EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000000228 (Gene tree)
Gene ID: 102420686
Gene Symbol: UPF2
Alias: DKFZP434D222|KIAA1408|RENT2|smg-3
Full Name: UPF2%2C regulator of nonsense mediated mRNA decay
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 120576 bases
Position: chrGL429990:896183-1016758
Accession: 102420686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000000211	Upf2	PF04050.14	6.9e-33	1	1
ENSMLUP00000000211	MIF4G	PF02854.19	9.3e-76	1	3
ENSMLUP00000000211	MIF4G	PF02854.19	9.3e-76	2	3
ENSMLUP00000000211	MIF4G	PF02854.19	9.3e-76	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000000229	UPF2-201	3822	XM_006098215	ENSMLUP00000000211	1273 (aa)	XP_006098277	G1NSU1

Gene Model

Click here to download ENSMLUG00000000228's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000000228's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000000228	UPF2	100	97.017	ENSG00000151461	UPF2	99	97.017	Homo_sapiens
ENSMLUG00000000228	UPF2	100	78.298	ENSAPOG00000015837	UPF2	100	78.030	Acanthochromis_polyacanthus
ENSMLUG00000000228	UPF2	100	98.272	ENSAMEG00000004586	UPF2	99	98.272	Ailuropoda_melanoleuca
ENSMLUG00000000228	UPF2	100	82.179	ENSACIG00000018078	UPF2	100	81.995	Amphilophus_citrinellus
ENSMLUG00000000228	UPF2	100	82.399	ENSAOCG00000016766	UPF2	99	82.371	Amphiprion_ocellaris
ENSMLUG00000000228	UPF2	100	82.477	ENSAPEG00000019084	UPF2	99	82.449	Amphiprion_percula
ENSMLUG00000000228	UPF2	100	82.376	ENSATEG00000021677	UPF2	99	82.321	Anabas_testudineus
ENSMLUG00000000228	UPF2	100	86.499	ENSAPLG00000010287	UPF2	90	90.720	Anas_platyrhynchos
ENSMLUG00000000228	UPF2	100	91.595	ENSACAG00000009259	UPF2	99	91.673	Anolis_carolinensis
ENSMLUG00000000228	UPF2	100	86.520	ENSANAG00000028451	UPF2	99	85.345	Aotus_nancymaae
ENSMLUG00000000228	UPF2	100	80.685	ENSACLG00000012696	UPF2	99	82.449	Astatotilapia_calliptera
ENSMLUG00000000228	UPF2	100	82.866	ENSAMXG00000013700	UPF2	99	82.812	Astyanax_mexicanus
ENSMLUG00000000228	UPF2	100	97.958	ENSBTAG00000000288	UPF2	99	97.958	Bos_taurus
ENSMLUG00000000228	UPF2	100	96.939	ENSCJAG00000020685	UPF2	99	96.939	Callithrix_jacchus
ENSMLUG00000000228	UPF2	100	98.193	ENSCAFG00000004839	UPF2	99	98.193	Canis_familiaris
ENSMLUG00000000228	UPF2	100	95.915	ENSCAFG00020005882	UPF2	98	97.931	Canis_lupus_dingo
ENSMLUG00000000228	UPF2	100	98.036	ENSCHIG00000020359	UPF2	99	98.036	Capra_hircus
ENSMLUG00000000228	UPF2	100	96.936	ENSTSYG00000000935	UPF2	97	100.000	Carlito_syrichta
ENSMLUG00000000228	UPF2	92	86.964	ENSCAPG00000016658	UPF2	95	86.535	Cavia_aperea
ENSMLUG00000000228	UPF2	99	95.415	ENSCPOG00000008809	UPF2	99	95.415	Cavia_porcellus
