EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000042907 (Gene tree)
Gene ID: 105537224
Gene Symbol: -
Alias: -
Full Name: ATP-dependent RNA helicase DDX19B-like
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 43277 bases
Position: chrKN973762.1:5668451-5711727
Accession: 105537224
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000037756	DEAD	PF00270.29	1.8e-28	1	1
ENSMLEP00000037747	DEAD	PF00270.29	1.9e-28	1	1
ENSMLEP00000037732	DEAD	PF00270.29	2e-28	1	1
ENSMLEP00000037728	DEAD	PF00270.29	2e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000061337	-	1413	XM_011976780	ENSMLEP00000037728	470 (aa)	XP_011832170	A0A2K6ACK0
ENSMLET00000061365	-	1377	XM_011976781	ENSMLEP00000037756	458 (aa)	XP_011832171	A0A2K6ACE9
ENSMLET00000061341	-	1416	-	ENSMLEP00000037732	471 (aa)	-	A0A2K6ACF1
ENSMLET00000061356	-	1407	-	ENSMLEP00000037747	468 (aa)	-	A0A2K6ACG4

Gene Model

Click here to download ENSMLEG00000042907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000042907's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000042907	-	83	40.000	ENSMLEG00000030242	-	94	40.000
ENSMLEG00000042907	-	77	36.769	ENSMLEG00000032948	EIF4A3	98	36.769
ENSMLEG00000042907	-	76	31.549	ENSMLEG00000040863	-	87	31.549
ENSMLEG00000042907	-	74	39.266	ENSMLEG00000018653	-	93	40.437
ENSMLEG00000042907	-	81	40.576	ENSMLEG00000032647	EIF4A1	91	40.576
ENSMLEG00000042907	-	84	32.242	ENSMLEG00000007602	DDX39A	90	32.824
ENSMLEG00000042907	-	100	93.333	ENSMLEG00000030395	DDX19A	100	93.333
ENSMLEG00000042907	-	80	35.733	ENSMLEG00000028151	DDX6	76	35.263
ENSMLEG00000042907	-	85	33.584	ENSMLEG00000043791	DDX39B	91	33.584
ENSMLEG00000042907	-	76	30.769	ENSMLEG00000043591	DDX56	56	48.333
ENSMLEG00000042907	-	91	69.121	ENSMLEG00000041703	DDX25	87	69.121
ENSMLEG00000042907	-	79	30.711	ENSMLEG00000044178	DDX3X	58	30.670
ENSMLEG00000042907	-	77	30.105	ENSMLEG00000041961	DDX43	56	30.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000042907	-	53	95.210	ENSETEG00000002459	-	58	89.604	Echinops_telfairi
ENSMLEG00000042907	-	79	70.447	ENSEEUG00000004407	-	79	70.790	Erinaceus_europaeus
ENSMLEG00000042907	-	100	71.339	ENSMNEG00000040748	-	100	71.310	Macaca_nemestrina
ENSMLEG00000042907	-	100	59.792	ENSMPUG00000010211	-	100	59.792	Mustela_putorius_furo
ENSMLEG00000042907	-	93	84.282	ENSMEUG00000012215	-	99	84.282	Notamacropus_eugenii
ENSMLEG00000042907	-	94	63.492	ENSOCUG00000008886	-	100	62.667	Oryctolagus_cuniculus
ENSMLEG00000042907	-	100	87.738	ENSPANG00000018646	-	100	87.738	Papio_anubis
ENSMLEG00000042907	-	100	73.805	ENSSBOG00000034490	-	100	73.805	Saimiri_boliviensis_boliviensis