EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000000840 (Gene tree)
Gene ID: 102428941
Gene Symbol: SF3B1
Alias: Hsh155|PRPF10|Prp10|SAP155|SF3b155
Full Name: splicing factor 3b subunit 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 30913 bases
Position: chrGL429770:3772470-3803382
Accession: 102428941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000000782	SF3b1	PF08920.10	3e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000000855	SF3B1-201	3915	XM_006109852	ENSMLUP00000000782	1304 (aa)	XP_006109914	G1NU96

Gene Model

Click here to download ENSMLUG00000000840's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000000840's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000000840	SF3B1	100	98.773	ENSG00000115524	SF3B1	100	100.000	Homo_sapiens
ENSMLUG00000000840	SF3B1	100	92.483	ENSAPOG00000011894	sf3b1	100	92.483	Acanthochromis_polyacanthus
ENSMLUG00000000840	SF3B1	99	98.688	ENSAMEG00000013809	SF3B1	99	98.688	Ailuropoda_melanoleuca
ENSMLUG00000000840	SF3B1	100	92.073	ENSACIG00000020910	sf3b1	97	91.921	Amphilophus_citrinellus
ENSMLUG00000000840	SF3B1	100	92.483	ENSAOCG00000004478	sf3b1	100	92.483	Amphiprion_ocellaris
ENSMLUG00000000840	SF3B1	100	92.483	ENSAPEG00000012937	sf3b1	100	92.483	Amphiprion_percula
ENSMLUG00000000840	SF3B1	100	92.553	ENSATEG00000020435	sf3b1	100	92.553	Anabas_testudineus
ENSMLUG00000000840	SF3B1	99	98.147	ENSAPLG00000003993	SF3B1	99	98.147	Anas_platyrhynchos
ENSMLUG00000000840	SF3B1	100	97.623	ENSACAG00000009612	SF3B1	100	97.623	Anolis_carolinensis
ENSMLUG00000000840	SF3B1	100	98.773	ENSANAG00000021577	SF3B1	100	98.773	Aotus_nancymaae
ENSMLUG00000000840	SF3B1	100	91.717	ENSACLG00000023470	sf3b1	100	91.565	Astatotilapia_calliptera
ENSMLUG00000000840	SF3B1	100	93.009	ENSAMXG00000002219	sf3b1	100	92.857	Astyanax_mexicanus
ENSMLUG00000000840	SF3B1	100	98.696	ENSBTAG00000008915	SF3B1	100	98.696	Bos_taurus
ENSMLUG00000000840	SF3B1	98	65.535	WBGene00011605	sftb-1	98	65.611	Caenorhabditis_elegans
ENSMLUG00000000840	SF3B1	100	98.773	ENSCJAG00000003902	SF3B1	100	98.773	Callithrix_jacchus
ENSMLUG00000000840	SF3B1	100	98.773	ENSCAFG00000010826	SF3B1	100	98.773	Canis_familiaris
ENSMLUG00000000840	SF3B1	100	98.773	ENSCAFG00020004750	SF3B1	100	98.773	Canis_lupus_dingo
ENSMLUG00000000840	SF3B1	100	98.696	ENSCHIG00000015226	SF3B1	100	98.696	Capra_hircus
ENSMLUG00000000840	SF3B1	100	98.696	ENSTSYG00000009214	SF3B1	100	98.696	Carlito_syrichta
ENSMLUG00000000840	SF3B1	99	98.615	ENSCAPG00000006547	SF3B1	99	98.615	Cavia_aperea
ENSMLUG00000000840	SF3B1	99	98.764	ENSCPOG00000009353	SF3B1	100	98.764	Cavia_porcellus
ENSMLUG00000000840	SF3B1	100	98.773	ENSCCAG00000020506	SF3B1	100	98.773	Cebus_capucinus
