EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000002414 (Gene tree)
Gene ID: 102423648
Gene Symbol: TARBP1
Alias: TRM3|TRMT3|TRP-185
Full Name: TAR (HIV-1) RNA binding protein 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 31418 bases
Position: chrGL430345:301121-332538
Accession: 11568
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000002208	SpoU_methylase	PF00588.19	1.5e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000002430	TARBP1-201	4131	XM_006109876	ENSMLUP00000002208	1376 (aa)	-	G1NXU3

Gene Model

Click here to download ENSMLUG00000002414's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000002414's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000002414	TARBP1	99	75.145	ENSG00000059588	TARBP1	84	75.145	Homo_sapiens
ENSMLUG00000002414	TARBP1	99	43.892	ENSAPOG00000016419	si:dkey-85a20.4	84	43.892	Acanthochromis_polyacanthus
ENSMLUG00000002414	TARBP1	99	77.762	ENSAMEG00000003359	TARBP1	100	77.762	Ailuropoda_melanoleuca
ENSMLUG00000002414	TARBP1	99	44.181	ENSATEG00000020266	si:dkey-85a20.4	83	44.037	Anabas_testudineus
ENSMLUG00000002414	TARBP1	99	61.853	ENSAPLG00000007666	TARBP1	99	62.291	Anas_platyrhynchos
ENSMLUG00000002414	TARBP1	98	58.315	ENSACAG00000001142	TARBP1	84	58.019	Anolis_carolinensis
ENSMLUG00000002414	TARBP1	99	72.311	ENSANAG00000022031	TARBP1	87	72.311	Aotus_nancymaae
ENSMLUG00000002414	TARBP1	99	76.260	ENSBTAG00000004517	TARBP1	84	75.948	Bos_taurus
ENSMLUG00000002414	TARBP1	99	74.927	ENSCJAG00000018155	TARBP1	84	74.927	Callithrix_jacchus
ENSMLUG00000002414	TARBP1	100	77.012	ENSCAFG00000011533	TARBP1	97	77.108	Canis_familiaris
ENSMLUG00000002414	TARBP1	100	76.834	ENSCAFG00020027141	TARBP1	84	76.834	Canis_lupus_dingo
ENSMLUG00000002414	TARBP1	100	75.236	ENSCHIG00000011437	TARBP1	84	74.964	Capra_hircus
ENSMLUG00000002414	TARBP1	96	74.299	ENSTSYG00000010382	TARBP1	97	74.111	Carlito_syrichta
ENSMLUG00000002414	TARBP1	93	64.091	ENSCAPG00000010831	TARBP1	99	63.856	Cavia_aperea
ENSMLUG00000002414	TARBP1	99	72.064	ENSCPOG00000013995	TARBP1	85	71.845	Cavia_porcellus
ENSMLUG00000002414	TARBP1	99	74.927	ENSCCAG00000037278	TARBP1	84	74.927	Cebus_capucinus
ENSMLUG00000002414	TARBP1	99	74.637	ENSCATG00000011754	TARBP1	84	74.637	Cercocebus_atys
ENSMLUG00000002414	TARBP1	96	72.686	ENSCLAG00000003655	TARBP1	97	72.458	Chinchilla_lanigera
ENSMLUG00000002414	TARBP1	94	75.019	ENSCSAG00000010100	TARBP1	99	75.019	Chlorocebus_sabaeus
ENSMLUG00000002414	TARBP1	93	64.280	ENSCPBG00000005587	TARBP1	82	72.756	Chrysemys_picta_bellii
ENSMLUG00000002414	TARBP1	99	74.635	ENSCANG00000034343	TARBP1	99	74.635	Colobus_angolensis_palliatus
ENSMLUG00000002414	TARBP1	99	73.142	ENSCGRG00001016690	Tarbp1	85	72.263	Cricetulus_griseus_chok1gshd
ENSMLUG00000002414	TARBP1	99	73.142	ENSCGRG00000016893	Tarbp1	92	72.263	Cricetulus_griseus_crigri
ENSMLUG00000002414	TARBP1	99	41.194	ENSCSEG00000005255	si:dkey-85a20.4	84	44.203	Cynoglossus_semilaevis
ENSMLUG00000002414	TARBP1	99	44.582	ENSDARG00000079055	si:dkey-85a20.4	99	51.034	Danio_rerio
