EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000001131 (Gene tree)
Gene ID: 102433987
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 36387 bases
Position: chrGL429907:184236-220622
Accession: 102433987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000001032	CMS1	PF14617.6	4.1e-31	1	1
ENSMLUP00000001032	DEAD	PF00270.29	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000001128	CMSS1-201	792	XM_006094686	ENSMLUP00000001032	263 (aa)	XP_006094748	G1NUW1

Gene Model

Click here to download ENSMLUG00000001131's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000001131's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000001131	CMSS1	99	90.385	ENSG00000184220	CMSS1	99	91.566	Homo_sapiens
ENSMLUG00000001131	CMSS1	78	64.216	ENSAPOG00000010604	cmss1	99	57.831	Acanthochromis_polyacanthus
ENSMLUG00000001131	CMSS1	99	90.038	ENSAMEG00000004092	CMSS1	100	90.038	Ailuropoda_melanoleuca
ENSMLUG00000001131	CMSS1	78	53.922	ENSACIG00000021854	cmss1	91	50.000	Amphilophus_citrinellus
ENSMLUG00000001131	CMSS1	78	64.216	ENSAOCG00000013361	cmss1	69	63.861	Amphiprion_ocellaris
ENSMLUG00000001131	CMSS1	78	64.216	ENSAPEG00000005829	cmss1	69	63.861	Amphiprion_percula
ENSMLUG00000001131	CMSS1	86	61.304	ENSATEG00000008209	cmss1	97	54.579	Anabas_testudineus
ENSMLUG00000001131	CMSS1	88	68.966	ENSAPLG00000010542	CMSS1	100	68.966	Anas_platyrhynchos
ENSMLUG00000001131	CMSS1	98	63.910	ENSACAG00000011065	CMSS1	97	63.910	Anolis_carolinensis
ENSMLUG00000001131	CMSS1	99	90.038	ENSANAG00000023565	CMSS1	99	89.695	Aotus_nancymaae
ENSMLUG00000001131	CMSS1	78	63.235	ENSACLG00000027294	cmss1	83	56.557	Astatotilapia_calliptera
ENSMLUG00000001131	CMSS1	77	54.455	ENSAMXG00000002046	cmss1	68	54.455	Astyanax_mexicanus
ENSMLUG00000001131	CMSS1	95	89.641	ENSBTAG00000013663	CMSS1	93	89.575	Bos_taurus
ENSMLUG00000001131	CMSS1	99	89.655	ENSCJAG00000000610	CMSS1	99	89.655	Callithrix_jacchus
ENSMLUG00000001131	CMSS1	99	92.337	ENSCAFG00000009230	CMSS1	94	92.337	Canis_familiaris
ENSMLUG00000001131	CMSS1	89	84.615	ENSCAFG00020024156	-	76	80.972	Canis_lupus_dingo
ENSMLUG00000001131	CMSS1	98	92.278	ENSCAFG00020009464	-	94	91.923	Canis_lupus_dingo
ENSMLUG00000001131	CMSS1	98	89.961	ENSCHIG00000013003	CMSS1	93	89.961	Capra_hircus
ENSMLUG00000001131	CMSS1	99	87.356	ENSTSYG00000009266	CMSS1	99	87.356	Carlito_syrichta
ENSMLUG00000001131	CMSS1	86	73.160	ENSCAPG00000013584	CMSS1	100	73.593	Cavia_aperea
ENSMLUG00000001131	CMSS1	99	86.923	ENSCPOG00000014680	CMSS1	92	86.923	Cavia_porcellus
ENSMLUG00000001131	CMSS1	99	91.571	ENSCCAG00000034685	CMSS1	99	91.221	Cebus_capucinus
ENSMLUG00000001131	CMSS1	99	91.571	ENSCATG00000031980	CMSS1	99	91.188	Cercocebus_atys