ENSMLUG00000000840	SF3B1	100	98.773	ENSCATG00000035735	SF3B1	100	98.773	Cercocebus_atys
ENSMLUG00000000840	SF3B1	99	98.764	ENSCLAG00000014767	SF3B1	99	98.764	Chinchilla_lanigera
ENSMLUG00000000840	SF3B1	100	98.773	ENSCSAG00000011505	SF3B1	100	98.773	Chlorocebus_sabaeus
ENSMLUG00000000840	SF3B1	76	98.462	ENSCHOG00000009860	SF3B1	76	98.438	Choloepus_hoffmanni
ENSMLUG00000000840	SF3B1	100	98.006	ENSCPBG00000021902	SF3B1	100	98.006	Chrysemys_picta_bellii
ENSMLUG00000000840	SF3B1	68	78.060	ENSCING00000002558	-	99	78.771	Ciona_intestinalis
ENSMLUG00000000840	SF3B1	99	78.728	ENSCSAVG00000002559	-	99	78.333	Ciona_savignyi
ENSMLUG00000000840	SF3B1	100	98.773	ENSCANG00000029415	SF3B1	100	98.773	Colobus_angolensis_palliatus
ENSMLUG00000000840	SF3B1	100	98.773	ENSCGRG00001016990	Sf3b1	100	98.773	Cricetulus_griseus_chok1gshd
ENSMLUG00000000840	SF3B1	100	98.773	ENSCGRG00000005301	Sf3b1	100	98.773	Cricetulus_griseus_crigri
ENSMLUG00000000840	SF3B1	100	88.948	ENSCSEG00000003860	sf3b1	100	88.796	Cynoglossus_semilaevis
ENSMLUG00000000840	SF3B1	96	92.490	ENSCVAG00000003680	sf3b1	99	92.490	Cyprinodon_variegatus
ENSMLUG00000000840	SF3B1	100	92.331	ENSDARG00000056138	sf3b1	100	92.255	Danio_rerio
ENSMLUG00000000840	SF3B1	100	98.697	ENSDNOG00000011754	SF3B1	100	98.697	Dasypus_novemcinctus
ENSMLUG00000000840	SF3B1	99	96.062	ENSDORG00000002399	Sf3b1	100	96.062	Dipodomys_ordii
ENSMLUG00000000840	SF3B1	100	75.588	FBgn0031266	Sf3b1	100	75.588	Drosophila_melanogaster
ENSMLUG00000000840	SF3B1	83	97.866	ENSETEG00000009188	SF3B1	100	97.866	Echinops_telfairi
ENSMLUG00000000840	SF3B1	99	86.120	ENSEBUG00000004325	sf3b1	100	88.889	Eptatretus_burgeri
ENSMLUG00000000840	SF3B1	100	98.696	ENSEASG00005020159	SF3B1	98	98.696	Equus_asinus_asinus
ENSMLUG00000000840	SF3B1	100	98.696	ENSECAG00000021657	SF3B1	98	98.696	Equus_caballus
ENSMLUG00000000840	SF3B1	87	100.000	ENSEEUG00000000836	SF3B1	81	100.000	Erinaceus_europaeus
ENSMLUG00000000840	SF3B1	100	92.000	ENSELUG00000005977	sf3b1	98	91.849	Esox_lucius
ENSMLUG00000000840	SF3B1	100	98.773	ENSFCAG00000005038	SF3B1	100	98.773	Felis_catus
ENSMLUG00000000840	SF3B1	99	98.224	ENSFALG00000004281	SF3B1	99	98.224	Ficedula_albicollis
ENSMLUG00000000840	SF3B1	100	98.773	ENSFDAG00000017510	SF3B1	100	98.773	Fukomys_damarensis
ENSMLUG00000000840	SF3B1	100	91.800	ENSFHEG00000014333	sf3b1	100	91.800	Fundulus_heteroclitus
ENSMLUG00000000840	SF3B1	100	92.390	ENSGMOG00000006773	sf3b1	100	92.390	Gadus_morhua
ENSMLUG00000000840	SF3B1	100	98.160	ENSGALG00000008038	SF3B1	100	98.160	Gallus_gallus
ENSMLUG00000000840	SF3B1	100	90.770	ENSGAFG00000000704	sf3b1	99	92.284	Gambusia_affinis
ENSMLUG00000000840	SF3B1	100	92.530	ENSGACG00000008839	sf3b1	100	92.530	Gasterosteus_aculeatus
