EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000000889 (Gene tree)
Gene ID: 102441920
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 33265 bases
Position: chrGL429815:4458661-4491925
Accession: 30358
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000000807	RRM_5	PF13893.6	1.3e-06	1	1
ENSMLUP00000000807	RRM_1	PF00076.22	1.3e-38	1	3
ENSMLUP00000000807	RRM_1	PF00076.22	1.3e-38	2	3
ENSMLUP00000000807	RRM_1	PF00076.22	1.3e-38	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000000882	RBM47-201	1845	XM_006088485	ENSMLUP00000000807	590 (aa)	XP_006088547	G1NUB5

Gene Model

Click here to download ENSMLUG00000000889's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000000889's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000000889	RBM47	52	56.129	ENSMLUG00000007582	HNRNPR	71	45.055
ENSMLUG00000000889	RBM47	51	73.090	ENSMLUG00000003221	RBM46	56	73.090
ENSMLUG00000000889	RBM47	51	55.814	ENSMLUG00000006919	SYNCRIP	69	47.126
ENSMLUG00000000889	RBM47	72	58.652	ENSMLUG00000016071	A1CF	74	58.652

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000000889	RBM47	100	92.114	ENSG00000163694	RBM47	100	94.470	Homo_sapiens
ENSMLUG00000000889	RBM47	100	78.000	ENSAPOG00000011062	rbm47	100	80.916	Acanthochromis_polyacanthus
ENSMLUG00000000889	RBM47	100	92.630	ENSAMEG00000009672	RBM47	100	93.132	Ailuropoda_melanoleuca
ENSMLUG00000000889	RBM47	100	76.589	ENSACIG00000011531	rbm47	100	76.589	Amphilophus_citrinellus
ENSMLUG00000000889	RBM47	100	79.264	ENSAOCG00000022245	rbm47	100	80.916	Amphiprion_ocellaris
ENSMLUG00000000889	RBM47	100	79.062	ENSAPEG00000018304	rbm47	100	80.916	Amphiprion_percula
ENSMLUG00000000889	RBM47	100	76.885	ENSATEG00000018400	rbm47	100	75.902	Anabas_testudineus
ENSMLUG00000000889	RBM47	100	87.184	ENSAPLG00000013974	RBM47	100	86.678	Anas_platyrhynchos
ENSMLUG00000000889	RBM47	100	85.524	ENSACAG00000011833	RBM47	100	85.358	Anolis_carolinensis
ENSMLUG00000000889	RBM47	100	93.456	ENSANAG00000029440	RBM47	100	93.289	Aotus_nancymaae
ENSMLUG00000000889	RBM47	100	75.654	ENSACLG00000016902	rbm47	100	82.005	Astatotilapia_calliptera
ENSMLUG00000000889	RBM47	100	75.493	ENSAMXG00000021794	rbm47	100	75.987	Astyanax_mexicanus
ENSMLUG00000000889	RBM47	100	94.595	ENSBTAG00000002356	RBM47	100	94.426	Bos_taurus
ENSMLUG00000000889	RBM47	100	93.243	ENSCJAG00000019385	RBM47	100	92.965	Callithrix_jacchus
ENSMLUG00000000889	RBM47	96	92.281	ENSCAFG00000015898	RBM47	100	92.088	Canis_familiaris
ENSMLUG00000000889	RBM47	83	92.480	ENSCAFG00020010558	RBM47	94	92.612	Canis_lupus_dingo
ENSMLUG00000000889	RBM47	100	94.595	ENSCHIG00000026214	RBM47	100	94.257	Capra_hircus
ENSMLUG00000000889	RBM47	86	77.843	ENSTSYG00000033612	RBM47	96	82.927	Carlito_syrichta
ENSMLUG00000000889	RBM47	100	85.859	ENSCAPG00000008426	RBM47	100	86.364	Cavia_aperea
ENSMLUG00000000889	RBM47	100	92.088	ENSCPOG00000014100	RBM47	100	94.430	Cavia_porcellus
