EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000000063 (Gene tree)
Gene ID: 102421062
Gene Symbol: -
Alias: -
Full Name: zinc finger C3HC-type containing 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 19963 bases
Position: chrGL429813:6636022-6655984
Accession: 102421062
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000000060	zf-C3HC	PF07967.13	2.7e-34	1	1
ENSMLUP00000000060	Rsm1	PF08600.10	2.8e-15	1	2
ENSMLUP00000000060	Rsm1	PF08600.10	2.8e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000000063	-	1515	XM_006088359	ENSMLUP00000000060	504 (aa)	XP_006088421	G1NSG0

Gene Model

Click here to download ENSMLUG00000000063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000000063's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000000063	-	67	94.752	ENSMLUG00000029228	-	99	94.752

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000000063	-	99	89.683	ENSG00000091732	ZC3HC1	99	89.683	Homo_sapiens
ENSMLUG00000000063	-	95	44.112	ENSAPOG00000009078	zc3hc1	95	43.574	Acanthochromis_polyacanthus
ENSMLUG00000000063	-	100	90.099	ENSAMEG00000005425	ZC3HC1	100	90.099	Ailuropoda_melanoleuca
ENSMLUG00000000063	-	95	42.942	ENSACIG00000019513	zc3hc1	95	42.970	Amphilophus_citrinellus
ENSMLUG00000000063	-	95	45.090	ENSAOCG00000024310	zc3hc1	95	44.556	Amphiprion_ocellaris
ENSMLUG00000000063	-	95	45.090	ENSAPEG00000004907	zc3hc1	95	44.556	Amphiprion_percula
ENSMLUG00000000063	-	81	47.653	ENSATEG00000016898	zc3hc1	85	47.786	Anabas_testudineus
ENSMLUG00000000063	-	88	59.955	ENSAPLG00000003832	ZC3HC1	99	59.955	Anas_platyrhynchos
ENSMLUG00000000063	-	100	58.801	ENSACAG00000001638	ZC3HC1	100	58.801	Anolis_carolinensis
ENSMLUG00000000063	-	100	88.515	ENSANAG00000022213	ZC3HC1	100	88.515	Aotus_nancymaae
ENSMLUG00000000063	-	88	44.681	ENSACLG00000025033	zc3hc1	98	44.681	Astatotilapia_calliptera
ENSMLUG00000000063	-	94	43.478	ENSAMXG00000036792	zc3hc1	97	43.243	Astyanax_mexicanus
ENSMLUG00000000063	-	100	88.515	ENSBTAG00000011247	ZC3HC1	100	88.515	Bos_taurus
ENSMLUG00000000063	-	100	89.307	ENSCJAG00000010536	ZC3HC1	100	89.307	Callithrix_jacchus
ENSMLUG00000000063	-	100	90.495	ENSCAFG00000028735	-	100	90.495	Canis_familiaris
ENSMLUG00000000063	-	100	90.495	ENSCAFG00000031850	-	100	90.495	Canis_familiaris
ENSMLUG00000000063	-	100	91.107	ENSCAFG00000001499	-	99	91.107	Canis_familiaris
ENSMLUG00000000063	-	100	90.495	ENSCAFG00000029401	-	99	90.495	Canis_familiaris
ENSMLUG00000000063	-	100	90.297	ENSCAFG00020006829	-	100	90.297	Canis_lupus_dingo
ENSMLUG00000000063	-	100	89.703	ENSCAFG00020023333	-	100	89.703	Canis_lupus_dingo
