EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000002488 (Gene tree)
Gene ID: 102438164
Gene Symbol: SNRPC
Alias: U1-C|Yhc1
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 16240 bases
Position: chrGL430363:176699-192938
Accession: 102438164
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000002261	zf-U1	PF06220.12	5.3e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000002488	SNRPC-201	480	XM_006104715	ENSMLUP00000002261	159 (aa)	XP_006104777	G1NXZ0

Gene Model

Click here to download ENSMLUG00000002488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000002488's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000002488	SNRPC	100	99.371	ENSG00000124562	SNRPC	100	100.000	Homo_sapiens
ENSMLUG00000002488	SNRPC	100	100.000	ENSAMEG00000000963	SNRPC	88	100.000	Ailuropoda_melanoleuca
ENSMLUG00000002488	SNRPC	100	96.855	ENSACAG00000015721	SNRPC	88	96.855	Anolis_carolinensis
ENSMLUG00000002488	SNRPC	99	75.159	ENSANAG00000021444	-	61	80.208	Aotus_nancymaae
ENSMLUG00000002488	SNRPC	99	91.720	ENSANAG00000020588	-	91	92.308	Aotus_nancymaae
ENSMLUG00000002488	SNRPC	100	99.371	ENSANAG00000019696	-	100	98.113	Aotus_nancymaae
ENSMLUG00000002488	SNRPC	99	86.624	ENSANAG00000021026	-	100	78.616	Aotus_nancymaae
ENSMLUG00000002488	SNRPC	100	97.484	ENSANAG00000007843	-	100	97.484	Aotus_nancymaae
ENSMLUG00000002488	SNRPC	99	88.535	ENSANAG00000019726	-	92	88.050	Aotus_nancymaae
ENSMLUG00000002488	SNRPC	99	94.904	ENSANAG00000019157	-	100	93.711	Aotus_nancymaae
ENSMLUG00000002488	SNRPC	99	84.076	ENSAMXG00000032641	snrpc	100	71.069	Astyanax_mexicanus
ENSMLUG00000002488	SNRPC	100	98.113	ENSBTAG00000024549	SNRPC	100	98.113	Bos_taurus
ENSMLUG00000002488	SNRPC	99	96.815	ENSCJAG00000041822	-	100	95.597	Callithrix_jacchus
ENSMLUG00000002488	SNRPC	100	99.371	ENSCJAG00000015321	-	100	98.113	Callithrix_jacchus
ENSMLUG00000002488	SNRPC	99	98.089	ENSCJAG00000043055	-	99	98.089	Callithrix_jacchus
ENSMLUG00000002488	SNRPC	99	77.707	ENSCAFG00000025525	-	100	76.730	Canis_familiaris
ENSMLUG00000002488	SNRPC	73	99.138	ENSCAFG00000001231	-	91	99.138	Canis_familiaris
ENSMLUG00000002488	SNRPC	100	95.625	ENSCAFG00000028988	-	100	95.625	Canis_familiaris
ENSMLUG00000002488	SNRPC	99	94.904	ENSCAFG00000031775	-	100	93.711	Canis_familiaris
ENSMLUG00000002488	SNRPC	99	94.904	ENSCAFG00020017383	-	100	93.711	Canis_lupus_dingo
ENSMLUG00000002488	SNRPC	99	77.841	ENSCAFG00020026577	-	100	83.146	Canis_lupus_dingo
ENSMLUG00000002488	SNRPC	100	94.969	ENSCAFG00020005758	-	100	94.969	Canis_lupus_dingo
ENSMLUG00000002488	SNRPC	100	86.792	ENSCAFG00020009944	-	90	87.898	Canis_lupus_dingo
ENSMLUG00000002488	SNRPC	100	98.113	ENSCAFG00020005945	-	100	98.113	Canis_lupus_dingo
ENSMLUG00000002488	SNRPC	99	71.975	ENSCHIG00000005039	-	100	69.811	Capra_hircus
ENSMLUG00000002488	SNRPC	100	97.484	ENSCHIG00000012087	-	100	97.484	Capra_hircus
ENSMLUG00000002488	SNRPC	99	82.166	ENSTSYG00000025721	-	100	74.214	Carlito_syrichta
ENSMLUG00000002488	SNRPC	98	88.462	ENSTSYG00000029745	-	62	91.870	Carlito_syrichta
ENSMLUG00000002488	SNRPC	100	98.113	ENSTSYG00000011216	-	100	98.113	Carlito_syrichta
ENSMLUG00000002488	SNRPC	89	100.000	ENSCAPG00000005161	SNRPC	100	100.000	Cavia_aperea
ENSMLUG00000002488	SNRPC	100	98.113	ENSCPOG00000008563	SNRPC	100	98.113	Cavia_porcellus
ENSMLUG00000002488	SNRPC	99	68.790	ENSCCAG00000028293	-	63	86.585	Cebus_capucinus
ENSMLUG00000002488	SNRPC	98	80.128	ENSCCAG00000022209	-	95	80.128	Cebus_capucinus
ENSMLUG00000002488	SNRPC	97	80.645	ENSCCAG00000026624	-	66	73.885	Cebus_capucinus
ENSMLUG00000002488	SNRPC	100	90.566	ENSCCAG00000022751	-	97	90.566	Cebus_capucinus