ENSMLUG00000000889	RBM47	100	93.412	ENSCCAG00000030129	-	100	93.132	Cebus_capucinus
ENSMLUG00000000889	RBM47	99	65.093	ENSCCAG00000024397	-	99	63.912	Cebus_capucinus
ENSMLUG00000000889	RBM47	100	92.724	ENSCATG00000042064	RBM47	100	93.401	Cercocebus_atys
ENSMLUG00000000889	RBM47	100	92.243	ENSCLAG00000001684	RBM47	100	93.671	Chinchilla_lanigera
ENSMLUG00000000889	RBM47	100	92.282	ENSCSAG00000017060	RBM47	100	93.121	Chlorocebus_sabaeus
ENSMLUG00000000889	RBM47	89	91.139	ENSCHOG00000011731	RBM47	88	88.608	Choloepus_hoffmanni
ENSMLUG00000000889	RBM47	100	90.117	ENSCPBG00000013831	RBM47	100	89.615	Chrysemys_picta_bellii
ENSMLUG00000000889	RBM47	100	93.570	ENSCANG00000019997	RBM47	100	93.232	Colobus_angolensis_palliatus
ENSMLUG00000000889	RBM47	89	87.599	ENSCGRG00001020102	-	100	67.458	Cricetulus_griseus_chok1gshd
ENSMLUG00000000889	RBM47	100	90.436	ENSCGRG00001000623	-	100	89.933	Cricetulus_griseus_chok1gshd
ENSMLUG00000000889	RBM47	100	89.597	ENSCGRG00000007762	-	100	91.772	Cricetulus_griseus_crigri
ENSMLUG00000000889	RBM47	89	87.071	ENSCGRG00000014760	-	100	67.119	Cricetulus_griseus_crigri
ENSMLUG00000000889	RBM47	100	74.329	ENSCSEG00000004545	rbm47	100	74.664	Cynoglossus_semilaevis
ENSMLUG00000000889	RBM47	100	75.798	ENSCVAG00000020144	rbm47	100	80.916	Cyprinodon_variegatus
ENSMLUG00000000889	RBM47	100	77.063	ENSDARG00000061985	rbm47	100	77.393	Danio_rerio
ENSMLUG00000000889	RBM47	100	92.881	ENSDNOG00000046854	RBM47	100	93.220	Dasypus_novemcinctus
ENSMLUG00000000889	RBM47	100	92.965	ENSDORG00000010144	Rbm47	100	92.630	Dipodomys_ordii
ENSMLUG00000000889	RBM47	97	93.092	ENSETEG00000009194	RBM47	100	91.611	Echinops_telfairi
ENSMLUG00000000889	RBM47	95	59.413	ENSEBUG00000011912	rbm47	95	60.348	Eptatretus_burgeri
ENSMLUG00000000889	RBM47	100	94.257	ENSEASG00005008443	RBM47	100	94.595	Equus_asinus_asinus
ENSMLUG00000000889	RBM47	100	94.257	ENSECAG00000004400	RBM47	100	94.595	Equus_caballus
ENSMLUG00000000889	RBM47	75	92.641	ENSEEUG00000001194	RBM47	75	93.074	Erinaceus_europaeus
ENSMLUG00000000889	RBM47	100	73.779	ENSELUG00000006148	rbm47	100	80.605	Esox_lucius
ENSMLUG00000000889	RBM47	100	94.755	ENSFCAG00000012399	RBM47	100	94.416	Felis_catus
ENSMLUG00000000889	RBM47	100	88.926	ENSFALG00000002861	RBM47	100	88.591	Ficedula_albicollis
ENSMLUG00000000889	RBM47	100	91.723	ENSFDAG00000016326	RBM47	100	91.047	Fukomys_damarensis
ENSMLUG00000000889	RBM47	100	77.181	ENSFHEG00000007938	rbm47	100	76.007	Fundulus_heteroclitus
ENSMLUG00000000889	RBM47	100	74.026	ENSGMOG00000014802	rbm47	100	73.539	Gadus_morhua
ENSMLUG00000000889	RBM47	64	90.186	ENSGALG00000014267	RBM47	99	89.390	Gallus_gallus
ENSMLUG00000000889	RBM47	62	84.324	ENSGAFG00000020571	rbm47	97	84.324	Gambusia_affinis
ENSMLUG00000000889	RBM47	100	74.346	ENSGACG00000016223	rbm47	100	79.389	Gasterosteus_aculeatus
ENSMLUG00000000889	RBM47	100	90.285	ENSGAGG00000020051	RBM47	100	89.782	Gopherus_agassizii