ENSMLUG00000001131	CMSS1	88	91.775	ENSCLAG00000011241	CMSS1	98	91.775	Chinchilla_lanigera
ENSMLUG00000001131	CMSS1	94	91.903	ENSCSAG00000006024	CMSS1	100	91.903	Chlorocebus_sabaeus
ENSMLUG00000001131	CMSS1	99	71.648	ENSCHOG00000012098	CMSS1	94	71.648	Choloepus_hoffmanni
ENSMLUG00000001131	CMSS1	75	38.119	ENSCING00000014848	-	100	39.153	Ciona_intestinalis
ENSMLUG00000001131	CMSS1	99	90.769	ENSCANG00000031337	CMSS1	99	90.421	Colobus_angolensis_palliatus
ENSMLUG00000001131	CMSS1	99	82.692	ENSCGRG00001014305	Cmss1	93	82.692	Cricetulus_griseus_chok1gshd
ENSMLUG00000001131	CMSS1	98	83.333	ENSCGRG00000006722	Cmss1	99	83.333	Cricetulus_griseus_crigri
ENSMLUG00000001131	CMSS1	85	60.088	ENSCSEG00000004958	cmss1	68	62.376	Cynoglossus_semilaevis
ENSMLUG00000001131	CMSS1	78	61.275	ENSCVAG00000005039	cmss1	69	61.386	Cyprinodon_variegatus
ENSMLUG00000001131	CMSS1	87	52.790	ENSDARG00000112579	cmss1	84	50.403	Danio_rerio
ENSMLUG00000001131	CMSS1	99	87.786	ENSDNOG00000040418	CMSS1	92	87.405	Dasypus_novemcinctus
ENSMLUG00000001131	CMSS1	99	88.462	ENSDORG00000010461	Cmss1	92	88.462	Dipodomys_ordii
ENSMLUG00000001131	CMSS1	50	51.515	ENSEBUG00000002156	-	96	51.515	Eptatretus_burgeri
ENSMLUG00000001131	CMSS1	99	83.142	ENSEASG00005010966	CMSS1	99	92.308	Equus_asinus_asinus
ENSMLUG00000001131	CMSS1	99	87.405	ENSECAG00000015662	CMSS1	99	90.351	Equus_caballus
ENSMLUG00000001131	CMSS1	87	61.739	ENSEEUG00000007624	-	82	61.304	Erinaceus_europaeus
ENSMLUG00000001131	CMSS1	92	57.551	ENSELUG00000019459	cmss1	81	57.551	Esox_lucius
ENSMLUG00000001131	CMSS1	99	94.615	ENSFCAG00000044577	CMSS1	92	94.615	Felis_catus
ENSMLUG00000001131	CMSS1	91	64.435	ENSFALG00000005816	CMSS1	100	64.435	Ficedula_albicollis
ENSMLUG00000001131	CMSS1	87	89.130	ENSFDAG00000012577	CMSS1	100	89.130	Fukomys_damarensis
ENSMLUG00000001131	CMSS1	87	60.345	ENSFHEG00000012008	cmss1	95	60.345	Fundulus_heteroclitus
ENSMLUG00000001131	CMSS1	78	62.745	ENSGMOG00000016729	cmss1	72	62.376	Gadus_morhua
ENSMLUG00000001131	CMSS1	99	64.794	ENSGALG00000015267	CMSS1	100	64.662	Gallus_gallus
ENSMLUG00000001131	CMSS1	79	63.158	ENSGAFG00000021217	cmss1	76	62.871	Gambusia_affinis
ENSMLUG00000001131	CMSS1	78	57.353	ENSGACG00000002798	cmss1	72	56.931	Gasterosteus_aculeatus
ENSMLUG00000001131	CMSS1	91	70.293	ENSGAGG00000019861	CMSS1	94	68.852	Gopherus_agassizii
ENSMLUG00000001131	CMSS1	99	91.538	ENSGGOG00000014125	CMSS1	99	91.188	Gorilla_gorilla
ENSMLUG00000001131	CMSS1	78	62.745	ENSHBUG00000008431	cmss1	71	62.376	Haplochromis_burtoni
ENSMLUG00000001131	CMSS1	97	85.098	ENSHGLG00000019481	CMSS1	100	85.098	Heterocephalus_glaber_female
ENSMLUG00000001131	CMSS1	98	85.328	ENSHGLG00100010314	CMSS1	100	85.328	Heterocephalus_glaber_male