ENSMLUG00000000228	UPF2	100	90.259	ENSCCAG00000035991	UPF2	99	90.659	Cebus_capucinus
ENSMLUG00000000228	UPF2	100	97.174	ENSCATG00000032679	UPF2	99	97.174	Cercocebus_atys
ENSMLUG00000000228	UPF2	100	97.172	ENSCLAG00000011434	UPF2	99	97.172	Chinchilla_lanigera
ENSMLUG00000000228	UPF2	100	97.253	ENSCSAG00000013372	UPF2	99	97.253	Chlorocebus_sabaeus
ENSMLUG00000000228	UPF2	87	97.778	ENSCHOG00000000422	UPF2	89	97.778	Choloepus_hoffmanni
ENSMLUG00000000228	UPF2	100	92.223	ENSCPBG00000027823	UPF2	100	92.145	Chrysemys_picta_bellii
ENSMLUG00000000228	UPF2	79	49.023	ENSCSAVG00000007772	-	99	48.327	Ciona_savignyi
ENSMLUG00000000228	UPF2	100	90.576	ENSCANG00000040396	UPF2	100	90.902	Colobus_angolensis_palliatus
ENSMLUG00000000228	UPF2	100	97.329	ENSCGRG00001019347	Upf2	99	97.329	Cricetulus_griseus_chok1gshd
ENSMLUG00000000228	UPF2	100	97.329	ENSCGRG00000017993	Upf2	99	97.329	Cricetulus_griseus_crigri
ENSMLUG00000000228	UPF2	91	80.895	ENSCSEG00000003520	UPF2	91	80.446	Cynoglossus_semilaevis
ENSMLUG00000000228	UPF2	99	82.039	ENSCVAG00000006167	UPF2	100	81.461	Cyprinodon_variegatus
ENSMLUG00000000228	UPF2	100	97.800	ENSDNOG00000018160	UPF2	99	97.800	Dasypus_novemcinctus
ENSMLUG00000000228	UPF2	100	97.251	ENSDORG00000002478	Upf2	99	97.251	Dipodomys_ordii
ENSMLUG00000000228	UPF2	68	100.000	ENSETEG00000011583	-	66	100.000	Echinops_telfairi
ENSMLUG00000000228	UPF2	69	68.398	ENSEBUG00000012448	-	87	72.483	Eptatretus_burgeri
ENSMLUG00000000228	UPF2	100	98.350	ENSEASG00005019274	UPF2	99	98.447	Equus_asinus_asinus
ENSMLUG00000000228	UPF2	100	98.429	ENSECAG00000017022	UPF2	99	98.429	Equus_caballus
ENSMLUG00000000228	UPF2	82	94.534	ENSEEUG00000007819	UPF2	77	94.534	Erinaceus_europaeus
ENSMLUG00000000228	UPF2	100	81.357	ENSELUG00000012014	UPF2	99	82.002	Esox_lucius
ENSMLUG00000000228	UPF2	100	99.441	ENSFCAG00000005785	UPF2	99	98.036	Felis_catus
ENSMLUG00000000228	UPF2	100	93.166	ENSFALG00000001889	UPF2	98	93.244	Ficedula_albicollis
ENSMLUG00000000228	UPF2	100	96.858	ENSFDAG00000014348	UPF2	99	96.858	Fukomys_damarensis
ENSMLUG00000000228	UPF2	99	82.595	ENSFHEG00000009826	UPF2	99	82.106	Fundulus_heteroclitus
ENSMLUG00000000228	UPF2	91	82.414	ENSGMOG00000005557	UPF2	91	82.877	Gadus_morhua
ENSMLUG00000000228	UPF2	100	93.485	ENSGALG00000033772	UPF2	99	93.564	Gallus_gallus
ENSMLUG00000000228	UPF2	100	79.251	ENSGAFG00000020867	UPF2	99	81.123	Gambusia_affinis
ENSMLUG00000000228	UPF2	91	83.921	ENSGACG00000001080	UPF2	100	81.903	Gasterosteus_aculeatus
ENSMLUG00000000228	UPF2	100	92.459	ENSGAGG00000002700	UPF2	99	92.537	Gopherus_agassizii