ENSMLUG00000000889	RBM47	100	92.724	ENSGGOG00000001367	RBM47	100	93.401	Gorilla_gorilla
ENSMLUG00000000889	RBM47	100	75.407	ENSHBUG00000003520	rbm47	100	82.005	Haplochromis_burtoni
ENSMLUG00000000889	RBM47	84	86.066	ENSHGLG00000016914	RBM47	100	93.671	Heterocephalus_glaber_female
ENSMLUG00000000889	RBM47	100	82.064	ENSHGLG00100003071	-	100	80.880	Heterocephalus_glaber_male
ENSMLUG00000000889	RBM47	100	91.032	ENSHGLG00100014028	-	100	93.671	Heterocephalus_glaber_male
ENSMLUG00000000889	RBM47	99	76.678	ENSHCOG00000002074	rbm47	99	79.389	Hippocampus_comes
ENSMLUG00000000889	RBM47	100	76.807	ENSIPUG00000004743	rbm47	100	76.303	Ictalurus_punctatus
ENSMLUG00000000889	RBM47	100	91.457	ENSSTOG00000004727	RBM47	100	93.671	Ictidomys_tridecemlineatus
ENSMLUG00000000889	RBM47	100	91.792	ENSJJAG00000013823	Rbm47	100	92.630	Jaculus_jaculus
ENSMLUG00000000889	RBM47	100	77.926	ENSKMAG00000000084	rbm47	100	79.644	Kryptolebias_marmoratus
ENSMLUG00000000889	RBM47	100	76.421	ENSLBEG00000008436	rbm47	100	77.863	Labrus_bergylta
ENSMLUG00000000889	RBM47	100	86.050	ENSLACG00000007196	RBM47	100	85.042	Latimeria_chalumnae
ENSMLUG00000000889	RBM47	100	81.681	ENSLOCG00000012966	rbm47	95	80.840	Lepisosteus_oculatus
ENSMLUG00000000889	RBM47	100	91.779	ENSLAFG00000011998	RBM47	100	92.114	Loxodonta_africana
ENSMLUG00000000889	RBM47	100	92.724	ENSMFAG00000037967	RBM47	100	93.401	Macaca_fascicularis
ENSMLUG00000000889	RBM47	100	92.282	ENSMMUG00000012036	RBM47	100	93.782	Macaca_mulatta
ENSMLUG00000000889	RBM47	100	92.724	ENSMNEG00000040774	RBM47	100	93.232	Macaca_nemestrina
ENSMLUG00000000889	RBM47	100	95.238	ENSMLEG00000041432	RBM47	100	95.238	Mandrillus_leucophaeus
ENSMLUG00000000889	RBM47	100	76.519	ENSMAMG00000019143	rbm47	100	82.051	Mastacembelus_armatus
ENSMLUG00000000889	RBM47	100	75.654	ENSMZEG00005023659	rbm47	99	82.005	Maylandia_zebra
ENSMLUG00000000889	RBM47	100	88.314	ENSMGAG00000012226	RBM47	100	87.479	Meleagris_gallopavo
ENSMLUG00000000889	RBM47	100	91.077	ENSMAUG00000006493	Rbm47	100	92.405	Mesocricetus_auratus
ENSMLUG00000000889	RBM47	100	87.648	ENSMICG00000026417	RBM47	100	88.276	Microcebus_murinus
ENSMLUG00000000889	RBM47	100	91.582	ENSMOCG00000021170	Rbm47	100	93.038	Microtus_ochrogaster
ENSMLUG00000000889	RBM47	100	76.683	ENSMMOG00000007260	rbm47	100	74.713	Mola_mola
ENSMLUG00000000889	RBM47	52	80.511	ENSMODG00000015426	-	97	80.511	Monodelphis_domestica
ENSMLUG00000000889	RBM47	100	89.394	ENSMODG00000007003	RBM47	100	88.552	Monodelphis_domestica
ENSMLUG00000000889	RBM47	100	80.372	ENSMODG00000020561	-	100	80.711	Monodelphis_domestica
ENSMLUG00000000889	RBM47	100	75.960	ENSMALG00000005167	rbm47	100	80.818	Monopterus_albus
ENSMLUG00000000889	RBM47	100	91.231	MGP_CAROLIEiJ_G0027258	Rbm47	100	91.772	Mus_caroli
ENSMLUG00000000889	RBM47	100	91.568	ENSMUSG00000070780	Rbm47	100	91.772	Mus_musculus
ENSMLUG00000000889	RBM47	100	91.231	MGP_PahariEiJ_G0017040	Rbm47	100	91.139	Mus_pahari
