EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLEG00000043010 (Gene tree)
Gene ID: 105536326
Gene Symbol: CPSF1
Alias: CPSF160
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 25704 bases
Position: chrKN973629.1:2015739-2041442
Accession: 105536326
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000037940	CPSF_A	PF03178.15	9.7e-92	1	1
ENSMLEP00000037921	CPSF_A	PF03178.15	1e-91	1	1
ENSMLEP00000037938	CPSF_A	PF03178.15	1e-91	1	1
ENSMLEP00000037967	CPSF_A	PF03178.15	1.7e-79	1	1
ENSMLEP00000037955	CPSF_A	PF03178.15	4e-70	1	1
ENSMLEP00000037971	CPSF_A	PF03178.15	2.1e-33	1	1
ENSMLEP00000037973	CPSF_A	PF03178.15	2.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000061549	CPSF1-203	4329	-	ENSMLEP00000037940	1442 (aa)	-	A0A2K6AD15
ENSMLET00000061564	CPSF1-204	4248	-	ENSMLEP00000037955	1415 (aa)	-	A0A2K6AD35
ENSMLET00000061547	CPSF1-202	4383	XM_011975698	ENSMLEP00000037938	1460 (aa)	XP_011831088	A0A2K6AD50
ENSMLET00000061576	CPSF1-205	3339	-	ENSMLEP00000037967	1112 (aa)	-	A0A2K6AD29
ENSMLET00000061579	CPSF1-206	615	-	ENSMLEP00000037971	204 (aa)	-	A0A2K6AD16
ENSMLET00000061582	CPSF1-207	813	-	ENSMLEP00000037973	270 (aa)	-	A0A2K6AD84
ENSMLET00000061530	CPSF1-201	4365	-	ENSMLEP00000037921	1454 (aa)	-	A0A2K6ACW6

Gene Model

Click here to download ENSMLEG00000043010's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000043010's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000043010	CPSF1	100	99.168	ENSG00000071894	CPSF1	100	99.168	Homo_sapiens
ENSMLEG00000043010	CPSF1	100	80.556	ENSAPOG00000019621	cpsf1	100	77.905	Acanthochromis_polyacanthus
ENSMLEG00000043010	CPSF1	97	94.711	ENSAMEG00000005557	CPSF1	100	94.711	Ailuropoda_melanoleuca
ENSMLEG00000043010	CPSF1	100	80.093	ENSACIG00000006112	cpsf1	100	77.855	Amphilophus_citrinellus
ENSMLEG00000043010	CPSF1	100	80.556	ENSAOCG00000007120	cpsf1	100	79.103	Amphiprion_ocellaris
ENSMLEG00000043010	CPSF1	100	80.556	ENSAPEG00000005755	cpsf1	100	79.394	Amphiprion_percula
ENSMLEG00000043010	CPSF1	100	80.093	ENSATEG00000011097	cpsf1	100	77.950	Anabas_testudineus
ENSMLEG00000043010	CPSF1	90	88.955	ENSACAG00000009655	CPSF1	100	81.548	Anolis_carolinensis
ENSMLEG00000043010	CPSF1	100	98.821	ENSANAG00000036514	CPSF1	100	98.821	Aotus_nancymaae
ENSMLEG00000043010	CPSF1	100	79.167	ENSACLG00000012231	cpsf1	99	78.551	Astatotilapia_calliptera
ENSMLEG00000043010	CPSF1	100	79.630	ENSAMXG00000008485	cpsf1	100	74.015	Astyanax_mexicanus
ENSMLEG00000043010	CPSF1	99	96.154	ENSBTAG00000008355	CPSF1	100	94.672	Bos_taurus
ENSMLEG00000043010	CPSF1	99	33.333	WBGene00022301	cpsf-1	100	40.282	Caenorhabditis_elegans
ENSMLEG00000043010	CPSF1	100	98.752	ENSCJAG00000021421	CPSF1	100	98.752	Callithrix_jacchus
