EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLEG00000043644 (Gene tree)
Gene ID: 105545354
Gene Symbol: SLIRP
Alias: C14orf156|DC50
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Minus strand
Length: 65820 bases
Position: chrKN975476.1:1512710-1578529
Accession: 105545354
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000039213	RRM_1	PF00076.22	7.2e-13	1	1
ENSMLEP00000039214	RRM_1	PF00076.22	1e-12	1	1
ENSMLEP00000039211	RRM_1	PF00076.22	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000062830	SLIRP-203	418	XM_011988265	ENSMLEP00000039214	107 (aa)	XP_011843655	A0A2K6AGL7
ENSMLET00000062827	SLIRP-201	339	-	ENSMLEP00000039211	112 (aa)	-	A0A2K6AGM5
ENSMLET00000062829	SLIRP-202	870	XM_011988268	ENSMLEP00000039213	98 (aa)	XP_011843658	A0A2K6AGQ0

Gene Model

Click here to download ENSMLEG00000043644's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000043644's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLEG00000043644	SLIRP	76	30.864	ENSMLEG00000041600	HNRNPDL	52	30.864
ENSMLEG00000043644	SLIRP	87	33.696	ENSMLEG00000033888	MSI2	55	35.135

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000043644	SLIRP	86	83.333	ENSG00000119705	SLIRP	100	85.870	Homo_sapiens
ENSMLEG00000043644	SLIRP	68	58.209	ENSAPOG00000001298	slirp	67	58.209	Acanthochromis_polyacanthus
ENSMLEG00000043644	SLIRP	90	80.682	ENSAMEG00000003975	SLIRP	98	79.775	Ailuropoda_melanoleuca
ENSMLEG00000043644	SLIRP	68	59.701	ENSACIG00000023083	slirp	67	58.824	Amphilophus_citrinellus
ENSMLEG00000043644	SLIRP	80	50.000	ENSAOCG00000006342	slirp	91	50.000	Amphiprion_ocellaris
ENSMLEG00000043644	SLIRP	80	50.000	ENSAPEG00000015917	slirp	91	50.000	Amphiprion_percula
ENSMLEG00000043644	SLIRP	79	50.000	ENSAPEG00000015719	-	90	50.000	Amphiprion_percula
ENSMLEG00000043644	SLIRP	68	59.701	ENSATEG00000013525	slirp	67	59.701	Anabas_testudineus
ENSMLEG00000043644	SLIRP	66	61.538	ENSAMXG00000018693	slirp	65	61.538	Astyanax_mexicanus
ENSMLEG00000043644	SLIRP	100	85.714	ENSCJAG00000016946	SLIRP	99	88.043	Callithrix_jacchus
ENSMLEG00000043644	SLIRP	90	77.273	ENSCAFG00020015876	-	85	73.404	Canis_lupus_dingo
ENSMLEG00000043644	SLIRP	97	80.000	ENSCCAG00000030130	SLIRP	100	75.806	Cebus_capucinus
ENSMLEG00000043644	SLIRP	100	100.000	ENSCATG00000036327	SLIRP	100	100.000	Cercocebus_atys
ENSMLEG00000043644	SLIRP	91	97.753	ENSCSAG00000011736	SLIRP	81	98.864	Chlorocebus_sabaeus
ENSMLEG00000043644	SLIRP	68	59.701	ENSCPBG00000026327	SLIRP	68	59.701	Chrysemys_picta_bellii
ENSMLEG00000043644	SLIRP	86	96.429	ENSCANG00000032892	SLIRP	100	94.898	Colobus_angolensis_palliatus
ENSMLEG00000043644	SLIRP	90	71.591	ENSCGRG00001024068	Slirp	79	71.591	Cricetulus_griseus_chok1gshd
ENSMLEG00000043644	SLIRP	90	71.591	ENSCGRG00000017440	Slirp	79	71.591	Cricetulus_griseus_crigri
