EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000000468 (Gene tree)
Gene ID: 102429334
Gene Symbol: SMARCA5
Alias: ISWI|hISWI|hSNF2H
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 35755 bases
Position: chrGL429768:14745910-14781664
Accession: 102429334
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000000433	ResIII	PF04851.15	5.3e-11	1	1
ENSMLUP00000000433	DEAD	PF00270.29	3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000000476	SMARCA5-201	3497	XM_006081731	ENSMLUP00000000433	1052 (aa)	XP_006081793	G1NTE1

Gene Model

Click here to download ENSMLUG00000000468's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000000468's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000000468	SMARCA5	93	83.317	ENSMLUG00000029614	SMARCA1	93	83.317
ENSMLUG00000000468	SMARCA5	54	42.314	ENSMLUG00000007573	CHD1L	62	42.314

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000000468	SMARCA5	100	98.764	ENSG00000153147	SMARCA5	100	98.764	Homo_sapiens
ENSMLUG00000000468	SMARCA5	100	99.240	ENSAMEG00000009585	SMARCA5	100	99.240	Ailuropoda_melanoleuca
ENSMLUG00000000468	SMARCA5	91	96.920	ENSAPLG00000009206	SMARCA5	100	96.920	Anas_platyrhynchos
ENSMLUG00000000468	SMARCA5	98	94.010	ENSACAG00000003038	SMARCA5	99	94.010	Anolis_carolinensis
ENSMLUG00000000468	SMARCA5	100	98.669	ENSANAG00000019345	SMARCA5	100	98.669	Aotus_nancymaae
ENSMLUG00000000468	SMARCA5	100	98.764	ENSBTAG00000003399	SMARCA5	100	98.764	Bos_taurus
ENSMLUG00000000468	SMARCA5	100	98.859	ENSCJAG00000002735	SMARCA5	100	98.859	Callithrix_jacchus
ENSMLUG00000000468	SMARCA5	100	99.144	ENSCAFG00000007525	SMARCA5	100	99.144	Canis_familiaris
ENSMLUG00000000468	SMARCA5	98	99.128	ENSCAFG00020025641	SMARCA5	99	99.128	Canis_lupus_dingo
ENSMLUG00000000468	SMARCA5	100	99.144	ENSCHIG00000013730	-	100	99.144	Capra_hircus
ENSMLUG00000000468	SMARCA5	100	97.433	ENSCHIG00000016375	-	100	97.433	Capra_hircus
ENSMLUG00000000468	SMARCA5	99	95.889	ENSTSYG00000009954	SMARCA5	99	99.698	Carlito_syrichta
ENSMLUG00000000468	SMARCA5	92	99.277	ENSCAPG00000013747	SMARCA5	95	99.277	Cavia_aperea
ENSMLUG00000000468	SMARCA5	100	98.099	ENSCPOG00000002259	SMARCA5	100	98.099	Cavia_porcellus
ENSMLUG00000000468	SMARCA5	100	98.859	ENSCCAG00000027215	SMARCA5	100	98.859	Cebus_capucinus
ENSMLUG00000000468	SMARCA5	100	98.859	ENSCATG00000044917	SMARCA5	100	98.859	Cercocebus_atys
ENSMLUG00000000468	SMARCA5	96	98.121	ENSCLAG00000006153	SMARCA5	100	99.597	Chinchilla_lanigera
ENSMLUG00000000468	SMARCA5	92	99.690	ENSCSAG00000003448	SMARCA5	100	99.690	Chlorocebus_sabaeus
