EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000001576 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 1413 bases
Position: chrGL430169:47066-48478
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000001447	zf-C2H2	PF00096.26	5.4e-81	1	11
ENSMLUP00000001447	zf-C2H2	PF00096.26	5.4e-81	2	11
ENSMLUP00000001447	zf-C2H2	PF00096.26	5.4e-81	3	11
ENSMLUP00000001447	zf-C2H2	PF00096.26	5.4e-81	4	11
ENSMLUP00000001447	zf-C2H2	PF00096.26	5.4e-81	5	11
ENSMLUP00000001447	zf-C2H2	PF00096.26	5.4e-81	6	11
ENSMLUP00000001447	zf-C2H2	PF00096.26	5.4e-81	7	11
ENSMLUP00000001447	zf-C2H2	PF00096.26	5.4e-81	8	11
ENSMLUP00000001447	zf-C2H2	PF00096.26	5.4e-81	9	11
ENSMLUP00000001447	zf-C2H2	PF00096.26	5.4e-81	10	11
ENSMLUP00000001447	zf-C2H2	PF00096.26	5.4e-81	11	11
ENSMLUP00000001447	zf-met	PF12874.7	3.4e-16	1	5
ENSMLUP00000001447	zf-met	PF12874.7	3.4e-16	2	5
ENSMLUP00000001447	zf-met	PF12874.7	3.4e-16	3	5
ENSMLUP00000001447	zf-met	PF12874.7	3.4e-16	4	5
ENSMLUP00000001447	zf-met	PF12874.7	3.4e-16	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000001576	-	1248	-	ENSMLUP00000001447	416 (aa)	-	G1NVX4

Gene Model

Click here to download ENSMLUG00000001576's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000001576's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000001576	-	99	61.353	ENSMLUG00000013784	ZNF235	73	61.353
ENSMLUG00000001576	-	100	42.291	ENSMLUG00000003468	-	99	42.291
ENSMLUG00000001576	-	100	52.895	ENSMLUG00000011734	ZNF81	74	52.895
ENSMLUG00000001576	-	100	34.591	ENSMLUG00000014677	ZNF574	80	32.808
ENSMLUG00000001576	-	100	32.673	ENSMLUG00000002158	GTF3A	79	32.700
ENSMLUG00000001576	-	99	52.083	ENSMLUG00000006256	ZNF770	60	52.083
ENSMLUG00000001576	-	100	46.373	ENSMLUG00000012039	ZNF317	71	46.373
ENSMLUG00000001576	-	99	54.222	ENSMLUG00000000013	-	50	54.222
ENSMLUG00000001576	-	100	32.959	ENSMLUG00000006097	PRDM5	80	32.959
ENSMLUG00000001576	-	99	38.519	ENSMLUG00000001086	SNAI2	50	38.519
ENSMLUG00000001576	-	100	40.870	ENSMLUG00000011089	ZNF236	69	40.870
ENSMLUG00000001576	-	99	50.585	ENSMLUG00000002894	ZNF454	74	52.145
ENSMLUG00000001576	-	100	32.579	ENSMLUG00000009484	ZNF521	94	32.579
ENSMLUG00000001576	-	98	34.286	ENSMLUG00000009100	ZNF784	65	34.762
ENSMLUG00000001576	-	99	50.000	ENSMLUG00000007060	-	54	50.000
ENSMLUG00000001576	-	99	54.321	ENSMLUG00000002042	ZFP1	80	54.321
ENSMLUG00000001576	-	99	46.154	ENSMLUG00000010582	SALL3	59	50.000
ENSMLUG00000001576	-	100	48.611	ENSMLUG00000003693	-	85	48.611
ENSMLUG00000001576	-	99	55.039	ENSMLUG00000015757	-	97	51.910
ENSMLUG00000001576	-	99	40.708	ENSMLUG00000009878	ZNF423	94	40.708
ENSMLUG00000001576	-	99	51.795	ENSMLUG00000009276	-	87	51.795
ENSMLUG00000001576	-	99	43.182	ENSMLUG00000025202	ZBTB17	59	42.458
ENSMLUG00000001576	-	99	34.395	ENSMLUG00000004755	ZNF646	89	32.995
ENSMLUG00000001576	-	99	55.814	ENSMLUG00000004199	-	100	55.814
ENSMLUG00000001576	-	100	64.675	ENSMLUG00000014654	ZNF112	69	64.675

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000001576	-	100	64.426	ENSCHOG00000012657	ZNF227	75	63.221	Choloepus_hoffmanni
ENSMLUG00000001576	-	99	64.467	ENSRNOG00000032625	AC118165.1	100	64.467	Rattus_norvegicus