ENSMLUG00000000063	-	100	82.178	ENSCHIG00000014103	ZC3HC1	100	82.178	Capra_hircus
ENSMLUG00000000063	-	100	86.733	ENSTSYG00000002843	ZC3HC1	100	86.733	Carlito_syrichta
ENSMLUG00000000063	-	90	61.874	ENSCAPG00000016300	ZC3HC1	94	75.000	Cavia_aperea
ENSMLUG00000000063	-	100	82.970	ENSCPOG00000014034	ZC3HC1	100	82.376	Cavia_porcellus
ENSMLUG00000000063	-	100	72.475	ENSCCAG00000020384	ZC3HC1	100	88.106	Cebus_capucinus
ENSMLUG00000000063	-	100	89.703	ENSCATG00000023130	ZC3HC1	100	89.703	Cercocebus_atys
ENSMLUG00000000063	-	100	59.921	ENSCLAG00000008260	ZC3HC1	100	59.802	Chinchilla_lanigera
ENSMLUG00000000063	-	73	89.101	ENSCSAG00000009881	ZC3HC1	97	89.101	Chlorocebus_sabaeus
ENSMLUG00000000063	-	90	89.207	ENSCHOG00000011846	ZC3HC1	99	89.207	Choloepus_hoffmanni
ENSMLUG00000000063	-	96	67.485	ENSCPBG00000017519	ZC3HC1	100	66.667	Chrysemys_picta_bellii
ENSMLUG00000000063	-	100	89.703	ENSCANG00000029091	ZC3HC1	100	89.703	Colobus_angolensis_palliatus
ENSMLUG00000000063	-	100	84.752	ENSCGRG00001018805	Zc3hc1	100	84.752	Cricetulus_griseus_chok1gshd
ENSMLUG00000000063	-	100	83.564	ENSCGRG00000017114	Zc3hc1	100	83.564	Cricetulus_griseus_crigri
ENSMLUG00000000063	-	96	42.744	ENSCSEG00000009284	zc3hc1	94	42.744	Cynoglossus_semilaevis
ENSMLUG00000000063	-	94	42.770	ENSCVAG00000011566	zc3hc1	94	42.770	Cyprinodon_variegatus
ENSMLUG00000000063	-	95	46.122	ENSDARG00000062651	zc3hc1	95	46.122	Danio_rerio
ENSMLUG00000000063	-	100	87.525	ENSDNOG00000045016	ZC3HC1	100	87.525	Dasypus_novemcinctus
ENSMLUG00000000063	-	100	76.832	ENSDORG00000008697	Zc3hc1	100	76.832	Dipodomys_ordii
ENSMLUG00000000063	-	90	90.549	ENSEASG00005008789	ZC3HC1	97	90.549	Equus_asinus_asinus
ENSMLUG00000000063	-	100	89.921	ENSECAG00000017886	ZC3HC1	100	89.921	Equus_caballus
ENSMLUG00000000063	-	84	82.716	ENSEEUG00000003123	ZC3HC1	84	82.716	Erinaceus_europaeus
ENSMLUG00000000063	-	94	42.254	ENSELUG00000023168	zc3hc1	97	42.278	Esox_lucius
ENSMLUG00000000063	-	100	88.713	ENSFCAG00000010429	ZC3HC1	100	88.713	Felis_catus
ENSMLUG00000000063	-	90	59.829	ENSFALG00000005006	ZC3HC1	100	59.052	Ficedula_albicollis
ENSMLUG00000000063	-	100	84.752	ENSFDAG00000019897	ZC3HC1	100	84.752	Fukomys_damarensis
ENSMLUG00000000063	-	96	43.114	ENSFHEG00000020149	zc3hc1	99	42.308	Fundulus_heteroclitus
ENSMLUG00000000063	-	94	42.149	ENSGMOG00000002914	zc3hc1	95	42.149	Gadus_morhua
ENSMLUG00000000063	-	99	60.396	ENSGALG00000008003	ZC3HC1	99	59.802	Gallus_gallus
ENSMLUG00000000063	-	96	43.687	ENSGAFG00000016095	zc3hc1	96	43.713	Gambusia_affinis
ENSMLUG00000000063	-	94	45.194	ENSGACG00000019706	zc3hc1	94	45.010	Gasterosteus_aculeatus
