EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000001081 (Gene tree)
Gene ID: 102434548
Gene Symbol: SAFB
Alias: HET|SAFB1
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 36153 bases
Position: chrGL430108:293158-329310
Accession: 102434548
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000000998	RRM_5	PF13893.6	2.3e-07	1	1
ENSMLUP00000000998	RRM_1	PF00076.22	2.2e-13	1	1
ENSMLUP00000000998	SAP	PF02037.27	9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000001092	SAFB-201	2751	XM_006101084	ENSMLUP00000000998	916 (aa)	XP_006101146	G1NUT3

Gene Model

Click here to download ENSMLUG00000001081's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000001081's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000001081	SAFB	100	66.909	ENSMLUG00000001050	SAFB2	98	69.495

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000001081	SAFB	100	91.068	ENSG00000160633	SAFB	100	91.068	Homo_sapiens
ENSMLUG00000001081	SAFB	90	44.816	ENSAPOG00000022508	safb	98	43.791	Acanthochromis_polyacanthus
ENSMLUG00000001081	SAFB	100	92.717	ENSAMEG00000012254	SAFB	98	94.085	Ailuropoda_melanoleuca
ENSMLUG00000001081	SAFB	92	40.231	ENSACIG00000006247	safb	98	43.645	Amphilophus_citrinellus
ENSMLUG00000001081	SAFB	90	44.037	ENSAOCG00000006308	safb	98	43.894	Amphiprion_ocellaris
ENSMLUG00000001081	SAFB	90	44.189	ENSAPEG00000023342	safb	98	43.511	Amphiprion_percula
ENSMLUG00000001081	SAFB	95	42.111	ENSATEG00000004998	safb	98	44.494	Anabas_testudineus
ENSMLUG00000001081	SAFB	89	63.853	ENSAPLG00000006355	-	99	65.279	Anas_platyrhynchos
ENSMLUG00000001081	SAFB	93	65.593	ENSAPLG00000005780	-	100	65.593	Anas_platyrhynchos
ENSMLUG00000001081	SAFB	100	91.068	ENSANAG00000028821	SAFB	100	91.068	Aotus_nancymaae
ENSMLUG00000001081	SAFB	95	41.814	ENSACLG00000001926	safb	98	44.137	Astatotilapia_calliptera
ENSMLUG00000001081	SAFB	91	45.202	ENSAMXG00000018154	safb	98	43.629	Astyanax_mexicanus
ENSMLUG00000001081	SAFB	100	89.651	ENSBTAG00000007875	SAFB	100	89.651	Bos_taurus
ENSMLUG00000001081	SAFB	83	94.340	ENSCJAG00000017081	SAFB	100	94.340	Callithrix_jacchus
ENSMLUG00000001081	SAFB	100	94.444	ENSCAFG00000018803	SAFB	87	94.444	Canis_familiaris
ENSMLUG00000001081	SAFB	100	94.444	ENSCAFG00020018943	SAFB	100	94.444	Canis_lupus_dingo
ENSMLUG00000001081	SAFB	100	88.453	ENSCHIG00000007262	SAFB	98	91.981	Capra_hircus
ENSMLUG00000001081	SAFB	58	75.696	ENSTSYG00000001851	-	100	75.696	Carlito_syrichta
ENSMLUG00000001081	SAFB	100	87.049	ENSCPOG00000026322	SAFB	100	87.049	Cavia_porcellus
