EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000043189 (Gene tree)
Gene ID: 105532198
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 146453 bases
Position: chrKN979318.1:750101-896553
Accession: 105532198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000038326	R3H	PF01424.22	2.4e-11	1	1
ENSMLEP00000038325	R3H	PF01424.22	2.8e-11	1	1
ENSMLEP00000038321	R3H	PF01424.22	2.8e-11	1	1
ENSMLEP00000038329	R3H	PF01424.22	2.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000061932	R3HDM1-201	4790	XM_011970277	ENSMLEP00000038321	1100 (aa)	XP_011825667	A0A2K6AE21
ENSMLET00000061944	R3HDM1-205	1337	-	ENSMLEP00000038333	445 (aa)	-	A0A2K6AE84
ENSMLET00000061937	R3HDM1-203	3900	XM_011970280	ENSMLEP00000038326	971 (aa)	XP_011825670	A0A2K6AE26
ENSMLET00000061936	R3HDM1-202	4374	XM_011970279	ENSMLEP00000038325	1044 (aa)	XP_011825669	A0A2K6AE58
ENSMLET00000061940	R3HDM1-204	3303	-	ENSMLEP00000038329	1100 (aa)	-	A0A2K6AE40

Gene Model

Click here to download ENSMLEG00000043189's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000043189's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000043189	R3HDM1	67	52.062	ENSMLEG00000031579	ARPP21	91	51.675
ENSMLEG00000043189	R3HDM1	99	49.457	ENSMLEG00000028915	R3HDM2	95	57.421

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000043189	R3HDM1	100	99.182	ENSG00000048991	R3HDM1	100	99.182	Homo_sapiens
ENSMLEG00000043189	R3HDM1	88	63.467	ENSAPOG00000020850	r3hdm1	90	59.656	Acanthochromis_polyacanthus
ENSMLEG00000043189	R3HDM1	100	95.014	ENSAMEG00000014886	R3HDM1	100	95.195	Ailuropoda_melanoleuca
ENSMLEG00000043189	R3HDM1	87	58.088	ENSAOCG00000005192	r3hdm1	93	59.656	Amphiprion_ocellaris
ENSMLEG00000043189	R3HDM1	87	63.200	ENSAPEG00000016108	r3hdm1	95	63.200	Amphiprion_percula
ENSMLEG00000043189	R3HDM1	87	63.441	ENSATEG00000000232	r3hdm1	87	64.010	Anabas_testudineus
ENSMLEG00000043189	R3HDM1	100	79.042	ENSAPLG00000015231	R3HDM1	100	79.313	Anas_platyrhynchos
ENSMLEG00000043189	R3HDM1	100	76.465	ENSACAG00000001676	R3HDM1	100	76.903	Anolis_carolinensis
ENSMLEG00000043189	R3HDM1	100	98.456	ENSANAG00000035334	R3HDM1	100	98.456	Aotus_nancymaae
ENSMLEG00000043189	R3HDM1	87	62.133	ENSACLG00000027282	r3hdm1	94	62.133	Astatotilapia_calliptera
ENSMLEG00000043189	R3HDM1	89	78.571	ENSAMXG00000012861	R3HDM1	100	60.843	Astyanax_mexicanus
ENSMLEG00000043189	R3HDM1	60	40.058	ENSAMXG00000020587	arpp21	82	38.486	Astyanax_mexicanus
ENSMLEG00000043189	R3HDM1	88	74.684	ENSAMXG00000003536	r3hdm1	89	74.603	Astyanax_mexicanus
ENSMLEG00000043189	R3HDM1	100	91.436	ENSBTAG00000013302	R3HDM1	100	91.469	Bos_taurus
ENSMLEG00000043189	R3HDM1	100	98.000	ENSCJAG00000011718	R3HDM1	100	98.000	Callithrix_jacchus