ENSMLUG00000000063	-	77	67.857	ENSGAGG00000016106	ZC3HC1	100	67.857	Gopherus_agassizii
ENSMLUG00000000063	-	99	89.484	ENSGGOG00000015504	ZC3HC1	99	89.484	Gorilla_gorilla
ENSMLUG00000000063	-	94	43.496	ENSHBUG00000008347	zc3hc1	94	43.496	Haplochromis_burtoni
ENSMLUG00000000063	-	100	86.931	ENSHGLG00000005085	ZC3HC1	100	86.931	Heterocephalus_glaber_female
ENSMLUG00000000063	-	100	86.733	ENSHGLG00100011395	ZC3HC1	100	86.733	Heterocephalus_glaber_male
ENSMLUG00000000063	-	95	43.205	ENSHCOG00000014309	zc3hc1	95	43.320	Hippocampus_comes
ENSMLUG00000000063	-	100	85.941	ENSSTOG00000023599	-	100	85.941	Ictidomys_tridecemlineatus
ENSMLUG00000000063	-	94	43.408	ENSKMAG00000015315	zc3hc1	88	43.205	Kryptolebias_marmoratus
ENSMLUG00000000063	-	95	44.489	ENSLBEG00000017325	zc3hc1	95	44.000	Labrus_bergylta
ENSMLUG00000000063	-	79	54.878	ENSLACG00000013032	ZC3HC1	97	54.878	Latimeria_chalumnae
ENSMLUG00000000063	-	99	50.980	ENSLOCG00000015963	zc3hc1	99	51.468	Lepisosteus_oculatus
ENSMLUG00000000063	-	100	87.377	ENSLAFG00000001292	ZC3HC1	100	87.377	Loxodonta_africana
ENSMLUG00000000063	-	100	89.901	ENSMFAG00000030176	ZC3HC1	100	90.087	Macaca_fascicularis
ENSMLUG00000000063	-	100	88.911	ENSMMUG00000006155	ZC3HC1	100	88.911	Macaca_mulatta
ENSMLUG00000000063	-	100	90.099	ENSMNEG00000011833	ZC3HC1	100	90.099	Macaca_nemestrina
ENSMLUG00000000063	-	100	89.901	ENSMLEG00000027328	ZC3HC1	100	89.901	Mandrillus_leucophaeus
ENSMLUG00000000063	-	95	44.578	ENSMAMG00000010691	zc3hc1	95	44.378	Mastacembelus_armatus
ENSMLUG00000000063	-	94	43.293	ENSMZEG00005007142	zc3hc1	94	43.293	Maylandia_zebra
ENSMLUG00000000063	-	99	59.804	ENSMGAG00000002977	ZC3HC1	99	60.392	Meleagris_gallopavo
ENSMLUG00000000063	-	81	78.365	ENSMAUG00000017032	Zc3hc1	92	78.365	Mesocricetus_auratus
ENSMLUG00000000063	-	100	88.515	ENSMICG00000009167	ZC3HC1	100	88.515	Microcebus_murinus
ENSMLUG00000000063	-	100	84.752	ENSMOCG00000015239	Zc3hc1	100	84.752	Microtus_ochrogaster
ENSMLUG00000000063	-	86	43.805	ENSMMOG00000002204	zc3hc1	99	42.857	Mola_mola
ENSMLUG00000000063	-	100	62.524	ENSMODG00000014630	ZC3HC1	100	60.803	Monodelphis_domestica
ENSMLUG00000000063	-	94	42.363	ENSMALG00000014447	zc3hc1	95	42.339	Monopterus_albus
ENSMLUG00000000063	-	100	83.762	MGP_CAROLIEiJ_G0028183	Zc3hc1	100	83.762	Mus_caroli
ENSMLUG00000000063	-	100	83.168	ENSMUSG00000039130	Zc3hc1	100	83.168	Mus_musculus
ENSMLUG00000000063	-	100	77.030	MGP_PahariEiJ_G0021941	Zc3hc1	100	77.030	Mus_pahari
ENSMLUG00000000063	-	100	83.366	MGP_SPRETEiJ_G0029183	Zc3hc1	100	83.366	Mus_spretus
ENSMLUG00000000063	-	95	88.382	ENSMPUG00000005297	ZC3HC1	95	88.382	Mustela_putorius_furo