ENSMLEG00000043010	CPSF1	97	96.140	ENSCAFG00000001600	CPSF1	100	96.480	Canis_familiaris
ENSMLEG00000043010	CPSF1	100	96.332	ENSCAFG00020020821	CPSF1	100	96.332	Canis_lupus_dingo
ENSMLEG00000043010	CPSF1	99	95.562	ENSCHIG00000015833	CPSF1	100	90.852	Capra_hircus
ENSMLEG00000043010	CPSF1	99	98.806	ENSTSYG00000028560	CPSF1	100	97.712	Carlito_syrichta
ENSMLEG00000043010	CPSF1	97	95.054	ENSCAPG00000014921	CPSF1	99	95.054	Cavia_aperea
ENSMLEG00000043010	CPSF1	100	94.802	ENSCPOG00000011448	CPSF1	100	94.802	Cavia_porcellus
ENSMLEG00000043010	CPSF1	100	98.890	ENSCCAG00000037658	CPSF1	100	98.890	Cebus_capucinus
ENSMLEG00000043010	CPSF1	100	100.000	ENSCATG00000037234	CPSF1	100	100.000	Cercocebus_atys
ENSMLEG00000043010	CPSF1	99	97.612	ENSCLAG00000012166	CPSF1	100	96.533	Chinchilla_lanigera
ENSMLEG00000043010	CPSF1	100	99.723	ENSCSAG00000008502	CPSF1	100	99.723	Chlorocebus_sabaeus
ENSMLEG00000043010	CPSF1	99	87.334	ENSCPBG00000018910	CPSF1	96	87.334	Chrysemys_picta_bellii
ENSMLEG00000043010	CPSF1	93	54.819	ENSCING00000000514	-	100	48.422	Ciona_intestinalis
ENSMLEG00000043010	CPSF1	99	51.632	ENSCSAVG00000002293	-	98	49.765	Ciona_savignyi
ENSMLEG00000043010	CPSF1	100	99.020	ENSCANG00000032760	CPSF1	100	99.020	Colobus_angolensis_palliatus
ENSMLEG00000043010	CPSF1	100	96.394	ENSCGRG00001016344	Cpsf1	100	96.394	Cricetulus_griseus_chok1gshd
ENSMLEG00000043010	CPSF1	100	97.313	ENSCGRG00000003118	Cpsf1	100	94.313	Cricetulus_griseus_crigri
ENSMLEG00000043010	CPSF1	100	77.509	ENSCSEG00000013464	cpsf1	100	77.301	Cynoglossus_semilaevis
ENSMLEG00000043010	CPSF1	100	81.463	ENSCVAG00000014059	cpsf1	100	81.463	Cyprinodon_variegatus
ENSMLEG00000043010	CPSF1	99	81.493	ENSDARG00000034178	cpsf1	100	79.890	Danio_rerio
ENSMLEG00000043010	CPSF1	57	95.652	ENSDNOG00000043654	CPSF1	94	95.652	Dasypus_novemcinctus
ENSMLEG00000043010	CPSF1	97	95.842	ENSDORG00000006278	Cpsf1	99	95.842	Dipodomys_ordii
ENSMLEG00000043010	CPSF1	98	55.202	FBgn0024698	Cpsf160	100	45.393	Drosophila_melanogaster
ENSMLEG00000043010	CPSF1	81	97.315	ENSETEG00000006022	CPSF1	83	97.315	Echinops_telfairi
ENSMLEG00000043010	CPSF1	90	62.245	ENSEBUG00000006844	-	97	74.541	Eptatretus_burgeri
ENSMLEG00000043010	CPSF1	100	97.024	ENSEASG00005010774	CPSF1	100	97.024	Equus_asinus_asinus
ENSMLEG00000043010	CPSF1	100	97.024	ENSECAG00000022209	CPSF1	100	97.024	Equus_caballus
ENSMLEG00000043010	CPSF1	100	94.671	ENSEEUG00000000471	CPSF1	100	94.671	Erinaceus_europaeus
ENSMLEG00000043010	CPSF1	100	79.630	ENSELUG00000012271	cpsf1	100	78.562	Esox_lucius
ENSMLEG00000043010	CPSF1	100	96.533	ENSFDAG00000016060	CPSF1	100	96.533	Fukomys_damarensis