ENSMLUG00000000468	SMARCA5	90	98.633	ENSCHOG00000011724	SMARCA5	90	98.633	Choloepus_hoffmanni
ENSMLUG00000000468	SMARCA5	95	98.395	ENSCPBG00000027535	SMARCA5	96	98.198	Chrysemys_picta_bellii
ENSMLUG00000000468	SMARCA5	100	98.669	ENSCANG00000041629	SMARCA5	100	98.669	Colobus_angolensis_palliatus
ENSMLUG00000000468	SMARCA5	99	98.099	ENSCGRG00001012719	Smarca5	99	98.099	Cricetulus_griseus_chok1gshd
ENSMLUG00000000468	SMARCA5	95	99.498	ENSCGRG00000001417	Smarca5	99	99.698	Cricetulus_griseus_crigri
ENSMLUG00000000468	SMARCA5	98	95.745	ENSDNOG00000009158	SMARCA5	97	96.271	Dasypus_novemcinctus
ENSMLUG00000000468	SMARCA5	90	90.928	ENSDORG00000003466	Smarca5	97	90.928	Dipodomys_ordii
ENSMLUG00000000468	SMARCA5	92	85.744	ENSEBUG00000014773	SMARCA5	96	85.744	Eptatretus_burgeri
ENSMLUG00000000468	SMARCA5	100	99.335	ENSEASG00005001866	SMARCA5	100	99.335	Equus_asinus_asinus
ENSMLUG00000000468	SMARCA5	100	99.335	ENSECAG00000002676	SMARCA5	100	99.335	Equus_caballus
ENSMLUG00000000468	SMARCA5	94	95.368	ENSEEUG00000013176	SMARCA5	100	95.368	Erinaceus_europaeus
ENSMLUG00000000468	SMARCA5	92	89.278	ENSELUG00000014653	SMARCA5	99	89.278	Esox_lucius
ENSMLUG00000000468	SMARCA5	100	99.240	ENSFCAG00000004544	SMARCA5	100	99.240	Felis_catus
ENSMLUG00000000468	SMARCA5	92	97.526	ENSFALG00000004987	SMARCA5	100	97.526	Ficedula_albicollis
ENSMLUG00000000468	SMARCA5	99	96.073	ENSFDAG00000021016	SMARCA5	100	99.799	Fukomys_damarensis
ENSMLUG00000000468	SMARCA5	97	86.739	ENSGMOG00000007519	SMARCA5	94	89.355	Gadus_morhua
ENSMLUG00000000468	SMARCA5	95	97.791	ENSGALG00000009913	SMARCA5	96	97.598	Gallus_gallus
ENSMLUG00000000468	SMARCA5	93	90.686	ENSGACG00000017238	SMARCA5	95	90.686	Gasterosteus_aculeatus
ENSMLUG00000000468	SMARCA5	96	97.537	ENSGAGG00000019882	SMARCA5	96	98.298	Gopherus_agassizii
ENSMLUG00000000468	SMARCA5	100	98.764	ENSGGOG00000012595	SMARCA5	100	98.764	Gorilla_gorilla
ENSMLUG00000000468	SMARCA5	96	89.950	ENSHGLG00000000317	-	95	89.880	Heterocephalus_glaber_female
ENSMLUG00000000468	SMARCA5	100	98.099	ENSHGLG00000000816	-	99	98.099	Heterocephalus_glaber_female
ENSMLUG00000000468	SMARCA5	96	98.121	ENSHGLG00100018421	-	100	99.698	Heterocephalus_glaber_male
ENSMLUG00000000468	SMARCA5	100	99.240	ENSSTOG00000010683	SMARCA5	99	99.240	Ictidomys_tridecemlineatus
ENSMLUG00000000468	SMARCA5	100	98.479	ENSJJAG00000014965	Smarca5	100	98.479	Jaculus_jaculus
ENSMLUG00000000468	SMARCA5	94	95.661	ENSLACG00000007091	SMARCA5	97	95.661	Latimeria_chalumnae