ENSMLUG00000000228	UPF2	100	97.017	ENSGGOG00000001479	UPF2	99	97.017	Gorilla_gorilla
ENSMLUG00000000228	UPF2	100	80.685	ENSHBUG00000004249	UPF2	100	82.449	Haplochromis_burtoni
ENSMLUG00000000228	UPF2	100	85.782	ENSHGLG00000003822	-	99	84.603	Heterocephalus_glaber_female
ENSMLUG00000000228	UPF2	100	97.251	ENSHGLG00000015176	-	99	97.251	Heterocephalus_glaber_female
ENSMLUG00000000228	UPF2	100	93.559	ENSHGLG00100010036	UPF2	100	93.323	Heterocephalus_glaber_male
ENSMLUG00000000228	UPF2	100	80.838	ENSHCOG00000004025	UPF2	99	80.497	Hippocampus_comes
ENSMLUG00000000228	UPF2	100	81.669	ENSIPUG00000015524	UPF2	99	81.889	Ictalurus_punctatus
ENSMLUG00000000228	UPF2	100	97.408	ENSSTOG00000013075	UPF2	99	97.408	Ictidomys_tridecemlineatus
ENSMLUG00000000228	UPF2	100	95.994	ENSJJAG00000004913	Upf2	99	95.994	Jaculus_jaculus
ENSMLUG00000000228	UPF2	92	84.112	ENSKMAG00000001071	UPF2	92	83.973	Kryptolebias_marmoratus
ENSMLUG00000000228	UPF2	100	82.700	ENSLBEG00000016394	-	99	82.646	Labrus_bergylta
ENSMLUG00000000228	UPF2	80	81.800	ENSLBEG00000000728	-	93	81.765	Labrus_bergylta
ENSMLUG00000000228	UPF2	99	79.375	ENSLACG00000015945	UPF2	100	79.844	Latimeria_chalumnae
ENSMLUG00000000228	UPF2	99	85.681	ENSLOCG00000015698	UPF2	99	85.681	Lepisosteus_oculatus
ENSMLUG00000000228	UPF2	100	97.096	ENSMFAG00000043865	UPF2	99	97.096	Macaca_fascicularis
ENSMLUG00000000228	UPF2	100	97.096	ENSMMUG00000008241	UPF2	99	97.096	Macaca_mulatta
ENSMLUG00000000228	UPF2	81	96.404	ENSMNEG00000008062	UPF2	100	96.404	Macaca_nemestrina
ENSMLUG00000000228	UPF2	95	99.272	ENSMLEG00000036120	UPF2	99	99.272	Mandrillus_leucophaeus
ENSMLUG00000000228	UPF2	100	82.453	ENSMAMG00000018276	UPF2	99	82.243	Mastacembelus_armatus
ENSMLUG00000000228	UPF2	100	80.685	ENSMZEG00005021595	UPF2	99	82.449	Maylandia_zebra
ENSMLUG00000000228	UPF2	99	92.852	ENSMGAG00000004573	UPF2	99	92.930	Meleagris_gallopavo
ENSMLUG00000000228	UPF2	100	95.051	ENSMAUG00000016512	Upf2	99	95.051	Mesocricetus_auratus
ENSMLUG00000000228	UPF2	95	99.490	ENSMICG00000001716	UPF2	99	99.490	Microcebus_murinus
ENSMLUG00000000228	UPF2	100	97.015	ENSMOCG00000008263	Upf2	99	97.015	Microtus_ochrogaster
ENSMLUG00000000228	UPF2	90	82.914	ENSMMOG00000006528	UPF2	100	79.345	Mola_mola
ENSMLUG00000000228	UPF2	100	95.287	ENSMODG00000016794	UPF2	99	95.365	Monodelphis_domestica
ENSMLUG00000000228	UPF2	100	82.151	ENSMALG00000002663	UPF2	100	81.939	Monopterus_albus
ENSMLUG00000000228	UPF2	100	96.701	MGP_CAROLIEiJ_G0023157	Upf2	99	97.706	Mus_caroli
ENSMLUG00000000228	UPF2	100	97.093	ENSMUSG00000043241	Upf2	99	97.897	Mus_musculus
