EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000000767 (Gene tree)
Gene ID: 102425772
Gene Symbol: PRDM4
Alias: PFM1
Full Name: PR/SET domain 4
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 16034 bases
Position: chrGL429870:2372282-2388315
Accession: 102425772
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000000704	zf-C2H2	PF00096.26	1.8e-20	1	3
ENSMLUP00000000704	zf-C2H2	PF00096.26	1.8e-20	2	3
ENSMLUP00000000704	zf-C2H2	PF00096.26	1.8e-20	3	3
ENSMLUP00000000704	zf-met	PF12874.7	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000000771	PRDM4-201	2406	XM_006092720	ENSMLUP00000000704	801 (aa)	XP_006092782	G1NU26

Gene Model

Click here to download ENSMLUG00000000767's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000000767's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000000767	PRDM4	99	97.118	ENSG00000110851	PRDM4	99	97.118	Homo_sapiens
ENSMLUG00000000767	PRDM4	100	97.382	ENSAMEG00000016174	PRDM4	100	97.382	Ailuropoda_melanoleuca
ENSMLUG00000000767	PRDM4	99	87.218	ENSAPLG00000009846	PRDM4	99	86.717	Anas_platyrhynchos
ENSMLUG00000000767	PRDM4	99	96.992	ENSANAG00000024800	PRDM4	99	96.992	Aotus_nancymaae
ENSMLUG00000000767	PRDM4	99	96.992	ENSBTAG00000012999	PRDM4	99	96.992	Bos_taurus
ENSMLUG00000000767	PRDM4	99	96.491	ENSCJAG00000015261	PRDM4	99	96.491	Callithrix_jacchus
ENSMLUG00000000767	PRDM4	100	96.879	ENSCAFG00000001788	PRDM4	100	96.879	Canis_familiaris
ENSMLUG00000000767	PRDM4	99	97.494	ENSCAFG00020004916	PRDM4	99	97.494	Canis_lupus_dingo
ENSMLUG00000000767	PRDM4	99	96.867	ENSCHIG00000019409	PRDM4	99	96.867	Capra_hircus
ENSMLUG00000000767	PRDM4	99	96.992	ENSTSYG00000009248	PRDM4	99	96.992	Carlito_syrichta
ENSMLUG00000000767	PRDM4	99	90.613	ENSCAPG00000013937	PRDM4	99	90.613	Cavia_aperea
ENSMLUG00000000767	PRDM4	99	90.062	ENSCPOG00000022385	PRDM4	100	90.062	Cavia_porcellus
ENSMLUG00000000767	PRDM4	99	97.118	ENSCCAG00000036033	PRDM4	99	97.118	Cebus_capucinus
ENSMLUG00000000767	PRDM4	99	96.742	ENSCATG00000044797	PRDM4	99	96.742	Cercocebus_atys
ENSMLUG00000000767	PRDM4	99	92.413	ENSCLAG00000007545	PRDM4	100	92.910	Chinchilla_lanigera
ENSMLUG00000000767	PRDM4	99	96.992	ENSCSAG00000002896	PRDM4	99	96.992	Chlorocebus_sabaeus
ENSMLUG00000000767	PRDM4	75	97.196	ENSCHOG00000001744	PRDM4	85	97.196	Choloepus_hoffmanni
ENSMLUG00000000767	PRDM4	99	88.080	ENSCPBG00000023187	PRDM4	100	87.578	Chrysemys_picta_bellii
ENSMLUG00000000767	PRDM4	99	96.867	ENSCANG00000021804	PRDM4	99	96.867	Colobus_angolensis_palliatus
ENSMLUG00000000767	PRDM4	99	92.910	ENSCGRG00001015102	-	100	92.662	Cricetulus_griseus_chok1gshd
ENSMLUG00000000767	PRDM4	96	92.903	ENSCGRG00000004044	-	100	92.645	Cricetulus_griseus_crigri
ENSMLUG00000000767	PRDM4	99	95.990	ENSDNOG00000032478	PRDM4	99	96.403	Dasypus_novemcinctus
ENSMLUG00000000767	PRDM4	99	81.556	ENSDORG00000015081	-	100	81.681	Dipodomys_ordii
