	Papio_anubis
ENSMLEG00000042428	POLR1A	94	77.083	ENSPKIG00000005468	polr1a	99	77.083	Paramormyrops_kingsleyae
ENSMLEG00000042428	POLR1A	63	69.964	ENSPSIG00000009321	-	99	70.156	Pelodiscus_sinensis
ENSMLEG00000042428	POLR1A	55	68.342	ENSPMGG00000009718	polr1a	95	68.342	Periophthalmus_magnuspinnatus
ENSMLEG00000042428	POLR1A	83	89.566	ENSPEMG00000022224	Polr1a	100	87.493	Peromyscus_maniculatus_bairdii
ENSMLEG00000042428	POLR1A	95	79.040	ENSPCIG00000004222	POLR1A	99	79.088	Phascolarctos_cinereus
ENSMLEG00000042428	POLR1A	100	65.162	ENSPFOG00000005025	polr1a	100	65.104	Poecilia_formosa
ENSMLEG00000042428	POLR1A	100	65.567	ENSPLAG00000021389	polr1a	100	65.278	Poecilia_latipinna
ENSMLEG00000042428	POLR1A	100	63.368	ENSPMEG00000006463	polr1a	100	63.678	Poecilia_mexicana
ENSMLEG00000042428	POLR1A	100	65.238	ENSPREG00000002389	polr1a	100	65.200	Poecilia_reticulata
ENSMLEG00000042428	POLR1A	100	96.279	ENSPPYG00000012217	POLR1A	100	96.279	Pongo_abelii
ENSMLEG00000042428	POLR1A	88	96.000	ENSPCAG00000011582	POLR1A	88	96.000	Procavia_capensis
ENSMLEG00000042428	POLR1A	100	91.865	ENSPCOG00000026987	POLR1A	100	91.749	Propithecus_coquereli
ENSMLEG00000042428	POLR1A	95	91.912	ENSPVAG00000012674	POLR1A	95	91.166	Pteropus_vampyrus
ENSMLEG00000042428	POLR1A	100	65.527	ENSPNYG00000000026	polr1a	100	65.046	Pundamilia_nyererei
ENSMLEG00000042428	POLR1A	100	66.821	ENSPNAG00000019223	polr1a	99	67.279	Pygocentrus_nattereri
ENSMLEG00000042428	POLR1A	100	87.551	ENSRNOG00000009545	Polr1a	100	87.203	Rattus_norvegicus
ENSMLEG00000042428	POLR1A	100	97.965	ENSRBIG00000028335	POLR1A	100	97.965	Rhinopithecus_bieti
ENSMLEG00000042428	POLR1A	100	97.907	ENSRROG00000031473	POLR1A	100	97.907	Rhinopithecus_roxellana
ENSMLEG00000042428	POLR1A	99	37.010	YOR341W	RPA190	99	36.872	Saccharomyces_cerevisiae
ENSMLEG00000042428	POLR1A	100	93.895	ENSSBOG00000030262	POLR1A	100	93.895	Saimiri_boliviensis_boliviensis
ENSMLEG00000042428	POLR1A	100	73.718	ENSSHAG00000014739	POLR1A	100	73.307	Sarcophilus_harrisii
ENSMLEG00000042428	POLR1A	100	67.361	ENSSFOG00015019716	polr1a	100	66.667	Scleropages_formosus
ENSMLEG00000042428	POLR1A	100	66.204	ENSSMAG00000014342	polr1a	100	65.489	Scophthalmus_maximus
ENSMLEG00000042428	POLR1A	100	66.034	ENSSDUG00000014631	polr1a	100	66.474	Seriola_dumerili
ENSMLEG00000042428	POLR1A	100	63.982	ENSSLDG00000024095	polr1a	100	64.464	Seriola_lalandi_dorsalis
ENSMLEG00000042428	POLR1A	75	97.872	ENSSARG00000003136	-	76	97.872	Sorex_araneus
ENSMLEG00000042428	POLR1A	94	78.974	ENSSPUG00000004215	POLR1A	98	78.974	Sphenodon_punctatus
ENSMLEG00000042428	POLR1A	64	72.222	ENSSPAG00000016341	polr1a	94	72.222	Stegastes_partitus
ENSMLEG00000042428	POLR1A	83	91.030	ENSSSCG00000008226	POLR1A	99	91.005	Sus_scrofa
ENSMLEG00000042428	POLR1A	99	70.000	ENSTGUG00000010704	POLR1A	100	70.059	Taeniopygia_guttata
ENSMLEG00000042428	POLR1A	100	63.809	ENSTRUG00000002210	polr1a	99	63.364	Takifugu_rubripes
ENSMLEG00000042428	POLR1A	100	60.150	ENSTNIG00000010116	polr1a	100	60.012	Tetraodon_nigroviridis
ENSMLEG00000042428	POLR1A	74	97.345	ENSTBEG00000008646	POLR1A	70	100.000	Tupaia_belangeri
ENSMLEG00000042428	POLR1A	100	86.047	ENSTTRG00000008597	POLR1A	100	85.640	Tursiops_truncatus
ENSMLEG00000042428	POLR1A	69	90.871	ENSUAMG00000012158	-	94	90.279	Ursus_americanus
ENSMLEG00000042428	POLR1A	100	90.000	ENSUMAG00000006700	POLR1A	100	89.767	Ursus_maritimus
ENSMLEG00000042428	POLR1A	100	90.250	ENSVVUG00000001245	POLR1A	100	90.122	Vulpes_vulpes
ENSMLEG00000042428	POLR1A	100	67.206	ENSXETG00000001952	polr1a	100	68.627	Xenopus_tropicalis
ENSMLEG00000042428	POLR1A	100	65.298	ENSXMAG00000004032	polr1a	100	65.240	Xiphophorus_maculatus