ENSMLUG00000000228	UPF2	100	96.779	MGP_PahariEiJ_G0019217	Upf2	99	97.706	Mus_pahari
ENSMLUG00000000228	UPF2	100	97.251	MGP_SPRETEiJ_G0024075	Upf2	99	97.897	Mus_spretus
ENSMLUG00000000228	UPF2	100	98.272	ENSMPUG00000001064	UPF2	99	98.272	Mustela_putorius_furo
ENSMLUG00000000228	UPF2	100	80.685	ENSNBRG00000013629	UPF2	99	82.449	Neolamprologus_brichardi
ENSMLUG00000000228	UPF2	100	97.017	ENSNLEG00000012058	UPF2	99	97.017	Nomascus_leucogenys
ENSMLUG00000000228	UPF2	51	98.446	ENSMEUG00000002180	-	59	98.446	Notamacropus_eugenii
ENSMLUG00000000228	UPF2	82	99.296	ENSOPRG00000006801	-	82	99.296	Ochotona_princeps
ENSMLUG00000000228	UPF2	100	97.172	ENSODEG00000001290	UPF2	99	97.172	Octodon_degus
ENSMLUG00000000228	UPF2	100	80.685	ENSONIG00000017991	UPF2	99	82.449	Oreochromis_niloticus
ENSMLUG00000000228	UPF2	100	96.562	ENSOCUG00000006230	UPF2	100	96.562	Oryctolagus_cuniculus
ENSMLUG00000000228	UPF2	100	81.197	ENSORLG00000017189	UPF2	99	81.669	Oryzias_latipes
ENSMLUG00000000228	UPF2	100	81.197	ENSORLG00020005969	UPF2	99	81.669	Oryzias_latipes_hni
ENSMLUG00000000228	UPF2	100	81.197	ENSORLG00015005713	UPF2	99	81.669	Oryzias_latipes_hsok
ENSMLUG00000000228	UPF2	100	79.082	ENSOMEG00000023420	UPF2	98	78.767	Oryzias_melastigma
ENSMLUG00000000228	UPF2	100	97.093	ENSOGAG00000005796	UPF2	99	97.093	Otolemur_garnettii
ENSMLUG00000000228	UPF2	100	97.882	ENSOARG00000014587	UPF2	99	97.882	Ovis_aries
ENSMLUG00000000228	UPF2	100	92.829	ENSPPAG00000037953	UPF2	100	93.250	Pan_paniscus
ENSMLUG00000000228	UPF2	100	98.036	ENSPPRG00000000690	UPF2	99	98.036	Panthera_pardus
ENSMLUG00000000228	UPF2	100	98.036	ENSPTIG00000008867	UPF2	99	98.036	Panthera_tigris_altaica
ENSMLUG00000000228	UPF2	100	97.017	ENSPTRG00000002291	UPF2	99	97.017	Pan_troglodytes
ENSMLUG00000000228	UPF2	100	97.096	ENSPANG00000023399	UPF2	99	97.096	Papio_anubis
ENSMLUG00000000228	UPF2	100	79.984	ENSPKIG00000025502	UPF2	99	80.763	Paramormyrops_kingsleyae
ENSMLUG00000000228	UPF2	59	90.489	ENSPSIG00000015158	UPF2	95	90.489	Pelodiscus_sinensis
ENSMLUG00000000228	UPF2	100	80.579	ENSPMGG00000005259	UPF2	100	80.471	Periophthalmus_magnuspinnatus
ENSMLUG00000000228	UPF2	93	96.210	ENSPEMG00000015731	Upf2	99	96.210	Peromyscus_maniculatus_bairdii
ENSMLUG00000000228	UPF2	100	95.051	ENSPCIG00000006656	UPF2	100	95.130	Phascolarctos_cinereus
ENSMLUG00000000228	UPF2	100	79.283	ENSPFOG00000017118	UPF2	99	81.279	Poecilia_formosa
ENSMLUG00000000228	UPF2	100	79.283	ENSPLAG00000005094	UPF2	99	81.279	Poecilia_latipinna
ENSMLUG00000000228	UPF2	100	79.283	ENSPMEG00000017009	UPF2	99	81.279	Poecilia_mexicana
ENSMLUG00000000228	UPF2	100	79.469	ENSPREG00000021880	UPF2	100	81.704	Poecilia_reticulata