ENSMLUG00000000767	PRDM4	93	45.518	ENSEBUG00000003775	prdm4	99	45.845	Eptatretus_burgeri
ENSMLUG00000000767	PRDM4	99	97.494	ENSECAG00000015423	PRDM4	100	97.264	Equus_caballus
ENSMLUG00000000767	PRDM4	94	93.076	ENSEEUG00000006569	PRDM4	99	92.810	Erinaceus_europaeus
ENSMLUG00000000767	PRDM4	99	60.875	ENSELUG00000015265	prdm4	93	62.987	Esox_lucius
ENSMLUG00000000767	PRDM4	99	97.870	ENSFCAG00000022478	PRDM4	99	97.870	Felis_catus
ENSMLUG00000000767	PRDM4	99	87.202	ENSFALG00000013342	PRDM4	100	86.826	Ficedula_albicollis
ENSMLUG00000000767	PRDM4	100	86.800	ENSGALG00000012619	PRDM4	100	86.301	Gallus_gallus
ENSMLUG00000000767	PRDM4	100	87.516	ENSGAGG00000002763	PRDM4	95	87.016	Gopherus_agassizii
ENSMLUG00000000767	PRDM4	99	96.992	ENSGGOG00000001244	PRDM4	99	96.992	Gorilla_gorilla
ENSMLUG00000000767	PRDM4	99	93.601	ENSHGLG00000004590	PRDM4	98	93.225	Heterocephalus_glaber_female
ENSMLUG00000000767	PRDM4	99	92.547	ENSHGLG00100007464	PRDM4	100	92.174	Heterocephalus_glaber_male
ENSMLUG00000000767	PRDM4	95	61.010	ENSIPUG00000024162	prdm4	93	61.358	Ictalurus_punctatus
ENSMLUG00000000767	PRDM4	100	96.629	ENSSTOG00000016168	PRDM4	100	96.629	Ictidomys_tridecemlineatus
ENSMLUG00000000767	PRDM4	81	94.054	ENSJJAG00000022448	-	95	94.054	Jaculus_jaculus
ENSMLUG00000000767	PRDM4	99	72.277	ENSLACG00000007452	PRDM4	99	73.020	Latimeria_chalumnae
ENSMLUG00000000767	PRDM4	75	41.425	ENSLOCG00000017092	prdm4	100	52.381	Lepisosteus_oculatus
ENSMLUG00000000767	PRDM4	98	96.954	ENSLAFG00000001483	PRDM4	100	96.954	Loxodonta_africana
ENSMLUG00000000767	PRDM4	99	97.118	ENSMFAG00000041862	PRDM4	99	97.118	Macaca_fascicularis
ENSMLUG00000000767	PRDM4	100	96.879	ENSMMUG00000015550	PRDM4	99	97.118	Macaca_mulatta
ENSMLUG00000000767	PRDM4	99	96.867	ENSMNEG00000032319	PRDM4	99	96.867	Macaca_nemestrina
ENSMLUG00000000767	PRDM4	99	96.992	ENSMLEG00000039607	PRDM4	99	96.992	Mandrillus_leucophaeus
ENSMLUG00000000767	PRDM4	99	79.625	ENSMGAG00000012815	PRDM4	100	79.125	Meleagris_gallopavo
ENSMLUG00000000767	PRDM4	99	96.491	ENSMICG00000007807	PRDM4	99	96.491	Microcebus_murinus
ENSMLUG00000000767	PRDM4	100	94.007	ENSMOCG00000000753	Prdm4	99	93.758	Microtus_ochrogaster
ENSMLUG00000000767	PRDM4	99	93.852	ENSMUSG00000035529	Prdm4	100	93.601	Mus_musculus
ENSMLUG00000000767	PRDM4	99	93.726	MGP_PahariEiJ_G0031398	Prdm4	100	93.774	Mus_pahari
ENSMLUG00000000767	PRDM4	99	94.605	MGP_SPRETEiJ_G0016505	Prdm4	100	94.663	Mus_spretus
ENSMLUG00000000767	PRDM4	100	91.429	ENSMPUG00000012238	PRDM4	100	91.429	Mustela_putorius_furo
ENSMLUG00000000767	PRDM4	99	95.609	ENSNGAG00000018627	Prdm4	100	95.609	Nannospalax_galili
ENSMLUG00000000767	PRDM4	99	96.992	ENSNLEG00000006748	PRDM4	99	96.992	Nomascus_leucogenys
ENSMLUG00000000767	PRDM4	89	88.732	ENSMEUG00000004495	PRDM4	89	88.732	Notamacropus_eugenii