ENSMLUG00000001081	SAFB	100	91.186	ENSCCAG00000020193	SAFB	100	91.077	Cebus_capucinus
ENSMLUG00000001081	SAFB	100	91.394	ENSCATG00000029994	SAFB	100	91.394	Cercocebus_atys
ENSMLUG00000001081	SAFB	100	87.834	ENSCLAG00000007734	SAFB	100	89.541	Chinchilla_lanigera
ENSMLUG00000001081	SAFB	100	91.285	ENSCSAG00000009949	SAFB	100	91.285	Chlorocebus_sabaeus
ENSMLUG00000001081	SAFB	86	90.476	ENSCHOG00000003208	SAFB	93	90.476	Choloepus_hoffmanni
ENSMLUG00000001081	SAFB	91	60.791	ENSCPBG00000010936	-	99	62.260	Chrysemys_picta_bellii
ENSMLUG00000001081	SAFB	91	65.012	ENSCPBG00000010928	-	99	65.366	Chrysemys_picta_bellii
ENSMLUG00000001081	SAFB	96	84.058	ENSCANG00000004774	-	99	91.721	Colobus_angolensis_palliatus
ENSMLUG00000001081	SAFB	100	85.294	ENSCANG00000019754	-	100	85.294	Colobus_angolensis_palliatus
ENSMLUG00000001081	SAFB	100	83.280	ENSCGRG00001002254	Safb	100	83.280	Cricetulus_griseus_chok1gshd
ENSMLUG00000001081	SAFB	90	80.527	ENSCGRG00000011529	Safb	96	80.527	Cricetulus_griseus_crigri
ENSMLUG00000001081	SAFB	93	41.067	ENSCSEG00000019870	safb	98	41.084	Cynoglossus_semilaevis
ENSMLUG00000001081	SAFB	94	39.002	ENSCVAG00000002226	safb	98	40.067	Cyprinodon_variegatus
ENSMLUG00000001081	SAFB	89	41.965	ENSDARG00000020467	safb	99	44.102	Danio_rerio
ENSMLUG00000001081	SAFB	100	90.642	ENSDNOG00000015746	SAFB	95	91.616	Dasypus_novemcinctus
ENSMLUG00000001081	SAFB	100	81.847	ENSDORG00000016200	Safb	100	83.652	Dipodomys_ordii
ENSMLUG00000001081	SAFB	80	80.000	ENSETEG00000018679	SAFB	88	80.000	Echinops_telfairi
ENSMLUG00000001081	SAFB	100	88.299	ENSEASG00005023019	SAFB	100	88.949	Equus_asinus_asinus
ENSMLUG00000001081	SAFB	100	90.087	ENSECAG00000018659	SAFB	89	90.196	Equus_caballus
ENSMLUG00000001081	SAFB	95	42.077	ENSELUG00000022327	safb	98	45.371	Esox_lucius
ENSMLUG00000001081	SAFB	100	94.118	ENSFCAG00000011835	SAFB	100	94.118	Felis_catus
ENSMLUG00000001081	SAFB	91	61.042	ENSFALG00000013881	-	99	62.120	Ficedula_albicollis
ENSMLUG00000001081	SAFB	100	65.843	ENSFALG00000013882	-	89	66.519	Ficedula_albicollis
ENSMLUG00000001081	SAFB	100	70.299	ENSFDAG00000020306	SAFB	99	88.170	Fukomys_damarensis
ENSMLUG00000001081	SAFB	59	45.487	ENSGMOG00000014280	safb	98	40.261	Gadus_morhua
ENSMLUG00000001081	SAFB	100	65.484	ENSGALG00000013365	-	97	66.593	Gallus_gallus
ENSMLUG00000001081	SAFB	100	61.427	ENSGALG00000001948	-	97	64.255	Gallus_gallus
ENSMLUG00000001081	SAFB	94	37.336	ENSGAFG00000016162	safb	98	39.677	Gambusia_affinis
ENSMLUG00000001081	SAFB	95	42.002	ENSGACG00000011385	safb	98	41.567	Gasterosteus_aculeatus