ENSMLUG00000001131	CMSS1	84	64.706	ENSHCOG00000003222	cmss1	74	64.706	Hippocampus_comes
ENSMLUG00000001131	CMSS1	85	54.464	ENSIPUG00000011591	cmss1	83	52.869	Ictalurus_punctatus
ENSMLUG00000001131	CMSS1	99	90.385	ENSSTOG00000019366	CMSS1	92	90.385	Ictidomys_tridecemlineatus
ENSMLUG00000001131	CMSS1	98	84.170	ENSJJAG00000014894	Cmss1	89	89.604	Jaculus_jaculus
ENSMLUG00000001131	CMSS1	78	53.431	ENSKMAG00000002390	cmss1	80	52.970	Kryptolebias_marmoratus
ENSMLUG00000001131	CMSS1	85	53.306	ENSLBEG00000006298	cmss1	82	58.621	Labrus_bergylta
ENSMLUG00000001131	CMSS1	87	63.793	ENSLACG00000009293	CMSS1	100	63.793	Latimeria_chalumnae
ENSMLUG00000001131	CMSS1	87	56.957	ENSLOCG00000009391	cmss1	86	55.061	Lepisosteus_oculatus
ENSMLUG00000001131	CMSS1	87	89.565	ENSLAFG00000017509	CMSS1	100	89.565	Loxodonta_africana
ENSMLUG00000001131	CMSS1	99	91.923	ENSMFAG00000045006	CMSS1	99	91.571	Macaca_fascicularis
ENSMLUG00000001131	CMSS1	99	91.538	ENSMMUG00000002939	CMSS1	99	91.188	Macaca_mulatta
ENSMLUG00000001131	CMSS1	99	91.538	ENSMNEG00000031315	CMSS1	99	91.188	Macaca_nemestrina
ENSMLUG00000001131	CMSS1	99	91.154	ENSMLEG00000033660	CMSS1	99	90.805	Mandrillus_leucophaeus
ENSMLUG00000001131	CMSS1	78	63.235	ENSMAMG00000017176	cmss1	83	57.613	Mastacembelus_armatus
ENSMLUG00000001131	CMSS1	78	63.235	ENSMZEG00005021886	cmss1	83	56.557	Maylandia_zebra
ENSMLUG00000001131	CMSS1	87	68.696	ENSMGAG00000014360	CMSS1	100	68.696	Meleagris_gallopavo
ENSMLUG00000001131	CMSS1	98	60.618	ENSMAUG00000020609	Cmss1	90	60.618	Mesocricetus_auratus
ENSMLUG00000001131	CMSS1	99	91.154	ENSMICG00000048977	CMSS1	99	90.458	Microcebus_murinus
ENSMLUG00000001131	CMSS1	99	83.846	ENSMOCG00000021937	Cmss1	93	83.846	Microtus_ochrogaster
ENSMLUG00000001131	CMSS1	78	61.275	ENSMMOG00000019794	cmss1	83	60.891	Mola_mola
ENSMLUG00000001131	CMSS1	97	75.000	ENSMODG00000002275	CMSS1	95	75.000	Monodelphis_domestica
ENSMLUG00000001131	CMSS1	92	58.130	ENSMALG00000004250	cmss1	84	57.317	Monopterus_albus
ENSMLUG00000001131	CMSS1	99	83.142	MGP_CAROLIEiJ_G0020824	Cmss1	93	83.142	Mus_caroli
ENSMLUG00000001131	CMSS1	99	84.291	ENSMUSG00000022748	Cmss1	93	84.291	Mus_musculus
ENSMLUG00000001131	CMSS1	99	82.375	MGP_PahariEiJ_G0016524	Cmss1	93	82.375	Mus_pahari
ENSMLUG00000001131	CMSS1	99	83.908	MGP_SPRETEiJ_G0021724	Cmss1	93	83.908	Mus_spretus
ENSMLUG00000001131	CMSS1	99	93.462	ENSMPUG00000011324	CMSS1	99	93.462	Mustela_putorius_furo
ENSMLUG00000001131	CMSS1	99	87.356	ENSNGAG00000020316	Cmss1	93	87.356	Nannospalax_galili
ENSMLUG00000001131	CMSS1	78	62.745	ENSNBRG00000003095	cmss1	69	62.376	Neolamprologus_brichardi
ENSMLUG00000001131	CMSS1	99	93.077	ENSNLEG00000034172	CMSS1	99	92.720	Nomascus_leucogenys
ENSMLUG00000001131	CMSS1	87	66.087	ENSMEUG00000014505	CMSS1	100	66.087	Notamacropus_eugenii
