EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLEG00000043121 (Gene tree)
Gene ID: 105531168
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 15352 bases
Position: chrKN979240.1:3375621-3390972
Accession: 105531168
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000038153	MBD	PF01429.19	3.4e-16	1	1
ENSMLEP00000038150	MBD	PF01429.19	3.8e-16	1	1
ENSMLEP00000038167	MBD	PF01429.19	3.9e-16	1	1
ENSMLEP00000038168	MBD	PF01429.19	3.9e-16	1	1
ENSMLEP00000038116	MBD	PF01429.19	4e-16	1	1
ENSMLEP00000038176	MBD	PF01429.19	4e-16	1	1
ENSMLEP00000038164	MBD	PF01429.19	4.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000061778	MBD1-206	3335	XM_011969025	ENSMLEP00000038168	556 (aa)	XP_011824415	A0A2K6ADT1
ENSMLET00000061725	MBD1-201	3095	XM_011969024	ENSMLEP00000038116	567 (aa)	XP_011824414	A0A2K6ADG1
ENSMLET00000061774	MBD1-204	3482	XM_011969016	ENSMLEP00000038164	605 (aa)	XP_011824406	A0A2K6ADM1
ENSMLET00000061777	MBD1-205	3477	XM_011969026	ENSMLEP00000038167	550 (aa)	XP_011824416	A0A2K6ADM7
ENSMLET00000061763	MBD1-203	5036	XM_011969023	ENSMLEP00000038153	574 (aa)	XP_011824413	A0A2K6ADR2
ENSMLET00000061760	MBD1-202	5204	XM_011969017	ENSMLEP00000038150	630 (aa)	XP_011824407	A0A2K6ADN6
ENSMLET00000061786	MBD1-207	1761	XM_011969028	ENSMLEP00000038176	586 (aa)	XP_011824418	A0A2K6ADM0

Gene Model

Click here to download ENSMLEG00000043121's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000043121's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000043121	MBD1	100	99.683	ENSG00000141644	MBD1	100	99.683	Homo_sapiens
ENSMLEG00000043121	MBD1	66	36.066	ENSAPOG00000012810	mbd1b	50	34.204	Acanthochromis_polyacanthus
ENSMLEG00000043121	MBD1	100	87.816	ENSAMEG00000000238	MBD1	96	87.184	Ailuropoda_melanoleuca
ENSMLEG00000043121	MBD1	69	34.466	ENSAOCG00000020272	mbd1b	52	32.947	Amphiprion_ocellaris
ENSMLEG00000043121	MBD1	69	34.466	ENSAPEG00000023230	mbd1b	52	31.787	Amphiprion_percula
ENSMLEG00000043121	MBD1	58	47.674	ENSATEG00000009608	mbd1b	51	31.616	Anabas_testudineus
ENSMLEG00000043121	MBD1	69	45.455	ENSACAG00000006091	-	100	45.521	Anolis_carolinensis
ENSMLEG00000043121	MBD1	100	96.508	ENSANAG00000036253	MBD1	100	96.508	Aotus_nancymaae
ENSMLEG00000043121	MBD1	100	86.529	ENSBTAG00000003801	MBD1	100	86.688	Bos_taurus
ENSMLEG00000043121	MBD1	100	96.416	ENSCJAG00000004959	MBD1	100	96.416	Callithrix_jacchus
ENSMLEG00000043121	MBD1	100	86.846	ENSCAFG00000018928	MBD1	96	87.639	Canis_familiaris
ENSMLEG00000043121	MBD1	99	86.035	ENSCAFG00020024272	MBD1	97	86.838	Canis_lupus_dingo
ENSMLEG00000043121	MBD1	100	86.529	ENSCHIG00000021134	MBD1	100	86.688	Capra_hircus
ENSMLEG00000043121	MBD1	100	91.111	ENSTSYG00000000509	MBD1	100	91.111	Carlito_syrichta
ENSMLEG00000043121	MBD1	99	69.258	ENSCAPG00000015782	MBD1	96	68.421	Cavia_aperea
ENSMLEG00000043121	MBD1	100	74.124	ENSCPOG00000001671	MBD1	100	73.957	Cavia_porcellus
ENSMLEG00000043121	MBD1	100	94.489	ENSCCAG00000034600	MBD1	100	94.251	Cebus_capucinus
ENSMLEG00000043121	MBD1	100	99.841	ENSCATG00000029959	MBD1	100	99.841	Cercocebus_atys
ENSMLEG00000043121	MBD1	100	85.556	ENSCLAG00000007457	MBD1	89	85.556	Chinchilla_lanigera
ENSMLEG00000043121	MBD1	100	99.835	ENSCSAG00000018070	MBD1	100	99.835	Chlorocebus_sabaeus