ENSMLEG00000043189	R3HDM1	100	95.195	ENSCAFG00000005075	R3HDM1	100	95.376	Canis_familiaris
ENSMLEG00000043189	R3HDM1	100	95.739	ENSCAFG00020016119	R3HDM1	100	95.830	Canis_lupus_dingo
ENSMLEG00000043189	R3HDM1	100	93.835	ENSCHIG00000020851	R3HDM1	100	94.107	Capra_hircus
ENSMLEG00000043189	R3HDM1	100	89.455	ENSCPOG00000012784	R3HDM1	100	89.543	Cavia_porcellus
ENSMLEG00000043189	R3HDM1	100	97.909	ENSCCAG00000027199	R3HDM1	100	97.909	Cebus_capucinus
ENSMLEG00000043189	R3HDM1	100	99.727	ENSCATG00000023642	R3HDM1	100	99.727	Cercocebus_atys
ENSMLEG00000043189	R3HDM1	100	89.094	ENSCLAG00000007962	R3HDM1	94	95.425	Chinchilla_lanigera
ENSMLEG00000043189	R3HDM1	100	96.737	ENSCSAG00000016356	R3HDM1	100	96.737	Chlorocebus_sabaeus
ENSMLEG00000043189	R3HDM1	80	93.939	ENSCHOG00000013638	R3HDM1	81	94.118	Choloepus_hoffmanni
ENSMLEG00000043189	R3HDM1	91	91.144	ENSCPBG00000009645	R3HDM1	100	91.144	Chrysemys_picta_bellii
ENSMLEG00000043189	R3HDM1	100	99.183	ENSCANG00000034748	R3HDM1	100	99.183	Colobus_angolensis_palliatus
ENSMLEG00000043189	R3HDM1	99	88.614	ENSCGRG00001012357	R3hdm1	97	88.614	Cricetulus_griseus_chok1gshd
ENSMLEG00000043189	R3HDM1	99	91.182	ENSCGRG00000012080	R3hdm1	100	91.030	Cricetulus_griseus_crigri
ENSMLEG00000043189	R3HDM1	81	65.246	ENSCSEG00000008944	r3hdm1	93	54.253	Cynoglossus_semilaevis
ENSMLEG00000043189	R3HDM1	87	61.067	ENSCVAG00000007582	r3hdm1	91	61.067	Cyprinodon_variegatus
ENSMLEG00000043189	R3HDM1	64	35.952	ENSDARG00000061081	arpp21	95	34.650	Danio_rerio
ENSMLEG00000043189	R3HDM1	100	91.368	ENSDNOG00000000771	R3HDM1	100	90.811	Dasypus_novemcinctus
ENSMLEG00000043189	R3HDM1	100	83.137	ENSETEG00000013606	R3HDM1	100	83.681	Echinops_telfairi
ENSMLEG00000043189	R3HDM1	66	41.534	ENSEBUG00000014746	arpp21	97	43.701	Eptatretus_burgeri
ENSMLEG00000043189	R3HDM1	100	98.066	ENSEASG00005007392	R3HDM1	100	95.286	Equus_asinus_asinus
ENSMLEG00000043189	R3HDM1	99	98.066	ENSECAG00000019114	R3HDM1	100	95.558	Equus_caballus
ENSMLEG00000043189	R3HDM1	91	87.061	ENSEEUG00000012589	R3HDM1	91	87.061	Erinaceus_europaeus
ENSMLEG00000043189	R3HDM1	92	53.391	ENSELUG00000014413	r3hdm1	96	53.964	Esox_lucius
ENSMLEG00000043189	R3HDM1	83	77.670	ENSELUG00000004909	R3HDM1	99	55.751	Esox_lucius
ENSMLEG00000043189	R3HDM1	100	97.790	ENSFCAG00000027113	R3HDM1	100	94.832	Felis_catus
ENSMLEG00000043189	R3HDM1	75	73.108	ENSFALG00000013731	R3HDM1	93	66.158	Ficedula_albicollis
ENSMLEG00000043189	R3HDM1	100	88.752	ENSFDAG00000016478	R3HDM1	100	90.033	Fukomys_damarensis
ENSMLEG00000043189	R3HDM1	87	57.108	ENSFHEG00000018713	r3hdm1	100	47.683	Fundulus_heteroclitus
ENSMLEG00000043189	R3HDM1	61	64.565	ENSGMOG00000006042	-	74	65.217	Gadus_morhua
ENSMLEG00000043189	R3HDM1	88	85.948	ENSGALG00000012246	R3HDM1	99	85.902	Gallus_gallus