ENSMLEG00000043644	SLIRP	95	46.078	ENSCSEG00000015766	slirp	94	46.078	Cynoglossus_semilaevis
ENSMLEG00000043644	SLIRP	68	65.672	ENSCVAG00000012504	slirp	67	64.706	Cyprinodon_variegatus
ENSMLEG00000043644	SLIRP	69	61.765	ENSDARG00000097753	slirp	65	62.687	Danio_rerio
ENSMLEG00000043644	SLIRP	69	69.118	ENSDNOG00000007721	SLIRP	80	63.636	Dasypus_novemcinctus
ENSMLEG00000043644	SLIRP	90	71.591	ENSDORG00000012379	Slirp	79	71.591	Dipodomys_ordii
ENSMLEG00000043644	SLIRP	79	67.532	ENSETEG00000010345	SLIRP	94	63.107	Echinops_telfairi
ENSMLEG00000043644	SLIRP	90	81.818	ENSEASG00005020193	SLIRP	79	81.818	Equus_asinus_asinus
ENSMLEG00000043644	SLIRP	72	67.606	ENSEEUG00000007257	SLIRP	70	67.606	Erinaceus_europaeus
ENSMLEG00000043644	SLIRP	66	60.000	ENSELUG00000016800	slirp	64	60.000	Esox_lucius
ENSMLEG00000043644	SLIRP	99	77.320	ENSFCAG00000036326	SLIRP	98	77.320	Felis_catus
ENSMLEG00000043644	SLIRP	68	56.716	ENSFALG00000012583	SLIRP	92	47.475	Ficedula_albicollis
ENSMLEG00000043644	SLIRP	91	67.021	ENSFDAG00000008347	SLIRP	83	67.021	Fukomys_damarensis
ENSMLEG00000043644	SLIRP	59	62.069	ENSFHEG00000004709	slirp	63	62.069	Fundulus_heteroclitus
ENSMLEG00000043644	SLIRP	79	54.545	ENSGMOG00000016948	slirp	73	54.545	Gadus_morhua
ENSMLEG00000043644	SLIRP	79	52.809	ENSGALG00000031238	SLIRP	89	55.056	Gallus_gallus
ENSMLEG00000043644	SLIRP	71	65.714	ENSGAFG00000010998	slirp	74	62.162	Gambusia_affinis
ENSMLEG00000043644	SLIRP	68	59.701	ENSGACG00000020137	slirp	79	58.824	Gasterosteus_aculeatus
ENSMLEG00000043644	SLIRP	79	59.740	ENSGAGG00000009953	SLIRP	53	59.740	Gopherus_agassizii
ENSMLEG00000043644	SLIRP	86	83.333	ENSGGOG00000011059	-	100	86.022	Gorilla_gorilla
ENSMLEG00000043644	SLIRP	90	64.773	ENSHGLG00000018491	SLIRP	79	64.773	Heterocephalus_glaber_female
ENSMLEG00000043644	SLIRP	90	64.773	ENSHGLG00100014153	SLIRP	79	64.773	Heterocephalus_glaber_male
ENSMLEG00000043644	SLIRP	68	64.179	ENSHCOG00000006795	slirp	69	63.235	Hippocampus_comes
ENSMLEG00000043644	SLIRP	66	61.538	ENSIPUG00000010214	SLIRP	65	61.538	Ictalurus_punctatus
ENSMLEG00000043644	SLIRP	80	74.359	ENSSTOG00000034316	SLIRP	82	74.725	Ictidomys_tridecemlineatus
ENSMLEG00000043644	SLIRP	78	51.316	ENSKMAG00000002038	slirp	72	51.316	Kryptolebias_marmoratus
ENSMLEG00000043644	SLIRP	68	59.701	ENSLBEG00000007564	slirp	67	59.701	Labrus_bergylta
ENSMLEG00000043644	SLIRP	70	59.420	ENSLACG00000013434	SLIRP	71	56.757	Latimeria_chalumnae
ENSMLEG00000043644	SLIRP	100	97.959	ENSMFAG00000042960	SLIRP	100	97.959	Macaca_fascicularis
ENSMLEG00000043644	SLIRP	100	98.980	ENSMMUG00000029256	SLIRP	100	98.980	Macaca_mulatta
ENSMLEG00000043644	SLIRP	100	97.959	ENSMNEG00000028921	SLIRP	100	97.959	Macaca_nemestrina
ENSMLEG00000043644	SLIRP	68	61.194	ENSMZEG00005004617	slirp	68	61.194	Maylandia_zebra