ENSMLUG00000002414	TARBP1	99	75.346	ENSDNOG00000008637	TARBP1	83	75.237	Dasypus_novemcinctus
ENSMLUG00000002414	TARBP1	95	71.012	ENSDORG00000007984	Tarbp1	100	70.620	Dipodomys_ordii
ENSMLUG00000002414	TARBP1	100	77.737	ENSEASG00005000252	TARBP1	85	77.012	Equus_asinus_asinus
ENSMLUG00000002414	TARBP1	100	77.230	ENSECAG00000023673	TARBP1	83	80.645	Equus_caballus
ENSMLUG00000002414	TARBP1	98	44.405	ENSELUG00000012193	si:dkey-85a20.4	84	44.548	Esox_lucius
ENSMLUG00000002414	TARBP1	100	74.673	ENSFCAG00000014183	TARBP1	84	74.673	Felis_catus
ENSMLUG00000002414	TARBP1	95	62.938	ENSFALG00000013565	TARBP1	100	62.538	Ficedula_albicollis
ENSMLUG00000002414	TARBP1	94	69.225	ENSFDAG00000001308	TARBP1	99	69.073	Fukomys_damarensis
ENSMLUG00000002414	TARBP1	97	48.187	ENSFHEG00000007565	si:dkey-85a20.4	83	48.187	Fundulus_heteroclitus
ENSMLUG00000002414	TARBP1	99	43.218	ENSGMOG00000004549	si:dkey-85a20.4	98	43.218	Gadus_morhua
ENSMLUG00000002414	TARBP1	95	65.839	ENSGALG00000011000	TARBP1	85	65.839	Gallus_gallus
ENSMLUG00000002414	TARBP1	99	43.664	ENSGAFG00000007387	si:dkey-85a20.4	83	43.519	Gambusia_affinis
ENSMLUG00000002414	TARBP1	99	43.214	ENSGACG00000005865	si:dkey-85a20.4	96	43.092	Gasterosteus_aculeatus
ENSMLUG00000002414	TARBP1	99	65.189	ENSGAGG00000012102	TARBP1	87	65.189	Gopherus_agassizii
ENSMLUG00000002414	TARBP1	99	72.589	ENSGGOG00000022879	TARBP1	99	72.589	Gorilla_gorilla
ENSMLUG00000002414	TARBP1	99	44.838	ENSHBUG00000008877	si:dkey-85a20.4	83	44.838	Haplochromis_burtoni
ENSMLUG00000002414	TARBP1	99	71.939	ENSHGLG00000011592	TARBP1	85	71.720	Heterocephalus_glaber_female
ENSMLUG00000002414	TARBP1	99	71.761	ENSHGLG00100015169	TARBP1	94	71.377	Heterocephalus_glaber_male
ENSMLUG00000002414	TARBP1	98	42.743	ENSIPUG00000005249	si:dkey-85a20.4	82	42.638	Ictalurus_punctatus
ENSMLUG00000002414	TARBP1	99	70.882	ENSSTOG00000032291	TARBP1	97	70.977	Ictidomys_tridecemlineatus
ENSMLUG00000002414	TARBP1	99	69.505	ENSJJAG00000017840	Tarbp1	94	69.315	Jaculus_jaculus
ENSMLUG00000002414	TARBP1	74	47.331	ENSKMAG00000017546	si:dkey-85a20.4	79	47.331	Kryptolebias_marmoratus
ENSMLUG00000002414	TARBP1	77	47.779	ENSLBEG00000012132	si:dkey-85a20.4	79	47.791	Labrus_bergylta
ENSMLUG00000002414	TARBP1	99	51.852	ENSLACG00000004337	TARBP1	83	51.672	Latimeria_chalumnae
ENSMLUG00000002414	TARBP1	99	48.876	ENSLOCG00000016214	si:dkey-85a20.4	84	48.660	Lepisosteus_oculatus
ENSMLUG00000002414	TARBP1	99	74.762	ENSLAFG00000011394	TARBP1	86	74.396	Loxodonta_africana
ENSMLUG00000002414	TARBP1	99	71.895	ENSMFAG00000041068	TARBP1	85	71.895	Macaca_fascicularis
ENSMLUG00000002414	TARBP1	99	71.895	ENSMMUG00000021703	TARBP1	84	71.895	Macaca_mulatta
ENSMLUG00000002414	TARBP1	99	74.419	ENSMNEG00000045002	TARBP1	84	74.419	Macaca_nemestrina
ENSMLUG00000002414	TARBP1	99	74.688	ENSMLEG00000044182	TARBP1	99	74.688	Mandrillus_leucophaeus
ENSMLUG00000002414	TARBP1	99	44.139	ENSMAMG00000021760	si:dkey-85a20.4	84	44.067	Mastacembelus_armatus