ENSMLEG00000043189	R3HDM1	87	61.333	ENSGAFG00000006203	r3hdm1	95	61.333	Gambusia_affinis
ENSMLEG00000043189	R3HDM1	86	68.269	ENSGACG00000014925	r3hdm1	92	68.269	Gasterosteus_aculeatus
ENSMLEG00000043189	R3HDM1	99	83.662	ENSGAGG00000007840	R3HDM1	100	78.281	Gopherus_agassizii
ENSMLEG00000043189	R3HDM1	100	99.000	ENSGGOG00000008156	R3HDM1	100	99.000	Gorilla_gorilla
ENSMLEG00000043189	R3HDM1	100	89.173	ENSHGLG00000015718	R3HDM1	100	89.701	Heterocephalus_glaber_female
ENSMLEG00000043189	R3HDM1	100	69.084	ENSHGLG00100015374	-	100	73.550	Heterocephalus_glaber_male
ENSMLEG00000043189	R3HDM1	100	88.908	ENSHGLG00100003184	-	94	95.425	Heterocephalus_glaber_male
ENSMLEG00000043189	R3HDM1	87	59.517	ENSHCOG00000013366	r3hdm1	91	60.322	Hippocampus_comes
ENSMLEG00000043189	R3HDM1	89	68.615	ENSIPUG00000013629	r3hdm1	100	51.165	Ictalurus_punctatus
ENSMLEG00000043189	R3HDM1	82	73.668	ENSIPUG00000001676	R3HDM1	98	58.632	Ictalurus_punctatus
ENSMLEG00000043189	R3HDM1	100	95.459	ENSSTOG00000007572	R3HDM1	99	96.863	Ictidomys_tridecemlineatus
ENSMLEG00000043189	R3HDM1	94	85.806	ENSLACG00000005334	R3HDM1	100	71.117	Latimeria_chalumnae
ENSMLEG00000043189	R3HDM1	100	69.007	ENSLOCG00000001641	r3hdm1	100	66.370	Lepisosteus_oculatus
ENSMLEG00000043189	R3HDM1	100	91.021	ENSLAFG00000009065	R3HDM1	100	91.197	Loxodonta_africana
ENSMLEG00000043189	R3HDM1	100	99.909	ENSMFAG00000030331	R3HDM1	100	100.000	Macaca_fascicularis
ENSMLEG00000043189	R3HDM1	100	99.808	ENSMMUG00000009844	R3HDM1	100	99.808	Macaca_mulatta
ENSMLEG00000043189	R3HDM1	100	99.727	ENSMNEG00000027793	R3HDM1	100	100.000	Macaca_nemestrina
ENSMLEG00000043189	R3HDM1	87	62.466	ENSMAMG00000004532	r3hdm1	93	59.004	Mastacembelus_armatus
ENSMLEG00000043189	R3HDM1	87	62.133	ENSMZEG00005003157	r3hdm1	95	57.108	Maylandia_zebra
ENSMLEG00000043189	R3HDM1	100	78.591	ENSMGAG00000012461	R3HDM1	100	78.771	Meleagris_gallopavo
ENSMLEG00000043189	R3HDM1	100	88.158	ENSMAUG00000010315	R3hdm1	100	91.362	Mesocricetus_auratus
ENSMLEG00000043189	R3HDM1	95	92.641	ENSMICG00000042655	-	100	92.641	Microcebus_murinus
ENSMLEG00000043189	R3HDM1	100	94.299	ENSMICG00000005900	-	100	94.299	Microcebus_murinus
ENSMLEG00000043189	R3HDM1	90	77.567	ENSMODG00000000923	R3HDM1	97	77.757	Monodelphis_domestica
ENSMLEG00000043189	R3HDM1	99	58.065	ENSMALG00000009000	r3hdm1	91	58.065	Monopterus_albus
ENSMLEG00000043189	R3HDM1	100	87.412	MGP_CAROLIEiJ_G0014543	R3hdm1	100	94.561	Mus_caroli
ENSMLEG00000043189	R3HDM1	100	87.412	ENSMUSG00000056211	R3hdm1	100	94.561	Mus_musculus
ENSMLEG00000043189	R3HDM1	100	87.324	MGP_PahariEiJ_G0027779	R3hdm1	100	94.561	Mus_pahari
ENSMLEG00000043189	R3HDM1	100	87.588	MGP_SPRETEiJ_G0015350	R3hdm1	100	94.561	Mus_spretus