ENSMLEG00000043644	SLIRP	90	71.591	ENSMAUG00000003857	Slirp	82	69.231	Mesocricetus_auratus
ENSMLEG00000043644	SLIRP	100	69.231	ENSMICG00000012080	SLIRP	100	69.231	Microcebus_murinus
ENSMLEG00000043644	SLIRP	90	73.864	ENSMOCG00000016019	Slirp	87	73.864	Microtus_ochrogaster
ENSMLEG00000043644	SLIRP	68	56.716	ENSMMOG00000018268	slirp	67	56.716	Mola_mola
ENSMLEG00000043644	SLIRP	70	59.420	ENSMODG00000005207	-	97	59.420	Monodelphis_domestica
ENSMLEG00000043644	SLIRP	82	53.750	ENSMALG00000012581	slirp	79	53.750	Monopterus_albus
ENSMLEG00000043644	SLIRP	90	76.136	MGP_CAROLIEiJ_G0017995	Slirp	81	76.136	Mus_caroli
ENSMLEG00000043644	SLIRP	90	77.273	ENSMUSG00000021040	Slirp	89	77.273	Mus_musculus
ENSMLEG00000043644	SLIRP	90	77.273	MGP_SPRETEiJ_G0018840	Slirp	79	77.273	Mus_spretus
ENSMLEG00000043644	SLIRP	72	74.648	ENSMLUG00000024998	-	79	71.591	Myotis_lucifugus
ENSMLEG00000043644	SLIRP	79	71.429	ENSMLUG00000029544	-	79	70.455	Myotis_lucifugus
ENSMLEG00000043644	SLIRP	90	68.182	ENSNGAG00000016363	Slirp	98	57.547	Nannospalax_galili
ENSMLEG00000043644	SLIRP	100	82.653	ENSNLEG00000032459	-	99	84.783	Nomascus_leucogenys
ENSMLEG00000043644	SLIRP	86	77.381	ENSNLEG00000027238	-	95	78.571	Nomascus_leucogenys
ENSMLEG00000043644	SLIRP	91	80.899	ENSODEG00000012580	SLIRP	97	80.899	Octodon_degus
ENSMLEG00000043644	SLIRP	68	61.194	ENSONIG00000011692	slirp	88	52.874	Oreochromis_niloticus
ENSMLEG00000043644	SLIRP	87	63.529	ENSOANG00000022366	SLIRP	87	57.843	Ornithorhynchus_anatinus
ENSMLEG00000043644	SLIRP	76	51.724	ENSORLG00000010761	slirp	67	51.724	Oryzias_latipes
ENSMLEG00000043644	SLIRP	76	52.874	ENSORLG00020022188	slirp	87	52.874	Oryzias_latipes_hni
ENSMLEG00000043644	SLIRP	95	46.296	ENSORLG00015020171	slirp	98	46.296	Oryzias_latipes_hsok
ENSMLEG00000043644	SLIRP	68	59.701	ENSOMEG00000019321	slirp	67	59.701	Oryzias_melastigma
ENSMLEG00000043644	SLIRP	86	82.143	ENSPPAG00000040710	-	100	86.022	Pan_paniscus
ENSMLEG00000043644	SLIRP	99	78.351	ENSPPRG00000014350	SLIRP	98	78.351	Panthera_pardus
ENSMLEG00000043644	SLIRP	99	78.351	ENSPTIG00000014196	SLIRP	98	78.351	Panthera_tigris_altaica
ENSMLEG00000043644	SLIRP	86	82.143	ENSPTRG00000030691	SLIRP	100	86.022	Pan_troglodytes
ENSMLEG00000043644	SLIRP	100	98.980	ENSPANG00000026323	SLIRP	100	98.980	Papio_anubis
ENSMLEG00000043644	SLIRP	58	59.649	ENSPKIG00000008831	slirp	56	59.649	Paramormyrops_kingsleyae
ENSMLEG00000043644	SLIRP	68	67.164	ENSPMGG00000010541	slirp	78	66.176	Periophthalmus_magnuspinnatus
ENSMLEG00000043644	SLIRP	79	72.727	ENSPEMG00000013234	Slirp	86	69.318	Peromyscus_maniculatus_bairdii
ENSMLEG00000043644	SLIRP	61	53.333	ENSPMAG00000009355	slirp	67	53.333	Petromyzon_marinus
ENSMLEG00000043644	SLIRP	81	56.790	ENSPCIG00000026842	-	87	56.790	Phascolarctos_cinereus
