EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLEG00000044182 (Gene tree)
Gene ID: 105546246
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Mandrillus_leucophaeus
Status: putative
Strand: Plus strand
Length: 94440 bases
Position: chrKN975737.1:1319845-1414284
Accession: 105546246
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLEP00000040337	SpoU_methylase	PF00588.19	5.7e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLET00000063962	TARBP1-201	4068	XM_011989377	ENSMLEP00000040337	1355 (aa)	XP_011844767	A0A2K6AJU8

Gene Model

Click here to download ENSMLEG00000044182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLEG00000044182's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLEG00000044182	TARBP1	100	97.122	ENSG00000059588	TARBP1	84	97.122	Homo_sapiens
ENSMLEG00000044182	TARBP1	99	45.546	ENSAPOG00000016419	si:dkey-85a20.4	83	45.546	Acanthochromis_polyacanthus
ENSMLEG00000044182	TARBP1	99	85.324	ENSAMEG00000003359	TARBP1	99	85.324	Ailuropoda_melanoleuca
ENSMLEG00000044182	TARBP1	99	45.954	ENSATEG00000020266	si:dkey-85a20.4	83	45.915	Anabas_testudineus
ENSMLEG00000044182	TARBP1	100	67.641	ENSAPLG00000007666	TARBP1	99	68.521	Anas_platyrhynchos
ENSMLEG00000044182	TARBP1	99	62.712	ENSACAG00000001142	TARBP1	84	62.712	Anolis_carolinensis
ENSMLEG00000044182	TARBP1	100	92.546	ENSANAG00000022031	TARBP1	86	92.546	Aotus_nancymaae
ENSMLEG00000044182	TARBP1	99	86.064	ENSBTAG00000004517	TARBP1	83	86.064	Bos_taurus
ENSMLEG00000044182	TARBP1	100	94.686	ENSCJAG00000018155	TARBP1	84	94.686	Callithrix_jacchus
ENSMLEG00000044182	TARBP1	99	86.431	ENSCAFG00000011533	TARBP1	96	86.431	Canis_familiaris
ENSMLEG00000044182	TARBP1	99	86.377	ENSCAFG00020027141	TARBP1	84	86.377	Canis_lupus_dingo
ENSMLEG00000044182	TARBP1	99	85.048	ENSCHIG00000011437	TARBP1	83	85.048	Capra_hircus
ENSMLEG00000044182	TARBP1	97	88.168	ENSTSYG00000010382	TARBP1	97	88.168	Carlito_syrichta
ENSMLEG00000044182	TARBP1	94	68.984	ENSCAPG00000010831	TARBP1	99	68.984	Cavia_aperea
ENSMLEG00000044182	TARBP1	99	78.492	ENSCPOG00000013995	TARBP1	85	78.566	Cavia_porcellus
ENSMLEG00000044182	TARBP1	100	95.277	ENSCCAG00000037278	TARBP1	84	95.277	Cebus_capucinus
ENSMLEG00000044182	TARBP1	100	99.262	ENSCATG00000011754	TARBP1	84	99.262	Cercocebus_atys
ENSMLEG00000044182	TARBP1	97	78.670	ENSCLAG00000003655	TARBP1	96	78.746	Chinchilla_lanigera
ENSMLEG00000044182	TARBP1	95	98.911	ENSCSAG00000010100	TARBP1	100	98.911	Chlorocebus_sabaeus
ENSMLEG00000044182	TARBP1	89	77.258	ENSCPBG00000005587	TARBP1	83	77.258	Chrysemys_picta_bellii
ENSMLEG00000044182	TARBP1	100	98.672	ENSCANG00000034343	TARBP1	99	98.672	Colobus_angolensis_palliatus
ENSMLEG00000044182	TARBP1	99	78.164	ENSCGRG00001016690	Tarbp1	85	78.164	Cricetulus_griseus_chok1gshd
ENSMLEG00000044182	TARBP1	99	78.164	ENSCGRG00000016893	Tarbp1	92	78.164	Cricetulus_griseus_crigri
ENSMLEG00000044182	TARBP1	99	42.910	ENSCSEG00000005255	si:dkey-85a20.4	83	45.411	Cynoglossus_semilaevis