ENSMLEG00000043010	CPSF1	99	78.806	ENSFHEG00000016801	cpsf1	100	76.584	Fundulus_heteroclitus
ENSMLEG00000043010	CPSF1	100	78.704	ENSGMOG00000000796	cpsf1	100	78.069	Gadus_morhua
ENSMLEG00000043010	CPSF1	97	88.235	ENSGAFG00000018890	cpsf1	100	88.235	Gambusia_affinis
ENSMLEG00000043010	CPSF1	100	78.704	ENSGACG00000008703	cpsf1	100	78.404	Gasterosteus_aculeatus
ENSMLEG00000043010	CPSF1	99	88.358	ENSGAGG00000004276	CPSF1	98	87.416	Gopherus_agassizii
ENSMLEG00000043010	CPSF1	100	99.307	ENSGGOG00000016185	CPSF1	100	99.307	Gorilla_gorilla
ENSMLEG00000043010	CPSF1	100	62.745	ENSGGOG00000040487	-	100	70.833	Gorilla_gorilla
ENSMLEG00000043010	CPSF1	100	79.516	ENSHBUG00000018900	cpsf1	100	79.239	Haplochromis_burtoni
ENSMLEG00000043010	CPSF1	100	96.394	ENSHGLG00000016139	CPSF1	100	96.394	Heterocephalus_glaber_female
ENSMLEG00000043010	CPSF1	100	96.325	ENSHGLG00100009750	CPSF1	100	96.325	Heterocephalus_glaber_male
ENSMLEG00000043010	CPSF1	100	77.778	ENSHCOG00000018509	cpsf1	100	76.866	Hippocampus_comes
ENSMLEG00000043010	CPSF1	100	80.093	ENSIPUG00000011259	cpsf1	100	76.632	Ictalurus_punctatus
ENSMLEG00000043010	CPSF1	97	96.429	ENSSTOG00000009957	CPSF1	99	96.429	Ictidomys_tridecemlineatus
ENSMLEG00000043010	CPSF1	99	97.612	ENSJJAG00000023002	Cpsf1	100	96.186	Jaculus_jaculus
ENSMLEG00000043010	CPSF1	91	85.893	ENSKMAG00000001940	cpsf1	99	85.893	Kryptolebias_marmoratus
ENSMLEG00000043010	CPSF1	99	80.299	ENSLBEG00000003601	cpsf1	100	77.617	Labrus_bergylta
ENSMLEG00000043010	CPSF1	100	82.407	ENSLACG00000000233	CPSF1	92	81.370	Latimeria_chalumnae
ENSMLEG00000043010	CPSF1	100	81.651	ENSLOCG00000008484	cpsf1	100	78.330	Lepisosteus_oculatus
ENSMLEG00000043010	CPSF1	97	95.279	ENSLAFG00000022601	CPSF1	100	95.279	Loxodonta_africana
ENSMLEG00000043010	CPSF1	100	100.000	ENSMFAG00000037013	CPSF1	100	100.000	Macaca_fascicularis
ENSMLEG00000043010	CPSF1	100	100.000	ENSMMUG00000007380	CPSF1	100	100.000	Macaca_mulatta
ENSMLEG00000043010	CPSF1	100	100.000	ENSMNEG00000043564	CPSF1	100	100.000	Macaca_nemestrina
ENSMLEG00000043010	CPSF1	100	80.093	ENSMAMG00000003803	cpsf1	100	78.311	Mastacembelus_armatus
ENSMLEG00000043010	CPSF1	100	79.167	ENSMZEG00005001168	cpsf1	100	77.163	Maylandia_zebra
ENSMLEG00000043010	CPSF1	99	97.313	ENSMAUG00000003601	Cpsf1	100	96.255	Mesocricetus_auratus
ENSMLEG00000043010	CPSF1	100	97.365	ENSMICG00000015767	CPSF1	100	97.365	Microcebus_murinus
ENSMLEG00000043010	CPSF1	100	96.394	ENSMOCG00000022758	Cpsf1	100	96.394	Microtus_ochrogaster
ENSMLEG00000043010	CPSF1	100	78.838	ENSMMOG00000021245	cpsf1	100	78.838	Mola_mola
ENSMLEG00000043010	CPSF1	100	93.034	ENSMODG00000010755	CPSF1	100	93.034	Monodelphis_domestica