ENSMLUG00000002414	TARBP1	99	44.877	ENSMZEG00005005751	si:dkey-85a20.4	83	44.949	Maylandia_zebra
ENSMLUG00000002414	TARBP1	99	72.185	ENSMAUG00000020968	Tarbp1	85	71.838	Mesocricetus_auratus
ENSMLUG00000002414	TARBP1	99	66.860	ENSMICG00000015280	TARBP1	83	66.258	Microcebus_murinus
ENSMLUG00000002414	TARBP1	99	71.838	ENSMOCG00000004128	Tarbp1	85	71.565	Microtus_ochrogaster
ENSMLUG00000002414	TARBP1	98	43.065	ENSMMOG00000007795	si:dkey-85a20.4	83	43.220	Mola_mola
ENSMLUG00000002414	TARBP1	99	68.149	ENSMODG00000008504	TARBP1	82	67.686	Monodelphis_domestica
ENSMLUG00000002414	TARBP1	99	43.198	ENSMALG00000002916	si:dkey-85a20.4	84	43.415	Monopterus_albus
ENSMLUG00000002414	TARBP1	99	70.888	MGP_CAROLIEiJ_G0031729	Tarbp1	79	78.764	Mus_caroli
ENSMLUG00000002414	TARBP1	99	71.293	ENSMUSG00000090290	Tarbp1	86	71.083	Mus_musculus
ENSMLUG00000002414	TARBP1	99	71.201	MGP_PahariEiJ_G0023326	Tarbp1	87	71.201	Mus_pahari
ENSMLUG00000002414	TARBP1	99	71.074	MGP_SPRETEiJ_G0032846	Tarbp1	86	70.864	Mus_spretus
ENSMLUG00000002414	TARBP1	91	76.856	ENSMPUG00000002802	TARBP1	100	76.653	Mustela_putorius_furo
ENSMLUG00000002414	TARBP1	99	75.291	ENSNLEG00000002518	TARBP1	84	75.291	Nomascus_leucogenys
ENSMLUG00000002414	TARBP1	60	69.892	ENSMEUG00000011370	-	51	69.892	Notamacropus_eugenii
ENSMLUG00000002414	TARBP1	80	76.898	ENSOPRG00000013822	TARBP1	68	76.898	Ochotona_princeps
ENSMLUG00000002414	TARBP1	99	71.939	ENSODEG00000005238	TARBP1	88	71.741	Octodon_degus
ENSMLUG00000002414	TARBP1	99	44.452	ENSONIG00000009789	si:dkey-85a20.4	97	44.452	Oreochromis_niloticus
ENSMLUG00000002414	TARBP1	99	74.691	ENSOCUG00000017418	TARBP1	84	74.400	Oryctolagus_cuniculus
ENSMLUG00000002414	TARBP1	99	41.397	ENSORLG00000010529	si:dkey-85a20.4	83	41.541	Oryzias_latipes
ENSMLUG00000002414	TARBP1	99	42.049	ENSORLG00020019264	si:dkey-85a20.4	83	42.151	Oryzias_latipes_hni
ENSMLUG00000002414	TARBP1	99	41.869	ENSORLG00015003276	si:dkey-85a20.4	83	42.011	Oryzias_latipes_hsok
ENSMLUG00000002414	TARBP1	99	72.311	ENSOGAG00000002379	TARBP1	84	72.093	Otolemur_garnettii
ENSMLUG00000002414	TARBP1	100	75.381	ENSOARG00000003434	TARBP1	91	75.109	Ovis_aries
ENSMLUG00000002414	TARBP1	99	75.565	ENSPPAG00000028097	TARBP1	99	75.565	Pan_paniscus
ENSMLUG00000002414	TARBP1	100	74.800	ENSPPRG00000013561	TARBP1	88	74.800	Panthera_pardus
ENSMLUG00000002414	TARBP1	98	77.293	ENSPTIG00000009281	TARBP1	100	77.293	Panthera_tigris_altaica
ENSMLUG00000002414	TARBP1	99	75.581	ENSPTRG00000002124	TARBP1	84	75.581	Pan_troglodytes
ENSMLUG00000002414	TARBP1	99	74.637	ENSPANG00000021933	TARBP1	84	74.637	Papio_anubis
ENSMLUG00000002414	TARBP1	99	46.720	ENSPKIG00000016716	si:dkey-85a20.4	82	46.575	Paramormyrops_kingsleyae
ENSMLUG00000002414	TARBP1	94	63.482	ENSPSIG00000010699	TARBP1	99	63.251	Pelodiscus_sinensis
ENSMLUG00000002414	TARBP1	99	72.920	ENSPEMG00000006888	Tarbp1	91	72.760	Peromyscus_maniculatus_bairdii
ENSMLUG00000002414	TARBP1	90	78.218	ENSPCIG00000029710	TARBP1	81	78.218	Phascolarctos_cinereus