ENSMLUG00000000840	SF3B1	100	97.334	ENSGAGG00000017478	SF3B1	100	97.334	Gopherus_agassizii
ENSMLUG00000000840	SF3B1	99	91.942	ENSGGOG00000009264	SF3B1	99	93.000	Gorilla_gorilla
ENSMLUG00000000840	SF3B1	99	91.781	ENSHBUG00000007705	sf3b1	99	91.629	Haplochromis_burtoni
ENSMLUG00000000840	SF3B1	99	98.764	ENSHGLG00000008285	-	99	98.764	Heterocephalus_glaber_female
ENSMLUG00000000840	SF3B1	99	96.757	ENSHGLG00100005535	-	99	96.757	Heterocephalus_glaber_male
ENSMLUG00000000840	SF3B1	100	91.843	ENSHCOG00000016775	sf3b1	100	91.692	Hippocampus_comes
ENSMLUG00000000840	SF3B1	100	92.857	ENSIPUG00000013171	sf3b1	100	92.857	Ictalurus_punctatus
ENSMLUG00000000840	SF3B1	100	98.773	ENSSTOG00000011034	SF3B1	100	98.773	Ictidomys_tridecemlineatus
ENSMLUG00000000840	SF3B1	99	98.682	ENSJJAG00000010903	Sf3b1	99	98.682	Jaculus_jaculus
ENSMLUG00000000840	SF3B1	100	91.970	ENSKMAG00000004009	sf3b1	100	91.894	Kryptolebias_marmoratus
ENSMLUG00000000840	SF3B1	100	92.443	ENSLBEG00000022208	sf3b1	100	92.290	Labrus_bergylta
ENSMLUG00000000840	SF3B1	99	91.341	ENSLACG00000014832	SF3B1	99	91.341	Latimeria_chalumnae
ENSMLUG00000000840	SF3B1	100	93.778	ENSLOCG00000003899	sf3b1	100	93.627	Lepisosteus_oculatus
ENSMLUG00000000840	SF3B1	100	98.773	ENSLAFG00000001956	SF3B1	100	98.773	Loxodonta_africana
ENSMLUG00000000840	SF3B1	99	98.764	ENSMMUG00000022430	SF3B1	99	98.764	Macaca_mulatta
ENSMLUG00000000840	SF3B1	100	98.773	ENSMNEG00000042333	SF3B1	100	98.773	Macaca_nemestrina
ENSMLUG00000000840	SF3B1	95	92.190	ENSMLEG00000026141	SF3B1	98	92.677	Mandrillus_leucophaeus
ENSMLUG00000000840	SF3B1	100	92.477	ENSMAMG00000010241	sf3b1	100	92.477	Mastacembelus_armatus
ENSMLUG00000000840	SF3B1	100	91.717	ENSMZEG00005021254	sf3b1	100	91.565	Maylandia_zebra
ENSMLUG00000000840	SF3B1	99	97.529	ENSMGAG00000007017	SF3B1	99	97.529	Meleagris_gallopavo
ENSMLUG00000000840	SF3B1	99	94.517	ENSMAUG00000009071	Sf3b1	99	94.517	Mesocricetus_auratus
ENSMLUG00000000840	SF3B1	100	98.696	ENSMICG00000013879	SF3B1	100	98.696	Microcebus_murinus
ENSMLUG00000000840	SF3B1	99	94.290	ENSMOCG00000000455	Sf3b1	99	94.290	Microtus_ochrogaster
ENSMLUG00000000840	SF3B1	84	91.689	ENSMMOG00000000475	sf3b1	100	91.689	Mola_mola
ENSMLUG00000000840	SF3B1	100	98.083	ENSMODG00000012275	SF3B1	100	98.083	Monodelphis_domestica
ENSMLUG00000000840	SF3B1	100	92.401	ENSMALG00000017211	sf3b1	100	92.401	Monopterus_albus
ENSMLUG00000000840	SF3B1	100	98.773	MGP_CAROLIEiJ_G0014141	Sf3b1	100	98.773	Mus_caroli
ENSMLUG00000000840	SF3B1	100	98.773	ENSMUSG00000025982	Sf3b1	100	98.773	Mus_musculus
ENSMLUG00000000840	SF3B1	100	98.773	MGP_SPRETEiJ_G0014947	Sf3b1	100	98.773	Mus_spretus