ENSMLUG00000000468	SMARCA5	94	92.386	ENSLOCG00000008966	SMARCA5	96	92.386	Lepisosteus_oculatus
ENSMLUG00000000468	SMARCA5	100	98.669	ENSLAFG00000007795	SMARCA5	100	98.669	Loxodonta_africana
ENSMLUG00000000468	SMARCA5	100	98.859	ENSMFAG00000043649	SMARCA5	100	98.859	Macaca_fascicularis
ENSMLUG00000000468	SMARCA5	100	98.859	ENSMMUG00000000829	SMARCA5	100	98.859	Macaca_mulatta
ENSMLUG00000000468	SMARCA5	100	98.859	ENSMNEG00000031916	SMARCA5	100	98.859	Macaca_nemestrina
ENSMLUG00000000468	SMARCA5	100	98.859	ENSMLEG00000042393	SMARCA5	100	98.859	Mandrillus_leucophaeus
ENSMLUG00000000468	SMARCA5	95	97.300	ENSMGAG00000003517	SMARCA5	99	97.300	Meleagris_gallopavo
ENSMLUG00000000468	SMARCA5	94	99.799	ENSMAUG00000015902	Smarca5	98	99.799	Mesocricetus_auratus
ENSMLUG00000000468	SMARCA5	100	98.954	ENSMICG00000003971	SMARCA5	100	98.954	Microcebus_murinus
ENSMLUG00000000468	SMARCA5	99	98.099	ENSMOCG00000016986	-	99	98.099	Microtus_ochrogaster
ENSMLUG00000000468	SMARCA5	100	96.398	ENSMODG00000000391	SMARCA5	95	99.198	Monodelphis_domestica
ENSMLUG00000000468	SMARCA5	100	98.194	ENSMUSG00000031715	Smarca5	100	98.194	Mus_musculus
ENSMLUG00000000468	SMARCA5	100	98.384	MGP_PahariEiJ_G0022862	Smarca5	100	98.384	Mus_pahari
ENSMLUG00000000468	SMARCA5	100	98.289	ENSNGAG00000000441	Smarca5	100	98.289	Nannospalax_galili
ENSMLUG00000000468	SMARCA5	100	98.859	ENSNLEG00000005383	SMARCA5	100	98.859	Nomascus_leucogenys
ENSMLUG00000000468	SMARCA5	92	91.426	ENSMEUG00000001267	SMARCA5	100	91.426	Notamacropus_eugenii
ENSMLUG00000000468	SMARCA5	85	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSMLUG00000000468	SMARCA5	92	99.278	ENSOANG00000013921	SMARCA5	100	99.278	Ornithorhynchus_anatinus
ENSMLUG00000000468	SMARCA5	92	99.897	ENSOCUG00000013042	SMARCA5	100	99.897	Oryctolagus_cuniculus
ENSMLUG00000000468	SMARCA5	100	98.859	ENSOGAG00000009702	SMARCA5	100	98.859	Otolemur_garnettii
ENSMLUG00000000468	SMARCA5	99	98.858	ENSOARG00000010589	SMARCA5	99	98.858	Ovis_aries
ENSMLUG00000000468	SMARCA5	100	98.574	ENSPPAG00000028523	SMARCA5	100	98.574	Pan_paniscus
ENSMLUG00000000468	SMARCA5	98	93.476	ENSPPRG00000004925	SMARCA5	97	94.701	Panthera_pardus
ENSMLUG00000000468	SMARCA5	96	99.703	ENSPTIG00000020959	SMARCA5	97	99.703	Panthera_tigris_altaica
ENSMLUG00000000468	SMARCA5	100	98.669	ENSPTRG00000016472	SMARCA5	100	98.669	Pan_troglodytes
ENSMLUG00000000468	SMARCA5	100	98.859	ENSPANG00000001175	SMARCA5	100	98.859	Papio_anubis
ENSMLUG00000000468	SMARCA5	95	89.500	ENSPKIG00000015885	SMARCA5	100	91.340	Paramormyrops_kingsleyae