ENSMLEG00000044182	TARBP1	99	46.300	ENSDARG00000079055	si:dkey-85a20.4	99	54.844	Danio_rerio
ENSMLEG00000044182	TARBP1	99	87.004	ENSDNOG00000008637	TARBP1	82	87.004	Dasypus_novemcinctus
ENSMLEG00000044182	TARBP1	96	74.151	ENSDORG00000007984	Tarbp1	100	74.151	Dipodomys_ordii
ENSMLEG00000044182	TARBP1	99	88.513	ENSEASG00005000252	TARBP1	84	88.513	Equus_asinus_asinus
ENSMLEG00000044182	TARBP1	99	88.218	ENSECAG00000023673	TARBP1	84	88.292	Equus_caballus
ENSMLEG00000044182	TARBP1	99	45.098	ENSELUG00000012193	si:dkey-85a20.4	84	45.098	Esox_lucius
ENSMLEG00000044182	TARBP1	99	83.186	ENSFCAG00000014183	TARBP1	83	83.186	Felis_catus
ENSMLEG00000044182	TARBP1	96	67.997	ENSFALG00000013565	TARBP1	99	67.942	Ficedula_albicollis
ENSMLEG00000044182	TARBP1	95	75.859	ENSFDAG00000001308	TARBP1	99	75.936	Fukomys_damarensis
ENSMLEG00000044182	TARBP1	91	53.803	ENSFHEG00000007565	si:dkey-85a20.4	80	53.803	Fundulus_heteroclitus
ENSMLEG00000044182	TARBP1	99	42.671	ENSGMOG00000004549	si:dkey-85a20.4	98	42.744	Gadus_morhua
ENSMLEG00000044182	TARBP1	99	63.409	ENSGALG00000011000	TARBP1	85	63.409	Gallus_gallus
ENSMLEG00000044182	TARBP1	99	45.055	ENSGAFG00000007387	si:dkey-85a20.4	83	44.982	Gambusia_affinis
ENSMLEG00000044182	TARBP1	100	45.336	ENSGACG00000005865	si:dkey-85a20.4	97	45.336	Gasterosteus_aculeatus
ENSMLEG00000044182	TARBP1	99	72.868	ENSGAGG00000012102	TARBP1	87	72.868	Gopherus_agassizii
ENSMLEG00000044182	TARBP1	100	93.594	ENSGGOG00000022879	TARBP1	99	93.594	Gorilla_gorilla
ENSMLEG00000044182	TARBP1	99	46.560	ENSHBUG00000008877	si:dkey-85a20.4	83	46.560	Haplochromis_burtoni
ENSMLEG00000044182	TARBP1	99	79.675	ENSHGLG00000011592	TARBP1	85	79.749	Heterocephalus_glaber_female
ENSMLEG00000044182	TARBP1	99	79.188	ENSHGLG00100015169	TARBP1	93	79.188	Heterocephalus_glaber_male
ENSMLEG00000044182	TARBP1	98	44.297	ENSIPUG00000005249	si:dkey-85a20.4	81	44.297	Ictalurus_punctatus
ENSMLEG00000044182	TARBP1	99	75.852	ENSSTOG00000032291	TARBP1	97	75.852	Ictidomys_tridecemlineatus
ENSMLEG00000044182	TARBP1	99	73.727	ENSJJAG00000017840	Tarbp1	93	73.727	Jaculus_jaculus
ENSMLEG00000044182	TARBP1	75	47.995	ENSKMAG00000017546	si:dkey-85a20.4	72	48.396	Kryptolebias_marmoratus
ENSMLEG00000044182	TARBP1	77	50.732	ENSLBEG00000012132	si:dkey-85a20.4	74	50.732	Labrus_bergylta
ENSMLEG00000044182	TARBP1	99	55.947	ENSLACG00000004337	TARBP1	83	56.071	Latimeria_chalumnae
ENSMLEG00000044182	TARBP1	99	51.028	ENSLOCG00000016214	si:dkey-85a20.4	83	51.028	Lepisosteus_oculatus
ENSMLEG00000044182	TARBP1	99	86.401	ENSLAFG00000011394	TARBP1	86	86.401	Loxodonta_africana
ENSMLEG00000044182	TARBP1	100	96.094	ENSMFAG00000041068	TARBP1	84	96.094	Macaca_fascicularis
ENSMLEG00000044182	TARBP1	100	96.021	ENSMMUG00000021703	TARBP1	83	96.021	Macaca_mulatta
ENSMLEG00000044182	TARBP1	100	99.336	ENSMNEG00000045002	TARBP1	84	99.336	Macaca_nemestrina
ENSMLEG00000044182	TARBP1	99	46.272	ENSMAMG00000021760	si:dkey-85a20.4	84	46.272	Mastacembelus_armatus
ENSMLEG00000044182	TARBP1	99	46.488	ENSMZEG00005005751	si:dkey-85a20.4	83	46.488	Maylandia_zebra