ENSMLUG00000000767	PRDM4	88	94.609	ENSOPRG00000010192	PRDM4	89	94.609	Ochotona_princeps
ENSMLUG00000000767	PRDM4	99	90.590	ENSODEG00000014750	PRDM4	99	90.464	Octodon_degus
ENSMLUG00000000767	PRDM4	99	90.476	ENSOANG00000005526	PRDM4	99	90.476	Ornithorhynchus_anatinus
ENSMLUG00000000767	PRDM4	93	96.710	ENSOCUG00000012859	PRDM4	96	96.710	Oryctolagus_cuniculus
ENSMLUG00000000767	PRDM4	99	97.114	ENSOGAG00000011945	PRDM4	100	97.114	Otolemur_garnettii
ENSMLUG00000000767	PRDM4	99	96.617	ENSOARG00000017955	PRDM4	99	96.617	Ovis_aries
ENSMLUG00000000767	PRDM4	99	97.118	ENSPPAG00000038438	PRDM4	99	97.118	Pan_paniscus
ENSMLUG00000000767	PRDM4	99	97.870	ENSPPRG00000004144	PRDM4	99	97.870	Panthera_pardus
ENSMLUG00000000767	PRDM4	99	97.870	ENSPTIG00000005847	PRDM4	99	97.870	Panthera_tigris_altaica
ENSMLUG00000000767	PRDM4	99	97.118	ENSPTRG00000005400	PRDM4	99	97.118	Pan_troglodytes
ENSMLUG00000000767	PRDM4	99	97.118	ENSPANG00000022084	PRDM4	99	97.118	Papio_anubis
ENSMLUG00000000767	PRDM4	99	60.476	ENSPKIG00000000875	prdm4	99	60.833	Paramormyrops_kingsleyae
ENSMLUG00000000767	PRDM4	91	80.989	ENSPSIG00000012066	PRDM4	100	80.989	Pelodiscus_sinensis
ENSMLUG00000000767	PRDM4	99	95.358	ENSPEMG00000014598	Prdm4	100	95.358	Peromyscus_maniculatus_bairdii
ENSMLUG00000000767	PRDM4	99	88.764	ENSPCIG00000009471	PRDM4	99	88.764	Phascolarctos_cinereus
ENSMLUG00000000767	PRDM4	99	96.992	ENSPPYG00000004913	PRDM4	99	96.992	Pongo_abelii
ENSMLUG00000000767	PRDM4	83	97.778	ENSPCAG00000009987	PRDM4	83	97.778	Procavia_capensis
ENSMLUG00000000767	PRDM4	99	96.617	ENSPCOG00000021060	PRDM4	99	96.617	Propithecus_coquereli
ENSMLUG00000000767	PRDM4	99	96.871	ENSPVAG00000001596	PRDM4	99	96.871	Pteropus_vampyrus
ENSMLUG00000000767	PRDM4	99	93.734	ENSRNOG00000004962	Prdm4	100	93.358	Rattus_norvegicus
ENSMLUG00000000767	PRDM4	99	96.867	ENSRBIG00000035488	PRDM4	99	96.867	Rhinopithecus_bieti
ENSMLUG00000000767	PRDM4	99	96.992	ENSRROG00000012779	PRDM4	99	96.992	Rhinopithecus_roxellana
ENSMLUG00000000767	PRDM4	99	96.992	ENSSBOG00000000403	PRDM4	99	96.992	Saimiri_boliviensis_boliviensis
ENSMLUG00000000767	PRDM4	99	63.547	ENSSFOG00015023358	prdm4	99	63.547	Scleropages_formosus
ENSMLUG00000000767	PRDM4	99	97.118	ENSSSCG00000000160	PRDM4	99	97.118	Sus_scrofa
ENSMLUG00000000767	PRDM4	100	87.141	ENSTGUG00000010962	-	100	86.767	Taeniopygia_guttata
ENSMLUG00000000767	PRDM4	73	89.761	ENSTBEG00000001732	PRDM4	84	89.761	Tupaia_belangeri
ENSMLUG00000000767	PRDM4	99	96.742	ENSTTRG00000011056	PRDM4	99	96.742	Tursiops_truncatus
ENSMLUG00000000767	PRDM4	99	97.744	ENSUAMG00000022796	PRDM4	99	97.744	Ursus_americanus
ENSMLUG00000000767	PRDM4	99	97.744	ENSUMAG00000017231	PRDM4	99	97.744	Ursus_maritimus
ENSMLUG00000000767	PRDM4	99	97.616	ENSVPAG00000002215	PRDM4	100	97.616	Vicugna_pacos
ENSMLUG00000000767	PRDM4	99	97.494	ENSVVUG00000023397	PRDM4	99	97.494	Vulpes_vulpes