ENSMLUG00000000228	UPF2	66	98.327	ENSPPYG00000002089	-	99	98.327	Pongo_abelii
ENSMLUG00000000228	UPF2	100	82.875	ENSPCAG00000000684	UPF2	99	82.875	Procavia_capensis
ENSMLUG00000000228	UPF2	100	94.501	ENSPCOG00000021656	UPF2	100	94.658	Propithecus_coquereli
ENSMLUG00000000228	UPF2	100	91.202	ENSPVAG00000017286	UPF2	99	91.202	Pteropus_vampyrus
ENSMLUG00000000228	UPF2	100	78.271	ENSPNYG00000017096	UPF2	100	80.031	Pundamilia_nyererei
ENSMLUG00000000228	UPF2	100	82.788	ENSPNAG00000009357	UPF2	99	83.229	Pygocentrus_nattereri
ENSMLUG00000000228	UPF2	100	90.681	ENSRNOG00000023593	Upf2	98	100.000	Rattus_norvegicus
ENSMLUG00000000228	UPF2	100	96.072	ENSRBIG00000037780	UPF2	100	96.072	Rhinopithecus_bieti
ENSMLUG00000000228	UPF2	100	97.017	ENSRROG00000043547	UPF2	99	97.017	Rhinopithecus_roxellana
ENSMLUG00000000228	UPF2	100	96.939	ENSSBOG00000020012	UPF2	99	96.939	Saimiri_boliviensis_boliviensis
ENSMLUG00000000228	UPF2	100	80.901	ENSSFOG00015023788	upf2	100	81.542	Scleropages_formosus
ENSMLUG00000000228	UPF2	90	82.368	ENSSMAG00000007637	UPF2	100	78.748	Scophthalmus_maximus
ENSMLUG00000000228	UPF2	100	82.243	ENSSDUG00000017244	UPF2	99	82.527	Seriola_dumerili
ENSMLUG00000000228	UPF2	100	80.562	ENSSLDG00000016866	UPF2	100	80.923	Seriola_lalandi_dorsalis
ENSMLUG00000000228	UPF2	100	95.208	ENSSARG00000008615	UPF2	99	95.287	Sorex_araneus
ENSMLUG00000000228	UPF2	100	89.631	ENSSPUG00000014544	UPF2	99	89.709	Sphenodon_punctatus
ENSMLUG00000000228	UPF2	68	98.391	ENSSSCG00000011117	-	99	98.391	Sus_scrofa
ENSMLUG00000000228	UPF2	99	93.160	ENSTGUG00000002163	-	100	93.239	Taeniopygia_guttata
ENSMLUG00000000228	UPF2	100	81.804	ENSTRUG00000007519	UPF2	99	81.669	Takifugu_rubripes
ENSMLUG00000000228	UPF2	100	79.193	ENSTNIG00000004453	UPF2	99	78.738	Tetraodon_nigroviridis
ENSMLUG00000000228	UPF2	93	88.945	ENSTBEG00000012679	UPF2	93	89.367	Tupaia_belangeri
ENSMLUG00000000228	UPF2	100	97.800	ENSTTRG00000016388	UPF2	99	97.800	Tursiops_truncatus
ENSMLUG00000000228	UPF2	95	100.000	ENSUAMG00000023560	UPF2	99	100.000	Ursus_americanus
ENSMLUG00000000228	UPF2	100	98.350	ENSUMAG00000012953	UPF2	95	98.350	Ursus_maritimus
ENSMLUG00000000228	UPF2	85	96.774	ENSVPAG00000006763	UPF2	85	96.774	Vicugna_pacos
ENSMLUG00000000228	UPF2	100	98.115	ENSVVUG00000006166	UPF2	99	98.115	Vulpes_vulpes
ENSMLUG00000000228	UPF2	100	82.022	ENSXETG00000033103	UPF2	99	81.481	Xenopus_tropicalis
ENSMLUG00000000228	UPF2	92	83.560	ENSXCOG00000011604	UPF2	100	80.967	Xiphophorus_couchianus
ENSMLUG00000000228	UPF2	92	83.901	ENSXMAG00000017209	UPF2	99	80.967	Xiphophorus_maculatus