ENSMLUG00000001131	CMSS1	99	90.805	ENSOPRG00000002986	CMSS1	93	90.805	Ochotona_princeps
ENSMLUG00000001131	CMSS1	84	79.545	ENSODEG00000009446	-	85	79.545	Octodon_degus
ENSMLUG00000001131	CMSS1	99	74.330	ENSODEG00000001853	-	93	74.330	Octodon_degus
ENSMLUG00000001131	CMSS1	99	85.385	ENSODEG00000005226	-	92	85.385	Octodon_degus
ENSMLUG00000001131	CMSS1	98	81.008	ENSODEG00000003558	-	91	81.008	Octodon_degus
ENSMLUG00000001131	CMSS1	78	62.255	ENSONIG00000006678	cmss1	77	61.881	Oreochromis_niloticus
ENSMLUG00000001131	CMSS1	98	70.611	ENSOANG00000007529	CMSS1	100	72.766	Ornithorhynchus_anatinus
ENSMLUG00000001131	CMSS1	99	91.571	ENSOCUG00000025366	CMSS1	94	91.571	Oryctolagus_cuniculus
ENSMLUG00000001131	CMSS1	89	60.169	ENSORLG00000020340	cmss1	70	62.871	Oryzias_latipes
ENSMLUG00000001131	CMSS1	88	54.113	ENSORLG00020012235	cmss1	85	56.931	Oryzias_latipes_hni
ENSMLUG00000001131	CMSS1	78	56.863	ENSORLG00015015551	cmss1	75	56.436	Oryzias_latipes_hsok
ENSMLUG00000001131	CMSS1	78	62.745	ENSOMEG00000012555	cmss1	82	58.996	Oryzias_melastigma
ENSMLUG00000001131	CMSS1	87	91.304	ENSOGAG00000002045	CMSS1	100	91.304	Otolemur_garnettii
ENSMLUG00000001131	CMSS1	98	90.000	ENSOARG00000017899	CMSS1	89	90.000	Ovis_aries
ENSMLUG00000001131	CMSS1	99	91.538	ENSPPAG00000038515	CMSS1	95	91.538	Pan_paniscus
ENSMLUG00000001131	CMSS1	99	93.462	ENSPPRG00000016767	CMSS1	92	93.462	Panthera_pardus
ENSMLUG00000001131	CMSS1	99	93.077	ENSPTIG00000018274	CMSS1	92	93.077	Panthera_tigris_altaica
ENSMLUG00000001131	CMSS1	99	90.769	ENSPTRG00000015157	CMSS1	100	91.498	Pan_troglodytes
ENSMLUG00000001131	CMSS1	99	87.692	ENSPANG00000019980	CMSS1	100	87.023	Papio_anubis
ENSMLUG00000001131	CMSS1	87	60.776	ENSPKIG00000012609	cmss1	94	55.159	Paramormyrops_kingsleyae
ENSMLUG00000001131	CMSS1	88	72.727	ENSPSIG00000003849	CMSS1	100	72.727	Pelodiscus_sinensis
ENSMLUG00000001131	CMSS1	90	57.143	ENSPMGG00000010286	cmss1	100	57.143	Periophthalmus_magnuspinnatus
ENSMLUG00000001131	CMSS1	100	83.650	ENSPEMG00000016384	Cmss1	92	84.615	Peromyscus_maniculatus_bairdii
ENSMLUG00000001131	CMSS1	78	52.427	ENSPMAG00000001146	cmss1	98	52.475	Petromyzon_marinus
ENSMLUG00000001131	CMSS1	100	72.556	ENSPCIG00000015656	CMSS1	100	72.556	Phascolarctos_cinereus
ENSMLUG00000001131	CMSS1	78	62.745	ENSPFOG00000016849	cmss1	70	62.376	Poecilia_formosa
ENSMLUG00000001131	CMSS1	78	62.255	ENSPLAG00000008323	cmss1	70	61.881	Poecilia_latipinna
ENSMLUG00000001131	CMSS1	78	62.745	ENSPMEG00000021020	cmss1	69	62.376	Poecilia_mexicana
ENSMLUG00000001131	CMSS1	90	58.025	ENSPREG00000007618	cmss1	68	61.881	Poecilia_reticulata
ENSMLUG00000001131	CMSS1	100	90.875	ENSPPYG00000013606	CMSS1	96	90.875	Pongo_abelii