ENSMLEG00000043010	CPSF1	100	79.167	ENSMALG00000020545	cpsf1	100	77.537	Monopterus_albus
ENSMLEG00000043010	CPSF1	99	97.612	MGP_CAROLIEiJ_G0019936	Cpsf1	100	96.463	Mus_caroli
ENSMLEG00000043010	CPSF1	99	97.612	ENSMUSG00000034022	Cpsf1	100	96.394	Mus_musculus
ENSMLEG00000043010	CPSF1	99	97.910	MGP_PahariEiJ_G0019946	Cpsf1	100	96.394	Mus_pahari
ENSMLEG00000043010	CPSF1	99	97.612	MGP_SPRETEiJ_G0020839	Cpsf1	100	96.394	Mus_spretus
ENSMLEG00000043010	CPSF1	94	95.630	ENSMPUG00000006419	CPSF1	93	95.630	Mustela_putorius_furo
ENSMLEG00000043010	CPSF1	78	97.484	ENSMLUG00000000667	-	100	96.667	Myotis_lucifugus
ENSMLEG00000043010	CPSF1	99	97.313	ENSNGAG00000022460	Cpsf1	100	96.186	Nannospalax_galili
ENSMLEG00000043010	CPSF1	100	79.167	ENSNBRG00000000813	cpsf1	100	75.035	Neolamprologus_brichardi
ENSMLEG00000043010	CPSF1	100	99.020	ENSNLEG00000010633	-	100	99.020	Nomascus_leucogenys
ENSMLEG00000043010	CPSF1	84	96.512	ENSMEUG00000014922	CPSF1	85	96.512	Notamacropus_eugenii
ENSMLEG00000043010	CPSF1	61	96.939	ENSOPRG00000004693	-	71	96.939	Ochotona_princeps
ENSMLEG00000043010	CPSF1	100	96.671	ENSODEG00000013995	CPSF1	100	96.671	Octodon_degus
ENSMLEG00000043010	CPSF1	100	79.723	ENSONIG00000007676	cpsf1	100	79.516	Oreochromis_niloticus
ENSMLEG00000043010	CPSF1	58	91.429	ENSOANG00000010716	CPSF1	88	91.429	Ornithorhynchus_anatinus
ENSMLEG00000043010	CPSF1	99	78.806	ENSORLG00000013544	cpsf1	92	87.243	Oryzias_latipes
ENSMLEG00000043010	CPSF1	99	79.104	ENSORLG00020021693	cpsf1	92	87.243	Oryzias_latipes_hni
ENSMLEG00000043010	CPSF1	99	79.104	ENSORLG00015009979	cpsf1	100	77.498	Oryzias_latipes_hsok
ENSMLEG00000043010	CPSF1	99	79.104	ENSOMEG00000011849	cpsf1	100	77.400	Oryzias_melastigma
ENSMLEG00000043010	CPSF1	100	97.434	ENSOGAG00000000315	CPSF1	100	97.434	Otolemur_garnettii
ENSMLEG00000043010	CPSF1	63	98.113	ENSOARG00000013594	-	89	92.063	Ovis_aries
ENSMLEG00000043010	CPSF1	100	99.376	ENSPPAG00000019280	CPSF1	100	99.376	Pan_paniscus
ENSMLEG00000043010	CPSF1	100	99.376	ENSPTRG00000049288	-	100	99.376	Pan_troglodytes
ENSMLEG00000043010	CPSF1	100	61.765	ENSPTRG00000052516	-	100	69.444	Pan_troglodytes
ENSMLEG00000043010	CPSF1	100	99.020	ENSPTRG00000051253	-	100	99.020	Pan_troglodytes
ENSMLEG00000043010	CPSF1	100	99.510	ENSPANG00000015005	CPSF1	100	99.857	Papio_anubis
ENSMLEG00000043010	CPSF1	100	81.481	ENSPKIG00000002582	cpsf1	100	80.895	Paramormyrops_kingsleyae
ENSMLEG00000043010	CPSF1	100	75.926	ENSPMGG00000022177	-	100	84.259	Periophthalmus_magnuspinnatus
ENSMLEG00000043010	CPSF1	100	92.966	ENSPCIG00000009035	CPSF1	100	92.966	Phascolarctos_cinereus
ENSMLEG00000043010	CPSF1	99	77.910	ENSPFOG00000012870	cpsf1	100	76.252	Poecilia_formosa