ENSMLUG00000001081	SAFB	95	62.392	ENSGAGG00000008424	-	97	64.182	Gopherus_agassizii
ENSMLUG00000001081	SAFB	73	59.941	ENSGAGG00000017702	-	100	60.386	Gopherus_agassizii
ENSMLUG00000001081	SAFB	100	90.850	ENSGGOG00000015109	SAFB	100	90.850	Gorilla_gorilla
ENSMLUG00000001081	SAFB	95	39.684	ENSHBUG00000009218	safb	98	41.348	Haplochromis_burtoni
ENSMLUG00000001081	SAFB	100	89.400	ENSHGLG00000015883	SAFB	100	89.400	Heterocephalus_glaber_female
ENSMLUG00000001081	SAFB	100	74.334	ENSHGLG00100004228	SAFB	100	78.694	Heterocephalus_glaber_male
ENSMLUG00000001081	SAFB	84	37.563	ENSHCOG00000001705	safb	99	38.870	Hippocampus_comes
ENSMLUG00000001081	SAFB	97	42.997	ENSIPUG00000024869	safb2	98	46.105	Ictalurus_punctatus
ENSMLUG00000001081	SAFB	93	89.770	ENSSTOG00000002783	SAFB	100	89.770	Ictidomys_tridecemlineatus
ENSMLUG00000001081	SAFB	100	84.591	ENSJJAG00000009021	Safb	100	84.910	Jaculus_jaculus
ENSMLUG00000001081	SAFB	90	43.786	ENSKMAG00000022308	safb	98	42.354	Kryptolebias_marmoratus
ENSMLUG00000001081	SAFB	95	42.174	ENSLBEG00000006015	safb	98	44.130	Labrus_bergylta
ENSMLUG00000001081	SAFB	64	51.303	ENSLACG00000018090	SAFB	100	53.361	Latimeria_chalumnae
ENSMLUG00000001081	SAFB	97	46.146	ENSLOCG00000003613	safb	99	48.432	Lepisosteus_oculatus
ENSMLUG00000001081	SAFB	99	89.880	ENSLAFG00000003840	SAFB	100	89.989	Loxodonta_africana
ENSMLUG00000001081	SAFB	100	91.295	ENSMFAG00000003885	SAFB	100	91.186	Macaca_fascicularis
ENSMLUG00000001081	SAFB	100	91.394	ENSMMUG00000017970	SAFB	100	91.394	Macaca_mulatta
ENSMLUG00000001081	SAFB	100	87.922	ENSMNEG00000035637	SAFB	100	87.813	Macaca_nemestrina
ENSMLUG00000001081	SAFB	100	85.792	ENSMLEG00000038637	SAFB	100	84.227	Mandrillus_leucophaeus
ENSMLUG00000001081	SAFB	95	41.740	ENSMAMG00000003357	safb	89	43.626	Mastacembelus_armatus
ENSMLUG00000001081	SAFB	95	41.925	ENSMZEG00005009120	safb	98	44.248	Maylandia_zebra
ENSMLUG00000001081	SAFB	89	60.096	ENSMGAG00000001051	-	97	61.863	Meleagris_gallopavo
ENSMLUG00000001081	SAFB	97	63.697	ENSMGAG00000001101	-	100	64.031	Meleagris_gallopavo
ENSMLUG00000001081	SAFB	53	89.117	ENSMAUG00000005013	Safb	100	89.117	Mesocricetus_auratus
ENSMLUG00000001081	SAFB	85	78.233	ENSMICG00000046795	-	98	90.426	Microcebus_murinus
ENSMLUG00000001081	SAFB	100	88.466	ENSMICG00000008739	-	100	88.248	Microcebus_murinus
ENSMLUG00000001081	SAFB	100	83.387	ENSMOCG00000014040	Safb	100	83.387	Microtus_ochrogaster
ENSMLUG00000001081	SAFB	100	74.283	ENSMODG00000001236	SAFB	98	75.027	Monodelphis_domestica
ENSMLUG00000001081	SAFB	95	41.126	ENSMALG00000020330	safb	97	44.277	Monopterus_albus