ENSMLUG00000001131	CMSS1	99	91.154	ENSPCOG00000020035	CMSS1	99	91.154	Propithecus_coquereli
ENSMLUG00000001131	CMSS1	99	80.843	ENSPVAG00000017031	CMSS1	93	80.843	Pteropus_vampyrus
ENSMLUG00000001131	CMSS1	68	64.607	ENSPNYG00000013428	cmss1	79	56.881	Pundamilia_nyererei
ENSMLUG00000001131	CMSS1	99	48.057	ENSPNAG00000007912	cmss1	96	49.117	Pygocentrus_nattereri
ENSMLUG00000001131	CMSS1	99	83.969	ENSRNOG00000027888	Cmss1	100	83.969	Rattus_norvegicus
ENSMLUG00000001131	CMSS1	99	90.000	ENSRBIG00000037931	CMSS1	99	89.655	Rhinopithecus_bieti
ENSMLUG00000001131	CMSS1	99	90.000	ENSRROG00000042910	CMSS1	99	89.655	Rhinopithecus_roxellana
ENSMLUG00000001131	CMSS1	99	89.734	ENSSBOG00000030980	CMSS1	99	89.734	Saimiri_boliviensis_boliviensis
ENSMLUG00000001131	CMSS1	95	74.803	ENSSHAG00000009321	CMSS1	99	74.803	Sarcophilus_harrisii
ENSMLUG00000001131	CMSS1	87	61.638	ENSSFOG00015001509	cmss1	83	60.331	Scleropages_formosus
ENSMLUG00000001131	CMSS1	85	62.281	ENSSMAG00000001653	cmss1	69	63.366	Scophthalmus_maximus
ENSMLUG00000001131	CMSS1	88	59.829	ENSSDUG00000007719	cmss1	82	59.244	Seriola_dumerili
ENSMLUG00000001131	CMSS1	79	63.636	ENSSLDG00000012300	cmss1	95	50.862	Seriola_lalandi_dorsalis
ENSMLUG00000001131	CMSS1	99	74.615	ENSSARG00000003584	CMSS1	92	74.615	Sorex_araneus
ENSMLUG00000001131	CMSS1	87	69.737	ENSSPUG00000003865	CMSS1	100	69.737	Sphenodon_punctatus
ENSMLUG00000001131	CMSS1	79	63.636	ENSSPAG00000019182	cmss1	83	54.444	Stegastes_partitus
ENSMLUG00000001131	CMSS1	99	93.462	ENSSSCG00000011970	CMSS1	92	93.462	Sus_scrofa
ENSMLUG00000001131	CMSS1	88	65.801	ENSTGUG00000013635	CMSS1	100	65.801	Taeniopygia_guttata
ENSMLUG00000001131	CMSS1	78	60.784	ENSTRUG00000015265	cmss1	71	60.396	Takifugu_rubripes
ENSMLUG00000001131	CMSS1	78	55.882	ENSTNIG00000002880	cmss1	72	55.446	Tetraodon_nigroviridis
ENSMLUG00000001131	CMSS1	66	93.396	ENSTBEG00000016722	CMSS1	62	93.396	Tupaia_belangeri
ENSMLUG00000001131	CMSS1	99	88.846	ENSTTRG00000001562	CMSS1	92	88.846	Tursiops_truncatus
ENSMLUG00000001131	CMSS1	99	91.188	ENSUAMG00000024209	CMSS1	100	93.778	Ursus_americanus
ENSMLUG00000001131	CMSS1	99	90.769	ENSUMAG00000001983	CMSS1	99	90.385	Ursus_maritimus
ENSMLUG00000001131	CMSS1	87	75.217	ENSVPAG00000000263	CMSS1	82	75.217	Vicugna_pacos
ENSMLUG00000001131	CMSS1	94	91.935	ENSVVUG00000021647	-	100	91.935	Vulpes_vulpes
ENSMLUG00000001131	CMSS1	83	93.151	ENSVVUG00000007776	-	85	93.151	Vulpes_vulpes
ENSMLUG00000001131	CMSS1	89	59.916	ENSXETG00000011858	cmss1	83	59.916	Xenopus_tropicalis
ENSMLUG00000001131	CMSS1	80	62.381	ENSXCOG00000018724	cmss1	68	62.376	Xiphophorus_couchianus
ENSMLUG00000001131	CMSS1	80	62.381	ENSXMAG00000011243	cmss1	75	62.376	Xiphophorus_maculatus