ENSMLEG00000043010	CPSF1	99	77.612	ENSPREG00000016307	cpsf1	100	75.997	Poecilia_reticulata
ENSMLEG00000043010	CPSF1	94	99.273	ENSPPYG00000018973	CPSF1	100	90.915	Pongo_abelii
ENSMLEG00000043010	CPSF1	91	94.886	ENSPCAG00000011541	CPSF1	94	94.886	Procavia_capensis
ENSMLEG00000043010	CPSF1	99	97.910	ENSPCOG00000020001	CPSF1	100	95.098	Propithecus_coquereli
ENSMLEG00000043010	CPSF1	91	98.571	ENSPVAG00000006761	CPSF1	91	98.571	Pteropus_vampyrus
ENSMLEG00000043010	CPSF1	100	79.167	ENSPNYG00000004906	cpsf1	100	78.210	Pundamilia_nyererei
ENSMLEG00000043010	CPSF1	99	79.701	ENSPNAG00000024395	cpsf1	100	75.276	Pygocentrus_nattereri
ENSMLEG00000043010	CPSF1	99	97.910	ENSRNOG00000030705	Cpsf1	100	96.463	Rattus_norvegicus
ENSMLEG00000043010	CPSF1	100	99.723	ENSRBIG00000044907	CPSF1	100	99.723	Rhinopithecus_bieti
ENSMLEG00000043010	CPSF1	100	99.653	ENSRROG00000044861	CPSF1	100	99.653	Rhinopithecus_roxellana
ENSMLEG00000043010	CPSF1	97	98.780	ENSSBOG00000027177	CPSF1	100	98.780	Saimiri_boliviensis_boliviensis
ENSMLEG00000043010	CPSF1	100	92.690	ENSSHAG00000006500	CPSF1	100	92.690	Sarcophilus_harrisii
ENSMLEG00000043010	CPSF1	100	81.944	ENSSFOG00015004606	cpsf1	100	81.164	Scleropages_formosus
ENSMLEG00000043010	CPSF1	100	80.556	ENSSMAG00000020547	cpsf1	100	77.808	Scophthalmus_maximus
ENSMLEG00000043010	CPSF1	100	80.093	ENSSDUG00000001100	cpsf1	100	79.129	Seriola_dumerili
ENSMLEG00000043010	CPSF1	100	80.093	ENSSLDG00000003619	cpsf1	100	79.184	Seriola_lalandi_dorsalis
ENSMLEG00000043010	CPSF1	90	100.000	ENSSARG00000003643	CPSF1	92	100.000	Sorex_araneus
ENSMLEG00000043010	CPSF1	100	88.725	ENSSPUG00000014396	CPSF1	100	88.780	Sphenodon_punctatus
ENSMLEG00000043010	CPSF1	100	80.093	ENSSPAG00000005349	cpsf1	100	78.026	Stegastes_partitus
ENSMLEG00000043010	CPSF1	100	95.779	ENSSSCG00000005906	CPSF1	100	95.779	Sus_scrofa
ENSMLEG00000043010	CPSF1	100	76.852	ENSTRUG00000013134	cpsf1	99	77.622	Takifugu_rubripes
ENSMLEG00000043010	CPSF1	100	78.625	ENSTNIG00000014027	cpsf1	100	78.419	Tetraodon_nigroviridis
ENSMLEG00000043010	CPSF1	80	88.966	ENSTBEG00000001756	CPSF1	91	88.966	Tupaia_belangeri
ENSMLEG00000043010	CPSF1	100	88.426	ENSTTRG00000001937	CPSF1	90	96.546	Tursiops_truncatus
ENSMLEG00000043010	CPSF1	97	96.497	ENSUAMG00000006476	CPSF1	98	96.497	Ursus_americanus
ENSMLEG00000043010	CPSF1	67	54.967	ENSVPAG00000000157	-	50	93.991	Vicugna_pacos
ENSMLEG00000043010	CPSF1	100	93.627	ENSVVUG00000005940	-	100	93.627	Vulpes_vulpes
ENSMLEG00000043010	CPSF1	100	77.455	ENSXCOG00000003608	cpsf1	100	77.248	Xiphophorus_couchianus
ENSMLEG00000043010	CPSF1	100	76.934	ENSXMAG00000005798	cpsf1	100	76.865	Xiphophorus_maculatus