ENSMLEG00000043644	SLIRP	68	64.179	ENSPFOG00000006758	slirp	74	60.811	Poecilia_formosa
ENSMLEG00000043644	SLIRP	68	64.179	ENSPLAG00000011140	slirp	74	60.811	Poecilia_latipinna
ENSMLEG00000043644	SLIRP	68	64.179	ENSPMEG00000019535	slirp	74	60.811	Poecilia_mexicana
ENSMLEG00000043644	SLIRP	70	62.319	ENSPREG00000011673	slirp	74	60.811	Poecilia_reticulata
ENSMLEG00000043644	SLIRP	79	80.519	ENSPPYG00000006030	SLIRP	81	80.682	Pongo_abelii
ENSMLEG00000043644	SLIRP	100	68.103	ENSPCOG00000015159	SLIRP	100	68.103	Propithecus_coquereli
ENSMLEG00000043644	SLIRP	68	67.164	ENSPNAG00000008633	slirp	69	66.176	Pygocentrus_nattereri
ENSMLEG00000043644	SLIRP	77	96.000	ENSRBIG00000031396	-	86	95.349	Rhinopithecus_bieti
ENSMLEG00000043644	SLIRP	87	85.556	ENSRBIG00000032998	-	91	89.796	Rhinopithecus_bieti
ENSMLEG00000043644	SLIRP	79	88.312	ENSRBIG00000035817	-	83	87.640	Rhinopithecus_bieti
ENSMLEG00000043644	SLIRP	100	96.939	ENSRBIG00000032222	-	100	96.939	Rhinopithecus_bieti
ENSMLEG00000043644	SLIRP	80	93.590	ENSRROG00000041312	-	87	94.318	Rhinopithecus_roxellana
ENSMLEG00000043644	SLIRP	83	91.667	ENSRROG00000017133	-	100	91.667	Rhinopithecus_roxellana
ENSMLEG00000043644	SLIRP	89	96.552	ENSRROG00000036656	-	100	95.918	Rhinopithecus_roxellana
ENSMLEG00000043644	SLIRP	77	94.667	ENSRROG00000035604	-	86	94.186	Rhinopithecus_roxellana
ENSMLEG00000043644	SLIRP	100	79.592	ENSSBOG00000020014	SLIRP	99	82.609	Saimiri_boliviensis_boliviensis
ENSMLEG00000043644	SLIRP	68	59.701	ENSSFOG00015011165	slirp	76	54.667	Scleropages_formosus
ENSMLEG00000043644	SLIRP	78	40.698	ENSSMAG00000012930	slirp	84	40.698	Scophthalmus_maximus
ENSMLEG00000043644	SLIRP	68	62.687	ENSSLDG00000023136	slirp	62	61.765	Seriola_lalandi_dorsalis
ENSMLEG00000043644	SLIRP	82	58.025	ENSSPUG00000009346	SLIRP	83	58.025	Sphenodon_punctatus
ENSMLEG00000043644	SLIRP	79	47.191	ENSSPAG00000013477	slirp	89	47.191	Stegastes_partitus
ENSMLEG00000043644	SLIRP	90	75.000	ENSSSCG00000028167	SLIRP	90	70.588	Sus_scrofa
ENSMLEG00000043644	SLIRP	71	55.263	ENSTGUG00000012337	SLIRP	80	53.409	Taeniopygia_guttata
ENSMLEG00000043644	SLIRP	90	46.067	ENSTRUG00000020127	slirp	67	54.412	Takifugu_rubripes
ENSMLEG00000043644	SLIRP	90	79.545	ENSUAMG00000022445	SLIRP	79	79.545	Ursus_americanus
ENSMLEG00000043644	SLIRP	90	79.545	ENSUMAG00000007166	SLIRP	79	79.545	Ursus_maritimus
ENSMLEG00000043644	SLIRP	90	76.136	ENSVPAG00000001781	SLIRP	81	76.136	Vicugna_pacos
ENSMLEG00000043644	SLIRP	85	74.699	ENSVVUG00000004436	SLIRP	79	80.682	Vulpes_vulpes
ENSMLEG00000043644	SLIRP	68	62.687	ENSXETG00000030343	SLIRP	75	62.687	Xenopus_tropicalis
ENSMLEG00000043644	SLIRP	70	63.768	ENSXCOG00000009422	slirp	73	60.274	Xiphophorus_couchianus
ENSMLEG00000043644	SLIRP	70	65.217	ENSXMAG00000015655	slirp	74	60.811	Xiphophorus_maculatus