ENSMLEG00000043189	R3HDM1	100	94.742	ENSMPUG00000002412	R3HDM1	100	94.923	Mustela_putorius_furo
ENSMLEG00000043189	R3HDM1	100	92.948	ENSMLUG00000013824	R3HDM1	100	92.948	Myotis_lucifugus
ENSMLEG00000043189	R3HDM1	100	99.091	ENSNLEG00000008622	R3HDM1	100	99.091	Nomascus_leucogenys
ENSMLEG00000043189	R3HDM1	89	72.737	ENSMEUG00000011784	R3HDM1	100	72.940	Notamacropus_eugenii
ENSMLEG00000043189	R3HDM1	100	88.468	ENSODEG00000008607	R3HDM1	100	90.365	Octodon_degus
ENSMLEG00000043189	R3HDM1	94	66.873	ENSONIG00000012017	r3hdm1	91	66.873	Oreochromis_niloticus
ENSMLEG00000043189	R3HDM1	100	81.605	ENSOANG00000007987	R3HDM1	100	81.876	Ornithorhynchus_anatinus
ENSMLEG00000043189	R3HDM1	89	93.293	ENSOCUG00000017366	R3HDM1	98	93.699	Oryctolagus_cuniculus
ENSMLEG00000043189	R3HDM1	87	60.638	ENSORLG00000004297	r3hdm1	90	60.638	Oryzias_latipes
ENSMLEG00000043189	R3HDM1	89	61.067	ENSORLG00015017355	r3hdm1	91	61.067	Oryzias_latipes_hsok
ENSMLEG00000043189	R3HDM1	100	93.472	ENSOGAG00000003136	R3HDM1	100	93.472	Otolemur_garnettii
ENSMLEG00000043189	R3HDM1	100	93.654	ENSOARG00000010788	R3HDM1	100	93.926	Ovis_aries
ENSMLEG00000043189	R3HDM1	100	99.002	ENSPPAG00000027858	R3HDM1	100	99.002	Pan_paniscus
ENSMLEG00000043189	R3HDM1	100	94.456	ENSPPRG00000002626	R3HDM1	100	94.560	Panthera_pardus
ENSMLEG00000043189	R3HDM1	100	94.456	ENSPTIG00000016581	R3HDM1	100	94.560	Panthera_tigris_altaica
ENSMLEG00000043189	R3HDM1	100	98.911	ENSPTRG00000012494	R3HDM1	100	98.911	Pan_troglodytes
ENSMLEG00000043189	R3HDM1	100	100.000	ENSPANG00000026448	R3HDM1	100	100.000	Papio_anubis
ENSMLEG00000043189	R3HDM1	88	76.433	ENSPKIG00000004328	r3hdm1	91	76.677	Paramormyrops_kingsleyae
ENSMLEG00000043189	R3HDM1	100	78.662	ENSPSIG00000012915	R3HDM1	100	79.024	Pelodiscus_sinensis
ENSMLEG00000043189	R3HDM1	100	88.644	ENSPEMG00000015187	R3hdm1	100	91.030	Peromyscus_maniculatus_bairdii
ENSMLEG00000043189	R3HDM1	91	52.696	ENSPMAG00000003369	-	99	43.009	Petromyzon_marinus
ENSMLEG00000043189	R3HDM1	100	90.659	ENSPCIG00000002491	R3HDM1	100	84.144	Phascolarctos_cinereus
ENSMLEG00000043189	R3HDM1	87	55.474	ENSPFOG00000015036	r3hdm1	94	55.474	Poecilia_formosa
ENSMLEG00000043189	R3HDM1	87	59.947	ENSPLAG00000018042	r3hdm1	91	59.947	Poecilia_latipinna
ENSMLEG00000043189	R3HDM1	87	59.947	ENSPMEG00000023947	r3hdm1	91	59.947	Poecilia_mexicana
ENSMLEG00000043189	R3HDM1	81	68.608	ENSPREG00000007902	r3hdm1	94	60.000	Poecilia_reticulata
ENSMLEG00000043189	R3HDM1	100	97.872	ENSPPYG00000012815	R3HDM1	100	97.820	Pongo_abelii
ENSMLEG00000043189	R3HDM1	100	82.140	ENSPCAG00000006208	R3HDM1	100	81.505	Procavia_capensis
ENSMLEG00000043189	R3HDM1	100	94.137	ENSPCOG00000012698	R3HDM1	100	94.137	Propithecus_coquereli