ENSMLEG00000043121	MBD1	100	99.524	ENSCANG00000033425	MBD1	100	99.524	Colobus_angolensis_palliatus
ENSMLEG00000043121	MBD1	100	75.041	ENSCGRG00001014843	Mbd1	100	75.041	Cricetulus_griseus_chok1gshd
ENSMLEG00000043121	MBD1	99	63.492	ENSCGRG00000014135	Mbd1	84	79.310	Cricetulus_griseus_crigri
ENSMLEG00000043121	MBD1	58	49.412	ENSCSEG00000009082	mbd1b	53	49.412	Cynoglossus_semilaevis
ENSMLEG00000043121	MBD1	54	56.923	ENSCVAG00000001167	mbd1b	52	32.251	Cyprinodon_variegatus
ENSMLEG00000043121	MBD1	100	82.409	ENSDNOG00000015998	MBD1	100	83.677	Dasypus_novemcinctus
ENSMLEG00000043121	MBD1	99	74.382	ENSDORG00000013917	Mbd1	97	78.963	Dipodomys_ordii
ENSMLEG00000043121	MBD1	100	86.709	ENSEASG00005003857	MBD1	100	88.291	Equus_asinus_asinus
ENSMLEG00000043121	MBD1	100	86.656	ENSECAG00000011497	MBD1	80	88.303	Equus_caballus
ENSMLEG00000043121	MBD1	77	50.725	ENSELUG00000004375	mbd1b	52	50.725	Esox_lucius
ENSMLEG00000043121	MBD1	100	88.449	ENSFCAG00000015730	MBD1	100	87.975	Felis_catus
ENSMLEG00000043121	MBD1	99	80.492	ENSFDAG00000011085	MBD1	96	80.480	Fukomys_damarensis
ENSMLEG00000043121	MBD1	75	31.207	ENSFHEG00000020120	mbd1b	51	31.905	Fundulus_heteroclitus
ENSMLEG00000043121	MBD1	54	52.308	ENSGAFG00000008975	mbd1b	53	34.361	Gambusia_affinis
ENSMLEG00000043121	MBD1	70	31.313	ENSGACG00000012106	-	50	60.656	Gasterosteus_aculeatus
ENSMLEG00000043121	MBD1	100	99.365	ENSGGOG00000016966	MBD1	100	99.365	Gorilla_gorilla
ENSMLEG00000043121	MBD1	100	85.950	ENSHGLG00000008740	MBD1	100	85.950	Heterocephalus_glaber_female
ENSMLEG00000043121	MBD1	100	80.488	ENSHGLG00100005198	MBD1	100	88.274	Heterocephalus_glaber_male
ENSMLEG00000043121	MBD1	70	35.577	ENSHCOG00000009952	mbd1b	53	33.094	Hippocampus_comes
ENSMLEG00000043121	MBD1	62	38.650	ENSIPUG00000015243	-	50	50.602	Ictalurus_punctatus
ENSMLEG00000043121	MBD1	100	83.415	ENSSTOG00000007780	MBD1	100	83.740	Ictidomys_tridecemlineatus
ENSMLEG00000043121	MBD1	98	75.709	ENSJJAG00000022859	Mbd1	96	75.709	Jaculus_jaculus
ENSMLEG00000043121	MBD1	87	36.673	ENSLACG00000002414	-	51	65.079	Latimeria_chalumnae
ENSMLEG00000043121	MBD1	99	76.119	ENSLAFG00000031328	MBD1	97	76.119	Loxodonta_africana
ENSMLEG00000043121	MBD1	100	99.683	ENSMFAG00000026335	MBD1	100	99.683	Macaca_fascicularis
ENSMLEG00000043121	MBD1	100	99.683	ENSMMUG00000009050	MBD1	100	99.683	Macaca_mulatta
ENSMLEG00000043121	MBD1	100	99.683	ENSMNEG00000038822	MBD1	100	99.683	Macaca_nemestrina
ENSMLEG00000043121	MBD1	53	55.385	ENSMAMG00000023341	-	51	59.155	Mastacembelus_armatus
ENSMLEG00000043121	MBD1	100	90.081	ENSMICG00000006414	MBD1	100	90.407	Microcebus_murinus
ENSMLEG00000043121	MBD1	51	73.498	ENSMOCG00000011976	-	100	73.498	Microtus_ochrogaster
ENSMLEG00000043121	MBD1	65	43.415	ENSMODG00000001286	-	58	44.186	Monodelphis_domestica
ENSMLEG00000043121	MBD1	52	48.485	ENSMALG00000007808	mbd1b	52	32.766	Monopterus_albus
ENSMLEG00000043121	MBD1	99	67.568	ENSMUSG00000024561	Mbd1	97	68.471	Mus_musculus
ENSMLEG00000043121	MBD1	100	68.362	MGP_PahariEiJ_G0019128	Mbd1	100	68.680	Mus_pahari
ENSMLEG00000043121	MBD1	98	68.882	MGP_SPRETEiJ_G0023304	Mbd1	99	69.643	Mus_spretus
ENSMLEG00000043121	MBD1	100	87.342	ENSMPUG00000008843	MBD1	96	86.867	Mustela_putorius_furo
ENSMLEG00000043121	MBD1	100	85.397	ENSMLUG00000008286	MBD1	96	85.397	Myotis_lucifugus