ENSMLUG00000000468	SMARCA5	93	90.881	ENSPKIG00000015699	SMARCA5	98	89.835	Paramormyrops_kingsleyae
ENSMLUG00000000468	SMARCA5	95	96.289	ENSPSIG00000004177	SMARCA5	100	96.289	Pelodiscus_sinensis
ENSMLUG00000000468	SMARCA5	92	90.021	ENSPMGG00000012316	SMARCA5	100	90.021	Periophthalmus_magnuspinnatus
ENSMLUG00000000468	SMARCA5	97	97.937	ENSPEMG00000008060	Smarca5	99	97.937	Peromyscus_maniculatus_bairdii
ENSMLUG00000000468	SMARCA5	96	69.578	ENSPMAG00000006011	SMARCA5	81	85.440	Petromyzon_marinus
ENSMLUG00000000468	SMARCA5	61	86.739	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSMLUG00000000468	SMARCA5	100	95.932	ENSPCIG00000003926	SMARCA5	95	99.198	Phascolarctos_cinereus
ENSMLUG00000000468	SMARCA5	100	98.954	ENSPPYG00000015091	SMARCA5	100	98.954	Pongo_abelii
ENSMLUG00000000468	SMARCA5	86	90.390	ENSPCAG00000014230	SMARCA5	88	90.783	Procavia_capensis
ENSMLUG00000000468	SMARCA5	100	96.198	ENSPCOG00000026744	SMARCA5	100	96.198	Propithecus_coquereli
ENSMLUG00000000468	SMARCA5	99	99.429	ENSPVAG00000006482	SMARCA5	100	99.429	Pteropus_vampyrus
ENSMLUG00000000468	SMARCA5	97	88.235	ENSPNAG00000027824	SMARCA5	97	90.456	Pygocentrus_nattereri
ENSMLUG00000000468	SMARCA5	95	99.598	ENSRNOG00000018149	Smarca5	100	99.598	Rattus_norvegicus
ENSMLUG00000000468	SMARCA5	100	98.670	ENSRBIG00000044644	SMARCA5	100	98.670	Rhinopithecus_bieti
ENSMLUG00000000468	SMARCA5	98	98.548	ENSRROG00000029591	SMARCA5	99	99.598	Rhinopithecus_roxellana
ENSMLUG00000000468	SMARCA5	100	98.859	ENSSBOG00000036257	SMARCA5	100	98.859	Saimiri_boliviensis_boliviensis
ENSMLUG00000000468	SMARCA5	94	99.295	ENSSHAG00000008464	SMARCA5	100	99.295	Sarcophilus_harrisii
ENSMLUG00000000468	SMARCA5	94	90.352	ENSSFOG00015013252	SMARCA5	97	90.352	Scleropages_formosus
ENSMLUG00000000468	SMARCA5	97	95.088	ENSSPUG00000007604	SMARCA5	99	96.583	Sphenodon_punctatus
ENSMLUG00000000468	SMARCA5	100	99.049	ENSSSCG00000009047	SMARCA5	100	99.049	Sus_scrofa
ENSMLUG00000000468	SMARCA5	96	96.329	ENSTGUG00000002408	SMARCA5	100	96.329	Taeniopygia_guttata
ENSMLUG00000000468	SMARCA5	98	99.128	ENSUAMG00000023495	SMARCA5	99	99.128	Ursus_americanus
ENSMLUG00000000468	SMARCA5	95	99.701	ENSUMAG00000015324	SMARCA5	97	99.701	Ursus_maritimus
ENSMLUG00000000468	SMARCA5	100	99.144	ENSVPAG00000008982	SMARCA5	100	99.144	Vicugna_pacos
ENSMLUG00000000468	SMARCA5	100	99.144	ENSVVUG00000017473	SMARCA5	100	99.144	Vulpes_vulpes
ENSMLUG00000000468	SMARCA5	94	89.839	ENSXETG00000017566	smarca5	95	93.347	Xenopus_tropicalis