ENSMLUG00000000889	RBM47	100	92.034	MGP_SPRETEiJ_G0028253	Rbm47	100	91.772	Mus_spretus
ENSMLUG00000000889	RBM47	100	93.266	ENSMPUG00000006177	RBM47	94	93.771	Mustela_putorius_furo
ENSMLUG00000000889	RBM47	100	92.437	ENSNGAG00000003325	Rbm47	100	92.101	Nannospalax_galili
ENSMLUG00000000889	RBM47	100	75.856	ENSNBRG00000015092	rbm47	100	75.856	Neolamprologus_brichardi
ENSMLUG00000000889	RBM47	100	92.724	ENSNLEG00000017151	RBM47	100	93.401	Nomascus_leucogenys
ENSMLUG00000000889	RBM47	73	85.315	ENSMEUG00000009516	-	99	84.149	Notamacropus_eugenii
ENSMLUG00000000889	RBM47	75	93.827	ENSOPRG00000016507	-	75	93.827	Ochotona_princeps
ENSMLUG00000000889	RBM47	100	90.894	ENSODEG00000004873	RBM47	100	92.243	Octodon_degus
ENSMLUG00000000889	RBM47	100	75.654	ENSONIG00000009061	rbm47	100	74.837	Oreochromis_niloticus
ENSMLUG00000000889	RBM47	100	85.762	ENSOANG00000008978	RBM47	100	85.427	Ornithorhynchus_anatinus
ENSMLUG00000000889	RBM47	100	93.423	ENSOCUG00000012034	RBM47	100	92.917	Oryctolagus_cuniculus
ENSMLUG00000000889	RBM47	100	75.753	ENSORLG00000005847	rbm47	100	80.769	Oryzias_latipes
ENSMLUG00000000889	RBM47	100	75.920	ENSORLG00020005154	rbm47	100	80.769	Oryzias_latipes_hni
ENSMLUG00000000889	RBM47	100	75.920	ENSORLG00015000066	rbm47	100	80.513	Oryzias_latipes_hsok
ENSMLUG00000000889	RBM47	100	76.923	ENSOMEG00000010730	rbm47	100	75.793	Oryzias_melastigma
ENSMLUG00000000889	RBM47	100	85.593	ENSOGAG00000025193	-	100	84.915	Otolemur_garnettii
ENSMLUG00000000889	RBM47	100	93.098	ENSOGAG00000029367	-	100	92.929	Otolemur_garnettii
ENSMLUG00000000889	RBM47	100	85.956	ENSOARG00000012711	RBM47	100	85.956	Ovis_aries
ENSMLUG00000000889	RBM47	100	92.555	ENSPPAG00000029763	RBM47	100	93.232	Pan_paniscus
ENSMLUG00000000889	RBM47	100	91.201	ENSPPRG00000012873	RBM47	100	94.960	Panthera_pardus
ENSMLUG00000000889	RBM47	85	91.617	ENSPTIG00000017046	RBM47	100	91.218	Panthera_tigris_altaica
ENSMLUG00000000889	RBM47	100	92.724	ENSPTRG00000016006	RBM47	100	93.401	Pan_troglodytes
ENSMLUG00000000889	RBM47	100	92.724	ENSPANG00000005980	RBM47	100	93.401	Papio_anubis
ENSMLUG00000000889	RBM47	96	75.826	ENSPKIG00000013431	RBM47	100	73.658	Paramormyrops_kingsleyae
ENSMLUG00000000889	RBM47	96	78.360	ENSPKIG00000005037	rbm47	100	75.868	Paramormyrops_kingsleyae
ENSMLUG00000000889	RBM47	89	90.737	ENSPSIG00000017516	RBM47	97	90.170	Pelodiscus_sinensis
ENSMLUG00000000889	RBM47	100	75.503	ENSPMGG00000018540	rbm47	100	75.503	Periophthalmus_magnuspinnatus
ENSMLUG00000000889	RBM47	100	91.261	ENSPEMG00000011088	Rbm47	100	91.092	Peromyscus_maniculatus_bairdii
ENSMLUG00000000889	RBM47	100	76.948	ENSPFOG00000007997	rbm47	100	75.812	Poecilia_formosa
ENSMLUG00000000889	RBM47	100	76.911	ENSPLAG00000002072	rbm47	99	84.324	Poecilia_latipinna
ENSMLUG00000000889	RBM47	100	78.333	ENSPMEG00000017492	rbm47	100	80.916	Poecilia_mexicana