ENSMLEG00000043121	MBD1	98	73.391	ENSNGAG00000011412	Mbd1	96	73.391	Nannospalax_galili
ENSMLEG00000043121	MBD1	100	83.618	ENSNLEG00000032711	-	100	83.618	Nomascus_leucogenys
ENSMLEG00000043121	MBD1	100	99.008	ENSNLEG00000011661	-	100	99.008	Nomascus_leucogenys
ENSMLEG00000043121	MBD1	100	74.876	ENSOPRG00000007647	MBD1	100	74.876	Ochotona_princeps
ENSMLEG00000043121	MBD1	99	78.092	ENSODEG00000018451	MBD1	97	78.975	Octodon_degus
ENSMLEG00000043121	MBD1	65	36.905	ENSONIG00000020289	mbd1b	50	31.463	Oreochromis_niloticus
ENSMLEG00000043121	MBD1	92	46.704	ENSOANG00000014593	-	100	47.727	Ornithorhynchus_anatinus
ENSMLEG00000043121	MBD1	100	83.835	ENSOCUG00000006554	MBD1	100	84.311	Oryctolagus_cuniculus
ENSMLEG00000043121	MBD1	100	87.500	ENSOGAG00000003784	MBD1	96	87.500	Otolemur_garnettii
ENSMLEG00000043121	MBD1	100	86.234	ENSOARG00000004218	MBD1	95	86.392	Ovis_aries
ENSMLEG00000043121	MBD1	100	99.504	ENSPPAG00000038886	MBD1	100	99.504	Pan_paniscus
ENSMLEG00000043121	MBD1	100	88.633	ENSPPRG00000021387	MBD1	100	88.138	Panthera_pardus
ENSMLEG00000043121	MBD1	100	88.633	ENSPTIG00000021231	MBD1	100	88.138	Panthera_tigris_altaica
ENSMLEG00000043121	MBD1	100	99.524	ENSPTRG00000010021	MBD1	100	99.524	Pan_troglodytes
ENSMLEG00000043121	MBD1	100	100.000	ENSPANG00000010867	MBD1	100	100.000	Papio_anubis
ENSMLEG00000043121	MBD1	99	63.993	ENSPEMG00000022630	Mbd1	97	63.932	Peromyscus_maniculatus_bairdii
ENSMLEG00000043121	MBD1	96	47.947	ENSPCIG00000027937	-	84	45.234	Phascolarctos_cinereus
ENSMLEG00000043121	MBD1	55	53.846	ENSPFOG00000007511	mbd1b	53	33.668	Poecilia_formosa
ENSMLEG00000043121	MBD1	54	53.846	ENSPLAG00000021258	mbd1b	53	33.668	Poecilia_latipinna
ENSMLEG00000043121	MBD1	57	53.846	ENSPMEG00000024145	mbd1b	51	52.174	Poecilia_mexicana
ENSMLEG00000043121	MBD1	54	53.846	ENSPREG00000021805	mbd1b	53	33.668	Poecilia_reticulata
ENSMLEG00000043121	MBD1	100	99.504	ENSPPYG00000009158	MBD1	91	99.504	Pongo_abelii
ENSMLEG00000043121	MBD1	99	76.694	ENSPCAG00000001648	MBD1	93	86.260	Procavia_capensis
ENSMLEG00000043121	MBD1	100	92.739	ENSPCOG00000012450	MBD1	100	92.739	Propithecus_coquereli
ENSMLEG00000043121	MBD1	99	52.257	ENSRNOG00000024104	Mbd1	96	55.308	Rattus_norvegicus
ENSMLEG00000043121	MBD1	100	99.281	ENSRBIG00000041294	MBD1	100	99.281	Rhinopithecus_bieti
ENSMLEG00000043121	MBD1	100	99.365	ENSRROG00000032517	MBD1	100	99.365	Rhinopithecus_roxellana
ENSMLEG00000043121	MBD1	100	95.819	ENSSBOG00000027169	MBD1	100	95.819	Saimiri_boliviensis_boliviensis
ENSMLEG00000043121	MBD1	84	46.253	ENSSHAG00000003661	-	100	47.335	Sarcophilus_harrisii
ENSMLEG00000043121	MBD1	51	48.913	ENSSPAG00000021447	mbd1b	55	32.407	Stegastes_partitus
ENSMLEG00000043121	MBD1	100	86.446	ENSSSCG00000004516	MBD1	98	88.528	Sus_scrofa
ENSMLEG00000043121	MBD1	51	50.538	ENSTRUG00000013422	mbd1b	54	30.464	Takifugu_rubripes
ENSMLEG00000043121	MBD1	74	84.167	ENSTBEG00000012651	-	68	84.167	Tupaia_belangeri
ENSMLEG00000043121	MBD1	100	85.008	ENSTTRG00000015523	MBD1	100	84.514	Tursiops_truncatus
ENSMLEG00000043121	MBD1	100	83.168	ENSUAMG00000004752	MBD1	100	84.158	Ursus_americanus
ENSMLEG00000043121	MBD1	100	87.974	ENSUMAG00000002947	MBD1	100	87.315	Ursus_maritimus
ENSMLEG00000043121	MBD1	54	53.846	ENSXMAG00000005628	mbd1b	52	33.921	Xiphophorus_maculatus