ENSMLEG00000043189	R3HDM1	100	85.779	ENSPVAG00000006098	R3HDM1	100	85.779	Pteropus_vampyrus
ENSMLEG00000043189	R3HDM1	88	76.603	ENSPNAG00000005436	R3HDM1	99	76.527	Pygocentrus_nattereri
ENSMLEG00000043189	R3HDM1	94	74.522	ENSPNAG00000013952	r3hdm1	95	58.020	Pygocentrus_nattereri
ENSMLEG00000043189	R3HDM1	67	38.441	ENSPNAG00000004162	arpp21	85	39.567	Pygocentrus_nattereri
ENSMLEG00000043189	R3HDM1	100	87.060	ENSRNOG00000004099	R3hdm1	100	86.708	Rattus_norvegicus
ENSMLEG00000043189	R3HDM1	100	98.858	ENSRBIG00000033317	R3HDM1	100	99.631	Rhinopithecus_bieti
ENSMLEG00000043189	R3HDM1	100	99.448	ENSRROG00000034534	R3HDM1	100	99.280	Rhinopithecus_roxellana
ENSMLEG00000043189	R3HDM1	100	97.818	ENSSBOG00000020389	R3HDM1	100	97.818	Saimiri_boliviensis_boliviensis
ENSMLEG00000043189	R3HDM1	100	84.163	ENSSHAG00000016999	R3HDM1	100	84.344	Sarcophilus_harrisii
ENSMLEG00000043189	R3HDM1	100	56.661	ENSSFOG00015019851	-	100	56.394	Scleropages_formosus
ENSMLEG00000043189	R3HDM1	89	78.193	ENSSFOG00015014134	r3hdm1	100	70.631	Scleropages_formosus
ENSMLEG00000043189	R3HDM1	99	60.541	ENSSMAG00000001669	r3hdm1	99	44.521	Scophthalmus_maximus
ENSMLEG00000043189	R3HDM1	87	62.766	ENSSDUG00000010749	r3hdm1	91	62.766	Seriola_dumerili
ENSMLEG00000043189	R3HDM1	92	69.231	ENSSLDG00000004499	r3hdm1	91	57.457	Seriola_lalandi_dorsalis
ENSMLEG00000043189	R3HDM1	74	79.348	ENSSARG00000000352	-	69	82.724	Sorex_araneus
ENSMLEG00000043189	R3HDM1	100	80.217	ENSSPUG00000004167	R3HDM1	100	80.307	Sphenodon_punctatus
ENSMLEG00000043189	R3HDM1	87	63.467	ENSSPAG00000004648	r3hdm1	91	63.467	Stegastes_partitus
ENSMLEG00000043189	R3HDM1	100	97.238	ENSSSCG00000015692	R3HDM1	100	95.104	Sus_scrofa
ENSMLEG00000043189	R3HDM1	100	73.803	ENSTGUG00000011750	R3HDM1	100	73.532	Taeniopygia_guttata
ENSMLEG00000043189	R3HDM1	81	67.532	ENSTRUG00000011654	r3hdm1	91	57.841	Takifugu_rubripes
ENSMLEG00000043189	R3HDM1	87	46.069	ENSTNIG00000010362	r3hdm1	99	45.473	Tetraodon_nigroviridis
ENSMLEG00000043189	R3HDM1	100	87.750	ENSTTRG00000003935	R3HDM1	100	88.123	Tursiops_truncatus
ENSMLEG00000043189	R3HDM1	70	96.392	ENSUAMG00000024806	R3HDM1	93	96.392	Ursus_americanus
ENSMLEG00000043189	R3HDM1	100	94.148	ENSUMAG00000005552	R3HDM1	100	94.251	Ursus_maritimus
ENSMLEG00000043189	R3HDM1	97	94.485	ENSVPAG00000007333	R3HDM1	93	91.228	Vicugna_pacos
ENSMLEG00000043189	R3HDM1	100	97.790	ENSVVUG00000006457	R3HDM1	100	92.070	Vulpes_vulpes
ENSMLEG00000043189	R3HDM1	90	67.674	ENSXETG00000019330	r3hdm1	100	67.472	Xenopus_tropicalis
ENSMLEG00000043189	R3HDM1	71	50.064	ENSXCOG00000017448	r3hdm1	94	50.323	Xiphophorus_couchianus
ENSMLEG00000043189	R3HDM1	81	68.285	ENSXMAG00000007885	r3hdm1	88	61.867	Xiphophorus_maculatus