ENSMLUG00000000889	RBM47	100	77.073	ENSPREG00000008456	rbm47	99	84.595	Poecilia_reticulata
ENSMLUG00000000889	RBM47	98	79.258	ENSPPYG00000014688	RBM47	100	79.089	Pongo_abelii
ENSMLUG00000000889	RBM47	81	93.035	ENSPCAG00000011879	RBM47	81	94.279	Procavia_capensis
ENSMLUG00000000889	RBM47	100	90.169	ENSPCOG00000023451	RBM47	100	91.525	Propithecus_coquereli
ENSMLUG00000000889	RBM47	100	94.108	ENSPVAG00000003812	RBM47	100	93.939	Pteropus_vampyrus
ENSMLUG00000000889	RBM47	100	75.447	ENSPNYG00000022868	rbm47	100	75.610	Pundamilia_nyererei
ENSMLUG00000000889	RBM47	100	75.862	ENSPNAG00000007940	rbm47	100	76.190	Pygocentrus_nattereri
ENSMLUG00000000889	RBM47	100	91.400	ENSRNOG00000002408	Rbm47	100	91.062	Rattus_norvegicus
ENSMLUG00000000889	RBM47	100	93.570	ENSRBIG00000039601	RBM47	100	93.232	Rhinopithecus_bieti
ENSMLUG00000000889	RBM47	100	93.570	ENSRROG00000044696	RBM47	100	93.232	Rhinopithecus_roxellana
ENSMLUG00000000889	RBM47	100	90.525	ENSSBOG00000028475	RBM47	100	94.033	Saimiri_boliviensis_boliviensis
ENSMLUG00000000889	RBM47	100	90.203	ENSSHAG00000017576	RBM47	100	89.189	Sarcophilus_harrisii
ENSMLUG00000000889	RBM47	100	73.798	ENSSFOG00015012445	rbm47	100	73.754	Scleropages_formosus
ENSMLUG00000000889	RBM47	100	74.037	ENSSFOG00015024101	RBM47	100	73.367	Scleropages_formosus
ENSMLUG00000000889	RBM47	100	74.959	ENSSMAG00000009744	rbm47	100	80.051	Scophthalmus_maximus
ENSMLUG00000000889	RBM47	100	78.523	ENSSDUG00000022684	rbm47	100	77.517	Seriola_dumerili
ENSMLUG00000000889	RBM47	100	78.523	ENSSLDG00000003109	rbm47	100	80.605	Seriola_lalandi_dorsalis
ENSMLUG00000000889	RBM47	85	92.617	ENSSARG00000001735	RBM47	84	92.617	Sorex_araneus
ENSMLUG00000000889	RBM47	100	87.227	ENSSPUG00000007515	RBM47	100	88.594	Sphenodon_punctatus
ENSMLUG00000000889	RBM47	100	78.930	ENSSPAG00000001257	rbm47	100	81.425	Stegastes_partitus
ENSMLUG00000000889	RBM47	100	94.595	ENSSSCG00000008796	RBM47	100	94.088	Sus_scrofa
ENSMLUG00000000889	RBM47	100	89.076	ENSTGUG00000008705	RBM47	100	88.739	Taeniopygia_guttata
ENSMLUG00000000889	RBM47	98	77.172	ENSTRUG00000014050	rbm47	99	75.639	Takifugu_rubripes
ENSMLUG00000000889	RBM47	100	75.738	ENSTNIG00000006127	rbm47	100	74.918	Tetraodon_nigroviridis
ENSMLUG00000000889	RBM47	77	91.026	ENSTBEG00000001607	RBM47	76	91.026	Tupaia_belangeri
ENSMLUG00000000889	RBM47	100	94.068	ENSTTRG00000002839	RBM47	100	94.237	Tursiops_truncatus
ENSMLUG00000000889	RBM47	100	93.434	ENSUAMG00000021346	RBM47	100	93.603	Ursus_americanus
ENSMLUG00000000889	RBM47	56	94.652	ENSVPAG00000000641	-	57	93.836	Vicugna_pacos
ENSMLUG00000000889	RBM47	96	92.619	ENSVVUG00000014774	RBM47	100	92.243	Vulpes_vulpes
ENSMLUG00000000889	RBM47	100	85.473	ENSXETG00000012802	rbm47	100	85.473	Xenopus_tropicalis
ENSMLUG00000000889	RBM47	87	84.054	ENSXCOG00000000780	rbm47	99	84.054	Xiphophorus_couchianus
ENSMLUG00000000889	RBM47	100	76.183	ENSXMAG00000009874	rbm47	100	80.407	Xiphophorus_maculatus