ENSMLEG00000044182	TARBP1	100	77.303	ENSMAUG00000020968	Tarbp1	86	77.303	Mesocricetus_auratus
ENSMLEG00000044182	TARBP1	99	80.281	ENSMICG00000015280	TARBP1	82	80.281	Microcebus_murinus
ENSMLEG00000044182	TARBP1	99	76.593	ENSMOCG00000004128	Tarbp1	85	76.593	Microtus_ochrogaster
ENSMLEG00000044182	TARBP1	99	44.371	ENSMMOG00000007795	si:dkey-85a20.4	83	44.518	Mola_mola
ENSMLEG00000044182	TARBP1	99	76.640	ENSMODG00000008504	TARBP1	82	76.640	Monodelphis_domestica
ENSMLEG00000044182	TARBP1	99	45.387	ENSMALG00000002916	si:dkey-85a20.4	83	45.622	Monopterus_albus
ENSMLEG00000044182	TARBP1	100	76.032	MGP_CAROLIEiJ_G0031729	Tarbp1	86	76.032	Mus_caroli
ENSMLEG00000044182	TARBP1	100	75.737	ENSMUSG00000090290	Tarbp1	86	75.737	Mus_musculus
ENSMLEG00000044182	TARBP1	99	76.314	MGP_PahariEiJ_G0023326	Tarbp1	85	76.314	Mus_pahari
ENSMLEG00000044182	TARBP1	99	76.219	MGP_SPRETEiJ_G0032846	Tarbp1	86	76.219	Mus_spretus
ENSMLEG00000044182	TARBP1	92	83.614	ENSMPUG00000002802	TARBP1	99	83.614	Mustela_putorius_furo
ENSMLEG00000044182	TARBP1	99	74.688	ENSMLUG00000002414	TARBP1	99	74.688	Myotis_lucifugus
ENSMLEG00000044182	TARBP1	100	97.491	ENSNLEG00000002518	TARBP1	84	97.491	Nomascus_leucogenys
ENSMLEG00000044182	TARBP1	63	78.178	ENSMEUG00000011370	-	53	78.178	Notamacropus_eugenii
ENSMLEG00000044182	TARBP1	80	86.567	ENSOPRG00000013822	TARBP1	67	86.567	Ochotona_princeps
ENSMLEG00000044182	TARBP1	99	78.550	ENSODEG00000005238	TARBP1	88	78.624	Octodon_degus
ENSMLEG00000044182	TARBP1	99	46.638	ENSONIG00000009789	si:dkey-85a20.4	97	46.638	Oreochromis_niloticus
ENSMLEG00000044182	TARBP1	100	85.619	ENSOCUG00000017418	TARBP1	83	85.619	Oryctolagus_cuniculus
ENSMLEG00000044182	TARBP1	99	43.469	ENSORLG00000010529	si:dkey-85a20.4	83	43.415	Oryzias_latipes
ENSMLEG00000044182	TARBP1	99	43.179	ENSORLG00020019264	si:dkey-85a20.4	83	43.126	Oryzias_latipes_hni
ENSMLEG00000044182	TARBP1	99	43.437	ENSORLG00015003276	si:dkey-85a20.4	83	43.384	Oryzias_latipes_hsok
ENSMLEG00000044182	TARBP1	99	84.945	ENSOGAG00000002379	TARBP1	84	84.945	Otolemur_garnettii
ENSMLEG00000044182	TARBP1	99	84.576	ENSOARG00000003434	TARBP1	90	84.576	Ovis_aries
ENSMLEG00000044182	TARBP1	100	97.269	ENSPPAG00000028097	TARBP1	99	97.269	Pan_paniscus
ENSMLEG00000044182	TARBP1	99	82.388	ENSPPRG00000013561	TARBP1	87	82.301	Panthera_pardus
ENSMLEG00000044182	TARBP1	99	85.789	ENSPTIG00000009281	TARBP1	99	85.789	Panthera_tigris_altaica
ENSMLEG00000044182	TARBP1	100	97.048	ENSPTRG00000002124	TARBP1	83	97.048	Pan_troglodytes
ENSMLEG00000044182	TARBP1	100	99.410	ENSPANG00000021933	TARBP1	84	99.410	Papio_anubis
ENSMLEG00000044182	TARBP1	100	47.304	ENSPKIG00000016716	si:dkey-85a20.4	83	47.304	Paramormyrops_kingsleyae
ENSMLEG00000044182	TARBP1	95	70.698	ENSPSIG00000010699	TARBP1	100	70.698	Pelodiscus_sinensis
ENSMLEG00000044182	TARBP1	99	77.835	ENSPEMG00000006888	Tarbp1	90	77.835	Peromyscus_maniculatus_bairdii
ENSMLEG00000044182	TARBP1	90	83.495	ENSPCIG00000029710	TARBP1	81	83.495	Phascolarctos_cinereus