ENSMLUG00000000840	SF3B1	100	98.773	ENSMPUG00000007799	SF3B1	100	98.773	Mustela_putorius_furo
ENSMLUG00000000840	SF3B1	99	98.462	ENSNGAG00000021884	-	100	98.462	Nannospalax_galili
ENSMLUG00000000840	SF3B1	100	87.966	ENSNBRG00000015816	sf3b1	100	87.966	Neolamprologus_brichardi
ENSMLUG00000000840	SF3B1	100	98.773	ENSNLEG00000006861	SF3B1	100	98.773	Nomascus_leucogenys
ENSMLUG00000000840	SF3B1	69	100.000	ENSMEUG00000015848	-	66	100.000	Notamacropus_eugenii
ENSMLUG00000000840	SF3B1	100	86.887	ENSOPRG00000008596	SF3B1	100	86.887	Ochotona_princeps
ENSMLUG00000000840	SF3B1	100	98.773	ENSODEG00000011153	-	100	98.773	Octodon_degus
ENSMLUG00000000840	SF3B1	100	91.717	ENSONIG00000013758	sf3b1	100	91.565	Oreochromis_niloticus
ENSMLUG00000000840	SF3B1	83	97.601	ENSOCUG00000012722	-	96	97.601	Oryctolagus_cuniculus
ENSMLUG00000000840	SF3B1	100	92.249	ENSORLG00000020219	sf3b1	100	92.249	Oryzias_latipes
ENSMLUG00000000840	SF3B1	100	92.249	ENSORLG00020001746	sf3b1	100	92.249	Oryzias_latipes_hni
ENSMLUG00000000840	SF3B1	64	90.952	ENSORLG00015001759	sf3b1	98	90.952	Oryzias_latipes_hsok
ENSMLUG00000000840	SF3B1	100	92.255	ENSOMEG00000019231	sf3b1	100	92.255	Oryzias_melastigma
ENSMLUG00000000840	SF3B1	100	98.696	ENSOARG00000015374	SF3B1	100	98.696	Ovis_aries
ENSMLUG00000000840	SF3B1	100	98.773	ENSPPAG00000035007	SF3B1	100	98.773	Pan_paniscus
ENSMLUG00000000840	SF3B1	100	98.773	ENSPPRG00000009090	SF3B1	100	98.773	Panthera_pardus
ENSMLUG00000000840	SF3B1	100	98.773	ENSPTIG00000021557	SF3B1	100	98.773	Panthera_tigris_altaica
ENSMLUG00000000840	SF3B1	99	90.223	ENSPTRG00000012771	SF3B1	99	90.223	Pan_troglodytes
ENSMLUG00000000840	SF3B1	100	98.773	ENSPANG00000013417	SF3B1	100	98.773	Papio_anubis
ENSMLUG00000000840	SF3B1	100	93.912	ENSPKIG00000000784	sf3b1	100	93.760	Paramormyrops_kingsleyae
ENSMLUG00000000840	SF3B1	99	96.754	ENSPSIG00000017222	SF3B1	98	96.754	Pelodiscus_sinensis
ENSMLUG00000000840	SF3B1	90	92.755	ENSPMGG00000004330	sf3b1	99	92.586	Periophthalmus_magnuspinnatus
ENSMLUG00000000840	SF3B1	99	98.764	ENSPEMG00000010699	Sf3b1	100	98.764	Peromyscus_maniculatus_bairdii
ENSMLUG00000000840	SF3B1	100	88.914	ENSPMAG00000001311	sf3b1	100	89.066	Petromyzon_marinus
ENSMLUG00000000840	SF3B1	100	98.006	ENSPCIG00000010642	SF3B1	100	98.006	Phascolarctos_cinereus
ENSMLUG00000000840	SF3B1	100	92.185	ENSPFOG00000000073	sf3b1	100	92.185	Poecilia_formosa
ENSMLUG00000000840	SF3B1	100	92.255	ENSPLAG00000002293	sf3b1	100	92.255	Poecilia_latipinna
ENSMLUG00000000840	SF3B1	100	92.255	ENSPMEG00000000446	sf3b1	98	92.255	Poecilia_mexicana
ENSMLUG00000000840	SF3B1	100	92.331	ENSPREG00000019652	sf3b1	100	92.331	Poecilia_reticulata
ENSMLUG00000000840	SF3B1	100	97.445	ENSPPYG00000013044	SF3B1	96	97.445	Pongo_abelii