ENSMLUG00000000063	-	100	85.178	ENSNGAG00000019014	Zc3hc1	100	85.178	Nannospalax_galili
ENSMLUG00000000063	-	94	43.381	ENSNBRG00000004577	zc3hc1	94	43.381	Neolamprologus_brichardi
ENSMLUG00000000063	-	99	88.690	ENSNLEG00000012698	ZC3HC1	99	88.690	Nomascus_leucogenys
ENSMLUG00000000063	-	100	77.030	ENSMEUG00000011023	ZC3HC1	100	77.030	Notamacropus_eugenii
ENSMLUG00000000063	-	65	80.695	ENSOPRG00000007867	-	67	80.695	Ochotona_princeps
ENSMLUG00000000063	-	100	82.178	ENSODEG00000014604	ZC3HC1	100	82.173	Octodon_degus
ENSMLUG00000000063	-	94	43.902	ENSONIG00000011644	zc3hc1	94	43.902	Oreochromis_niloticus
ENSMLUG00000000063	-	90	67.312	ENSOANG00000011460	ZC3HC1	100	67.312	Ornithorhynchus_anatinus
ENSMLUG00000000063	-	100	83.794	ENSOCUG00000017137	ZC3HC1	100	83.794	Oryctolagus_cuniculus
ENSMLUG00000000063	-	95	42.915	ENSORLG00000014409	zc3hc1	94	42.713	Oryzias_latipes
ENSMLUG00000000063	-	95	43.750	ENSORLG00020015874	zc3hc1	94	43.548	Oryzias_latipes_hni
ENSMLUG00000000063	-	95	43.347	ENSORLG00015014641	zc3hc1	94	43.145	Oryzias_latipes_hsok
ENSMLUG00000000063	-	95	44.398	ENSOMEG00000000215	zc3hc1	95	44.148	Oryzias_melastigma
ENSMLUG00000000063	-	95	44.398	ENSOMEG00000020604	zc3hc1	95	44.148	Oryzias_melastigma
ENSMLUG00000000063	-	100	82.772	ENSOGAG00000026193	ZC3HC1	100	82.772	Otolemur_garnettii
ENSMLUG00000000063	-	100	89.921	ENSOARG00000004907	ZC3HC1	99	89.921	Ovis_aries
ENSMLUG00000000063	-	99	89.683	ENSPPAG00000043172	ZC3HC1	99	89.683	Pan_paniscus
ENSMLUG00000000063	-	100	87.921	ENSPPRG00000001004	ZC3HC1	100	87.921	Panthera_pardus
ENSMLUG00000000063	-	100	88.515	ENSPTIG00000007823	ZC3HC1	100	88.515	Panthera_tigris_altaica
ENSMLUG00000000063	-	99	89.683	ENSPTRG00000019685	ZC3HC1	99	89.683	Pan_troglodytes
ENSMLUG00000000063	-	100	88.911	ENSPANG00000014229	ZC3HC1	100	88.911	Papio_anubis
ENSMLUG00000000063	-	95	47.216	ENSPKIG00000007172	zc3hc1	95	45.979	Paramormyrops_kingsleyae
ENSMLUG00000000063	-	93	62.839	ENSPSIG00000016646	ZC3HC1	100	60.194	Pelodiscus_sinensis
ENSMLUG00000000063	-	93	39.634	ENSPMGG00000003548	zc3hc1	93	40.041	Periophthalmus_magnuspinnatus
ENSMLUG00000000063	-	100	84.158	ENSPEMG00000000514	Zc3hc1	100	84.158	Peromyscus_maniculatus_bairdii
ENSMLUG00000000063	-	99	74.206	ENSPCIG00000020619	ZC3HC1	100	77.949	Phascolarctos_cinereus
ENSMLUG00000000063	-	96	43.287	ENSPFOG00000003466	zc3hc1	96	43.313	Poecilia_formosa
ENSMLUG00000000063	-	96	42.886	ENSPLAG00000022211	zc3hc1	96	42.914	Poecilia_latipinna
ENSMLUG00000000063	-	96	43.287	ENSPMEG00000001458	zc3hc1	96	43.313	Poecilia_mexicana
ENSMLUG00000000063	-	96	43.086	ENSPREG00000004004	zc3hc1	96	43.114	Poecilia_reticulata