ENSMLUG00000001081	SAFB	100	83.511	MGP_CAROLIEiJ_G0021780	Safb	100	83.511	Mus_caroli
ENSMLUG00000001081	SAFB	100	83.617	ENSMUSG00000071054	Safb	100	83.617	Mus_musculus
ENSMLUG00000001081	SAFB	100	83.422	MGP_PahariEiJ_G0020769	Safb	100	83.422	Mus_pahari
ENSMLUG00000001081	SAFB	100	93.900	ENSMPUG00000006123	SAFB	94	93.900	Mustela_putorius_furo
ENSMLUG00000001081	SAFB	100	80.978	ENSNGAG00000019882	Safb	100	80.978	Nannospalax_galili
ENSMLUG00000001081	SAFB	96	91.364	ENSNLEG00000013551	SAFB	100	91.250	Nomascus_leucogenys
ENSMLUG00000001081	SAFB	88	82.678	ENSOPRG00000011561	-	100	84.029	Ochotona_princeps
ENSMLUG00000001081	SAFB	100	89.968	ENSODEG00000014838	SAFB	100	89.968	Octodon_degus
ENSMLUG00000001081	SAFB	95	41.794	ENSONIG00000002318	safb	98	44.092	Oreochromis_niloticus
ENSMLUG00000001081	SAFB	90	80.649	ENSOCUG00000014628	SAFB	100	77.385	Oryctolagus_cuniculus
ENSMLUG00000001081	SAFB	90	42.563	ENSORLG00000016989	safb	98	41.376	Oryzias_latipes
ENSMLUG00000001081	SAFB	94	39.909	ENSORLG00020000404	safb	98	39.410	Oryzias_latipes_hni
ENSMLUG00000001081	SAFB	94	42.031	ENSORLG00015010733	safb	98	41.747	Oryzias_latipes_hsok
ENSMLUG00000001081	SAFB	95	38.049	ENSOMEG00000009066	safb	98	41.050	Oryzias_melastigma
ENSMLUG00000001081	SAFB	100	86.659	ENSOGAG00000027769	SAFB	100	87.527	Otolemur_garnettii
ENSMLUG00000001081	SAFB	78	83.776	ENSOARG00000007856	-	100	82.058	Ovis_aries
ENSMLUG00000001081	SAFB	100	86.166	ENSOARG00000007662	-	100	86.166	Ovis_aries
ENSMLUG00000001081	SAFB	100	90.860	ENSPPAG00000035129	SAFB	100	90.751	Pan_paniscus
ENSMLUG00000001081	SAFB	100	94.118	ENSPPRG00000017197	SAFB	100	94.118	Panthera_pardus
ENSMLUG00000001081	SAFB	100	90.860	ENSPTRG00000010335	SAFB	100	90.751	Pan_troglodytes
ENSMLUG00000001081	SAFB	100	91.186	ENSPANG00000007770	SAFB	100	91.077	Papio_anubis
ENSMLUG00000001081	SAFB	90	43.003	ENSPKIG00000009902	safb	98	44.201	Paramormyrops_kingsleyae
ENSMLUG00000001081	SAFB	100	61.579	ENSPSIG00000011679	-	100	64.374	Pelodiscus_sinensis
ENSMLUG00000001081	SAFB	99	62.355	ENSPSIG00000009367	-	97	63.027	Pelodiscus_sinensis
ENSMLUG00000001081	SAFB	100	83.778	ENSPEMG00000020428	Safb	100	83.778	Peromyscus_maniculatus_bairdii
ENSMLUG00000001081	SAFB	59	79.558	ENSPCIG00000009504	-	100	79.336	Phascolarctos_cinereus
ENSMLUG00000001081	SAFB	94	39.233	ENSPFOG00000007745	safb	99	42.617	Poecilia_formosa
ENSMLUG00000001081	SAFB	94	37.013	ENSPLAG00000001614	safb	98	41.379	Poecilia_latipinna
ENSMLUG00000001081	SAFB	94	39.121	ENSPMEG00000021023	safb	98	41.667	Poecilia_mexicana