ENSMLUG00000000840	SF3B1	100	98.620	ENSPCAG00000009292	SF3B1	100	98.620	Procavia_capensis
ENSMLUG00000000840	SF3B1	100	98.696	ENSPCOG00000024074	SF3B1	100	98.696	Propithecus_coquereli
ENSMLUG00000000840	SF3B1	100	98.773	ENSPVAG00000008302	SF3B1	100	98.773	Pteropus_vampyrus
ENSMLUG00000000840	SF3B1	100	91.641	ENSPNYG00000014939	sf3b1	100	91.489	Pundamilia_nyererei
ENSMLUG00000000840	SF3B1	100	92.857	ENSPNAG00000008288	sf3b1	100	92.857	Pygocentrus_nattereri
ENSMLUG00000000840	SF3B1	100	98.773	ENSRNOG00000013516	Sf3b1	100	98.773	Rattus_norvegicus
ENSMLUG00000000840	SF3B1	99	95.008	ENSRBIG00000026096	SF3B1	100	95.008	Rhinopithecus_bieti
ENSMLUG00000000840	SF3B1	100	98.773	ENSRROG00000031308	SF3B1	100	98.773	Rhinopithecus_roxellana
ENSMLUG00000000840	SF3B1	100	98.773	ENSSBOG00000020080	SF3B1	100	98.773	Saimiri_boliviensis_boliviensis
ENSMLUG00000000840	SF3B1	100	98.083	ENSSHAG00000017564	SF3B1	100	98.083	Sarcophilus_harrisii
ENSMLUG00000000840	SF3B1	100	93.470	ENSSFOG00015021535	sf3b1	100	93.622	Scleropages_formosus
ENSMLUG00000000840	SF3B1	99	91.818	ENSSMAG00000013977	sf3b1	99	91.667	Scophthalmus_maximus
ENSMLUG00000000840	SF3B1	100	92.249	ENSSDUG00000017422	sf3b1	100	92.249	Seriola_dumerili
ENSMLUG00000000840	SF3B1	100	92.173	ENSSLDG00000019495	sf3b1	100	92.173	Seriola_lalandi_dorsalis
ENSMLUG00000000840	SF3B1	76	99.363	ENSSARG00000007016	SF3B1	76	99.363	Sorex_araneus
ENSMLUG00000000840	SF3B1	100	97.853	ENSSPUG00000000410	SF3B1	100	97.853	Sphenodon_punctatus
ENSMLUG00000000840	SF3B1	100	92.553	ENSSPAG00000010451	sf3b1	99	92.553	Stegastes_partitus
ENSMLUG00000000840	SF3B1	91	98.234	ENSSSCG00000016075	SF3B1	100	98.618	Sus_scrofa
ENSMLUG00000000840	SF3B1	100	98.083	ENSTGUG00000010553	SF3B1	100	98.083	Taeniopygia_guttata
ENSMLUG00000000840	SF3B1	100	92.249	ENSTRUG00000015534	sf3b1	100	92.097	Takifugu_rubripes
ENSMLUG00000000840	SF3B1	88	100.000	ENSTBEG00000008714	SF3B1	93	100.000	Tupaia_belangeri
ENSMLUG00000000840	SF3B1	92	92.288	ENSTTRG00000003414	SF3B1	92	92.288	Tursiops_truncatus
ENSMLUG00000000840	SF3B1	94	95.522	ENSUAMG00000018506	SF3B1	99	96.154	Ursus_americanus
ENSMLUG00000000840	SF3B1	100	98.773	ENSUMAG00000020945	SF3B1	100	98.773	Ursus_maritimus
ENSMLUG00000000840	SF3B1	100	90.644	ENSVPAG00000005798	SF3B1	100	90.644	Vicugna_pacos
ENSMLUG00000000840	SF3B1	100	98.773	ENSVVUG00000025948	SF3B1	95	98.773	Vulpes_vulpes
ENSMLUG00000000840	SF3B1	100	95.402	ENSXETG00000013339	sf3b1	100	95.402	Xenopus_tropicalis
ENSMLUG00000000840	SF3B1	100	88.761	ENSXCOG00000018086	sf3b1	100	88.652	Xiphophorus_couchianus
ENSMLUG00000000840	SF3B1	100	92.255	ENSXMAG00000007369	sf3b1	100	92.538	Xiphophorus_maculatus