ENSMLEG00000044182	TARBP1	99	45.408	ENSPFOG00000013020	si:dkey-85a20.4	96	45.408	Poecilia_formosa
ENSMLEG00000044182	TARBP1	99	45.652	ENSPLAG00000006044	si:dkey-85a20.4	83	45.580	Poecilia_latipinna
ENSMLEG00000044182	TARBP1	99	45.773	ENSPMEG00000017857	si:dkey-85a20.4	83	45.700	Poecilia_mexicana
ENSMLEG00000044182	TARBP1	99	45.606	ENSPREG00000022753	si:dkey-85a20.4	83	45.461	Poecilia_reticulata
ENSMLEG00000044182	TARBP1	89	98.000	ENSPPYG00000000102	TARBP1	82	98.000	Pongo_abelii
ENSMLEG00000044182	TARBP1	82	93.333	ENSPCAG00000004808	TARBP1	69	93.333	Procavia_capensis
ENSMLEG00000044182	TARBP1	99	86.928	ENSPCOG00000005666	TARBP1	83	87.001	Propithecus_coquereli
ENSMLEG00000044182	TARBP1	99	67.621	ENSPVAG00000014798	TARBP1	84	67.621	Pteropus_vampyrus
ENSMLEG00000044182	TARBP1	99	45.474	ENSPNYG00000019135	si:dkey-85a20.4	83	45.474	Pundamilia_nyererei
ENSMLEG00000044182	TARBP1	100	71.091	ENSRNOG00000053574	Tarbp1	86	71.091	Rattus_norvegicus
ENSMLEG00000044182	TARBP1	100	91.667	ENSRBIG00000043362	TARBP1	92	91.667	Rhinopithecus_bieti
ENSMLEG00000044182	TARBP1	100	98.303	ENSRROG00000029527	TARBP1	87	98.303	Rhinopithecus_roxellana
ENSMLEG00000044182	TARBP1	99	95.048	ENSSBOG00000034503	TARBP1	97	95.048	Saimiri_boliviensis_boliviensis
ENSMLEG00000044182	TARBP1	99	75.461	ENSSHAG00000000013	TARBP1	100	75.461	Sarcophilus_harrisii
ENSMLEG00000044182	TARBP1	99	45.752	ENSSFOG00015002660	si:dkey-85a20.4	97	47.116	Scleropages_formosus
ENSMLEG00000044182	TARBP1	99	45.882	ENSSMAG00000007081	si:dkey-85a20.4	82	45.954	Scophthalmus_maximus
ENSMLEG00000044182	TARBP1	99	44.387	ENSSDUG00000023566	si:dkey-85a20.4	83	44.575	Seriola_dumerili
ENSMLEG00000044182	TARBP1	99	46.575	ENSSLDG00000020200	si:dkey-85a20.4	83	46.647	Seriola_lalandi_dorsalis
ENSMLEG00000044182	TARBP1	91	85.219	ENSSARG00000012207	TARBP1	76	85.219	Sorex_araneus
ENSMLEG00000044182	TARBP1	99	68.557	ENSSPUG00000015364	TARBP1	84	68.557	Sphenodon_punctatus
ENSMLEG00000044182	TARBP1	99	46.276	ENSSPAG00000007213	si:dkey-85a20.4	83	46.276	Stegastes_partitus
ENSMLEG00000044182	TARBP1	99	86.273	ENSSSCG00000010160	TARBP1	83	91.124	Sus_scrofa
ENSMLEG00000044182	TARBP1	96	68.144	ENSTGUG00000010214	TARBP1	100	68.144	Taeniopygia_guttata
ENSMLEG00000044182	TARBP1	99	44.679	ENSTNIG00000016586	si:dkey-85a20.4	99	44.752	Tetraodon_nigroviridis
ENSMLEG00000044182	TARBP1	94	83.085	ENSTTRG00000008707	TARBP1	83	83.085	Tursiops_truncatus
ENSMLEG00000044182	TARBP1	98	84.864	ENSUMAG00000006730	TARBP1	99	84.864	Ursus_maritimus
ENSMLEG00000044182	TARBP1	86	91.753	ENSVPAG00000007665	TARBP1	81	91.753	Vicugna_pacos
ENSMLEG00000044182	TARBP1	99	86.283	ENSVVUG00000007460	TARBP1	96	86.136	Vulpes_vulpes
ENSMLEG00000044182	TARBP1	99	56.598	ENSXETG00000016224	tarbp1	99	56.598	Xenopus_tropicalis
ENSMLEG00000044182	TARBP1	90	48.840	ENSXCOG00000011779	si:dkey-85a20.4	90	48.840	Xiphophorus_couchianus
ENSMLEG00000044182	TARBP1	77	43.216	ENSXMAG00000009600	si:dkey-85a20.4	100	43.123	Xiphophorus_maculatus