ENSMLUG00000001081	SAFB	100	91.176	ENSPPYG00000009428	SAFB	100	91.176	Pongo_abelii
ENSMLUG00000001081	SAFB	100	85.590	ENSPCAG00000006475	SAFB	100	85.915	Procavia_capensis
ENSMLUG00000001081	SAFB	100	83.948	ENSPCOG00000014090	SAFB	100	83.623	Propithecus_coquereli
ENSMLUG00000001081	SAFB	100	88.357	ENSPVAG00000004913	SAFB	100	88.357	Pteropus_vampyrus
ENSMLUG00000001081	SAFB	56	48.231	ENSPNAG00000021838	safb	98	45.279	Pygocentrus_nattereri
ENSMLUG00000001081	SAFB	100	83.139	ENSRNOG00000050543	Safb	100	83.669	Rattus_norvegicus
ENSMLUG00000001081	SAFB	100	78.237	ENSRBIG00000042509	SAFB	88	94.624	Rhinopithecus_bieti
ENSMLUG00000001081	SAFB	100	91.295	ENSRROG00000029278	SAFB	100	91.186	Rhinopithecus_roxellana
ENSMLUG00000001081	SAFB	100	91.285	ENSSBOG00000026291	SAFB	100	91.285	Saimiri_boliviensis_boliviensis
ENSMLUG00000001081	SAFB	96	43.743	ENSSFOG00015008156	safb	98	46.360	Scleropages_formosus
ENSMLUG00000001081	SAFB	95	40.043	ENSSMAG00000009316	safb	98	42.162	Scophthalmus_maximus
ENSMLUG00000001081	SAFB	95	39.688	ENSSDUG00000009652	safb	98	42.295	Seriola_dumerili
ENSMLUG00000001081	SAFB	95	41.998	ENSSLDG00000001670	safb	98	42.167	Seriola_lalandi_dorsalis
ENSMLUG00000001081	SAFB	93	85.414	ENSSARG00000010475	SAFB	100	85.764	Sorex_araneus
ENSMLUG00000001081	SAFB	87	58.125	ENSSPUG00000009747	-	99	59.750	Sphenodon_punctatus
ENSMLUG00000001081	SAFB	90	41.512	ENSSPAG00000015682	safb	98	41.273	Stegastes_partitus
ENSMLUG00000001081	SAFB	100	92.465	ENSSSCG00000013522	SAFB	99	93.959	Sus_scrofa
ENSMLUG00000001081	SAFB	96	64.653	ENSTGUG00000000502	-	97	65.438	Taeniopygia_guttata
ENSMLUG00000001081	SAFB	93	62.245	ENSTGUG00000000489	-	97	65.416	Taeniopygia_guttata
ENSMLUG00000001081	SAFB	91	40.183	ENSTRUG00000003567	safb	98	41.794	Takifugu_rubripes
ENSMLUG00000001081	SAFB	88	44.019	ENSTNIG00000015470	safb	100	44.125	Tetraodon_nigroviridis
ENSMLUG00000001081	SAFB	74	80.303	ENSTBEG00000013124	-	74	80.303	Tupaia_belangeri
ENSMLUG00000001081	SAFB	92	95.238	ENSTTRG00000013588	SAFB	92	95.238	Tursiops_truncatus
ENSMLUG00000001081	SAFB	78	91.713	ENSUAMG00000024543	SAFB	94	91.096	Ursus_americanus
ENSMLUG00000001081	SAFB	88	93.290	ENSUMAG00000009734	SAFB	96	93.344	Ursus_maritimus
ENSMLUG00000001081	SAFB	73	91.667	ENSVPAG00000012043	SAFB	79	91.369	Vicugna_pacos
ENSMLUG00000001081	SAFB	100	94.336	ENSVVUG00000013720	SAFB	87	94.336	Vulpes_vulpes
ENSMLUG00000001081	SAFB	66	51.400	ENSXETG00000008755	safb	97	54.396	Xenopus_tropicalis
ENSMLUG00000001081	SAFB	95	38.976	ENSXMAG00000003458	safb	98	41.796	Xiphophorus_maculatus