ENSMLUG00000000063	-	99	81.621	ENSPPYG00000017998	ZC3HC1	99	81.621	Pongo_abelii
ENSMLUG00000000063	-	92	83.801	ENSPCAG00000001182	ZC3HC1	100	83.801	Procavia_capensis
ENSMLUG00000000063	-	100	89.703	ENSPCOG00000017354	ZC3HC1	100	89.703	Propithecus_coquereli
ENSMLUG00000000063	-	100	84.158	ENSPVAG00000003195	ZC3HC1	100	84.158	Pteropus_vampyrus
ENSMLUG00000000063	-	94	43.293	ENSPNYG00000020692	zc3hc1	94	43.293	Pundamilia_nyererei
ENSMLUG00000000063	-	93	44.050	ENSPNAG00000020746	zc3hc1	95	43.958	Pygocentrus_nattereri
ENSMLUG00000000063	-	100	83.762	ENSRNOG00000010154	Zc3hc1	100	83.762	Rattus_norvegicus
ENSMLUG00000000063	-	90	89.912	ENSRBIG00000029409	ZC3HC1	100	89.912	Rhinopithecus_bieti
ENSMLUG00000000063	-	100	89.703	ENSRROG00000041831	ZC3HC1	100	89.703	Rhinopithecus_roxellana
ENSMLUG00000000063	-	88	87.681	ENSSBOG00000032787	ZC3HC1	100	87.681	Saimiri_boliviensis_boliviensis
ENSMLUG00000000063	-	92	78.112	ENSSHAG00000002529	ZC3HC1	100	78.112	Sarcophilus_harrisii
ENSMLUG00000000063	-	95	49.693	ENSSFOG00015003667	zc3hc1	91	49.489	Scleropages_formosus
ENSMLUG00000000063	-	95	44.689	ENSSMAG00000000647	zc3hc1	86	44.890	Scophthalmus_maximus
ENSMLUG00000000063	-	95	44.534	ENSSDUG00000004241	zc3hc1	93	44.556	Seriola_dumerili
ENSMLUG00000000063	-	95	44.332	ENSSLDG00000025056	zc3hc1	93	44.355	Seriola_lalandi_dorsalis
ENSMLUG00000000063	-	99	76.984	ENSSARG00000012013	ZC3HC1	99	76.984	Sorex_araneus
ENSMLUG00000000063	-	85	57.471	ENSSPUG00000000778	ZC3HC1	85	57.604	Sphenodon_punctatus
ENSMLUG00000000063	-	95	45.783	ENSSPAG00000020041	zc3hc1	95	45.800	Stegastes_partitus
ENSMLUG00000000063	-	100	88.317	ENSSSCG00000016565	ZC3HC1	100	88.462	Sus_scrofa
ENSMLUG00000000063	-	94	42.029	ENSTRUG00000020077	zc3hc1	95	42.008	Takifugu_rubripes
ENSMLUG00000000063	-	94	41.889	ENSTNIG00000007585	zc3hc1	99	40.900	Tetraodon_nigroviridis
ENSMLUG00000000063	-	89	87.209	ENSTBEG00000005216	ZC3HC1	99	77.381	Tupaia_belangeri
ENSMLUG00000000063	-	95	89.855	ENSTTRG00000008458	ZC3HC1	100	89.855	Tursiops_truncatus
ENSMLUG00000000063	-	100	89.703	ENSUAMG00000020249	ZC3HC1	100	89.703	Ursus_americanus
ENSMLUG00000000063	-	100	89.307	ENSUMAG00000009268	ZC3HC1	100	89.307	Ursus_maritimus
ENSMLUG00000000063	-	78	89.796	ENSVPAG00000010846	ZC3HC1	77	89.796	Vicugna_pacos
ENSMLUG00000000063	-	96	90.062	ENSVVUG00000012386	ZC3HC1	99	90.062	Vulpes_vulpes
ENSMLUG00000000063	-	91	52.258	ENSXETG00000033900	zc3hc1	95	51.183	Xenopus_tropicalis
ENSMLUG00000000063	-	96	43.200	ENSXCOG00000013570	zc3hc1	96	43.227	Xiphophorus_couchianus
ENSMLUG00000000063	-	86	45.354	ENSXMAG00000010979	zc3hc1	95	45.316	Xiphophorus_maculatus