ENSMLUG00000002414	TARBP1	99	43.257	ENSPFOG00000013020	si:dkey-85a20.4	97	43.257	Poecilia_formosa
ENSMLUG00000002414	TARBP1	99	43.746	ENSPLAG00000006044	si:dkey-85a20.4	83	43.603	Poecilia_latipinna
ENSMLUG00000002414	TARBP1	99	43.674	ENSPMEG00000017857	si:dkey-85a20.4	83	43.531	Poecilia_mexicana
ENSMLUG00000002414	TARBP1	99	43.925	ENSPREG00000022753	si:dkey-85a20.4	83	43.781	Poecilia_reticulata
ENSMLUG00000002414	TARBP1	89	76.316	ENSPPYG00000000102	TARBP1	83	76.316	Pongo_abelii
ENSMLUG00000002414	TARBP1	86	66.667	ENSPCAG00000004808	TARBP1	73	66.021	Procavia_capensis
ENSMLUG00000002414	TARBP1	99	71.948	ENSPCOG00000005666	TARBP1	84	71.676	Propithecus_coquereli
ENSMLUG00000002414	TARBP1	99	66.158	ENSPVAG00000014798	TARBP1	85	66.013	Pteropus_vampyrus
ENSMLUG00000002414	TARBP1	99	43.954	ENSPNYG00000019135	si:dkey-85a20.4	83	43.927	Pundamilia_nyererei
ENSMLUG00000002414	TARBP1	99	67.326	ENSRNOG00000053574	Tarbp1	86	66.497	Rattus_norvegicus
ENSMLUG00000002414	TARBP1	99	69.622	ENSRBIG00000043362	TARBP1	93	69.622	Rhinopithecus_bieti
ENSMLUG00000002414	TARBP1	99	74.273	ENSRROG00000029527	TARBP1	88	74.273	Rhinopithecus_roxellana
ENSMLUG00000002414	TARBP1	98	75.111	ENSSBOG00000034503	TARBP1	96	75.111	Saimiri_boliviensis_boliviensis
ENSMLUG00000002414	TARBP1	98	68.112	ENSSHAG00000000013	TARBP1	99	68.112	Sarcophilus_harrisii
ENSMLUG00000002414	TARBP1	99	44.245	ENSSFOG00015002660	si:dkey-85a20.4	99	44.509	Scleropages_formosus
ENSMLUG00000002414	TARBP1	99	44.684	ENSSMAG00000007081	si:dkey-85a20.4	82	44.682	Scophthalmus_maximus
ENSMLUG00000002414	TARBP1	99	42.713	ENSSDUG00000023566	si:dkey-85a20.4	84	42.898	Seriola_dumerili
ENSMLUG00000002414	TARBP1	99	44.986	ENSSLDG00000020200	si:dkey-85a20.4	84	45.025	Seriola_lalandi_dorsalis
ENSMLUG00000002414	TARBP1	90	76.512	ENSSARG00000012207	TARBP1	76	76.512	Sorex_araneus
ENSMLUG00000002414	TARBP1	99	62.336	ENSSPUG00000015364	TARBP1	84	62.336	Sphenodon_punctatus
ENSMLUG00000002414	TARBP1	99	44.009	ENSSPAG00000007213	si:dkey-85a20.4	84	43.866	Stegastes_partitus
ENSMLUG00000002414	TARBP1	95	80.874	ENSSSCG00000010160	TARBP1	83	81.319	Sus_scrofa
ENSMLUG00000002414	TARBP1	95	62.890	ENSTGUG00000010214	TARBP1	99	62.662	Taeniopygia_guttata
ENSMLUG00000002414	TARBP1	99	42.743	ENSTNIG00000016586	si:dkey-85a20.4	99	42.816	Tetraodon_nigroviridis
ENSMLUG00000002414	TARBP1	94	72.560	ENSTTRG00000008707	TARBP1	83	72.650	Tursiops_truncatus
ENSMLUG00000002414	TARBP1	97	77.769	ENSUMAG00000006730	TARBP1	99	77.769	Ursus_maritimus
ENSMLUG00000002414	TARBP1	77	81.443	ENSVPAG00000007665	TARBP1	74	81.443	Vicugna_pacos
ENSMLUG00000002414	TARBP1	100	76.834	ENSVVUG00000007460	TARBP1	100	73.852	Vulpes_vulpes
ENSMLUG00000002414	TARBP1	99	52.161	ENSXETG00000016224	tarbp1	99	52.161	Xenopus_tropicalis
ENSMLUG00000002414	TARBP1	89	46.794	ENSXCOG00000011779	si:dkey-85a20.4	90	46.794	Xiphophorus_couchianus
ENSMLUG00000002414	TARBP1	77	41.574	ENSXMAG00000009600	si:dkey-85a20.4	100	41.389	Xiphophorus_maculatus