ENSMLUG00000002488	SNRPC	99	93.631	ENSCCAG00000036059	-	89	92.453	Cebus_capucinus
ENSMLUG00000002488	SNRPC	100	99.371	ENSCATG00000035787	SNRPC	100	98.113	Cercocebus_atys
ENSMLUG00000002488	SNRPC	100	98.113	ENSCLAG00000016920	SNRPC	100	98.113	Chinchilla_lanigera
ENSMLUG00000002488	SNRPC	98	82.051	ENSCLAG00000010242	-	96	82.051	Chinchilla_lanigera
ENSMLUG00000002488	SNRPC	99	78.409	ENSCSAG00000009821	SNRPC	100	83.708	Chlorocebus_sabaeus
ENSMLUG00000002488	SNRPC	100	83.019	ENSCHOG00000011439	SNRPC	89	83.019	Choloepus_hoffmanni
ENSMLUG00000002488	SNRPC	99	96.815	ENSCPBG00000027142	SNRPC	100	95.597	Chrysemys_picta_bellii
ENSMLUG00000002488	SNRPC	96	48.026	ENSCING00000021229	ci-zf(matrin)-4	51	80.645	Ciona_intestinalis
ENSMLUG00000002488	SNRPC	100	98.113	ENSCANG00000028035	SNRPC	100	98.113	Colobus_angolensis_palliatus
ENSMLUG00000002488	SNRPC	99	86.624	ENSCGRG00001021483	-	100	83.648	Cricetulus_griseus_chok1gshd
ENSMLUG00000002488	SNRPC	100	97.484	ENSCGRG00001009011	-	100	97.484	Cricetulus_griseus_chok1gshd
ENSMLUG00000002488	SNRPC	100	98.742	ENSCGRG00000005005	Snrpc	100	98.742	Cricetulus_griseus_crigri
ENSMLUG00000002488	SNRPC	99	84.076	ENSDARG00000009871	snrpc	100	83.019	Danio_rerio
ENSMLUG00000002488	SNRPC	100	96.855	ENSDNOG00000034699	-	99	96.855	Dasypus_novemcinctus
ENSMLUG00000002488	SNRPC	74	98.291	ENSDNOG00000042403	-	93	98.291	Dasypus_novemcinctus
ENSMLUG00000002488	SNRPC	100	83.019	ENSDORG00000005955	Snrpc	67	81.132	Dipodomys_ordii
ENSMLUG00000002488	SNRPC	94	78.523	ENSDORG00000029823	-	56	92.208	Dipodomys_ordii
ENSMLUG00000002488	SNRPC	97	91.558	ENSETEG00000011265	-	100	90.385	Echinops_telfairi
ENSMLUG00000002488	SNRPC	52	98.795	ENSETEG00000008756	-	81	98.795	Echinops_telfairi
ENSMLUG00000002488	SNRPC	97	95.455	ENSETEG00000008268	-	100	94.231	Echinops_telfairi
ENSMLUG00000002488	SNRPC	100	98.113	ENSEASG00005021007	SNRPC	100	98.113	Equus_asinus_asinus
ENSMLUG00000002488	SNRPC	100	98.113	ENSECAG00000026848	SNRPC	100	98.113	Equus_caballus
ENSMLUG00000002488	SNRPC	99	80.255	ENSEEUG00000014633	SNRPC	90	79.747	Erinaceus_europaeus
ENSMLUG00000002488	SNRPC	99	77.848	ENSELUG00000000815	SNRPC	50	91.026	Esox_lucius
ENSMLUG00000002488	SNRPC	100	100.000	ENSFCAG00000044077	-	100	98.113	Felis_catus
ENSMLUG00000002488	SNRPC	99	92.357	ENSFCAG00000031775	-	72	96.748	Felis_catus
ENSMLUG00000002488	SNRPC	100	96.855	ENSFALG00000003756	SNRPC	100	96.855	Ficedula_albicollis
ENSMLUG00000002488	SNRPC	100	98.113	ENSFDAG00000018111	SNRPC	100	98.113	Fukomys_damarensis
ENSMLUG00000002488	SNRPC	99	96.203	ENSGALG00000002773	SNRPC	100	95.000	Gallus_gallus
ENSMLUG00000002488	SNRPC	99	96.815	ENSGAGG00000003063	SNRPC	100	95.597	Gopherus_agassizii
ENSMLUG00000002488	SNRPC	100	98.113	ENSGGOG00000012499	SNRPC	100	98.113	Gorilla_gorilla
ENSMLUG00000002488	SNRPC	80	74.803	ENSHGLG00000005871	-	100	74.214	Heterocephalus_glaber_female
ENSMLUG00000002488	SNRPC	99	80.255	ENSHGLG00000017741	-	100	76.730	Heterocephalus_glaber_female
ENSMLUG00000002488	SNRPC	100	98.113	ENSHGLG00000013981	SNRPC	99	100.000	Heterocephalus_glaber_female
ENSMLUG00000002488	SNRPC	100	98.113	ENSHGLG00100009478	SNRPC	99	100.000	Heterocephalus_glaber_male
ENSMLUG00000002488	SNRPC	99	94.268	ENSHGLG00100017764	-	100	93.082	Heterocephalus_glaber_male
ENSMLUG00000002488	SNRPC	99	80.255	ENSHGLG00100010786	-	100	76.730	Heterocephalus_glaber_male
ENSMLUG00000002488	SNRPC	99	84.713	ENSIPUG00000024851	snrpc	100	83.648	Ictalurus_punctatus
ENSMLUG00000002488	SNRPC	100	98.113	ENSSTOG00000013786	SNRPC	100	98.113	Ictidomys_tridecemlineatus
ENSMLUG00000002488	SNRPC	100	97.484	ENSJJAG00000021741	Snrpc	100	97.484	Jaculus_jaculus
ENSMLUG00000002488	SNRPC	100	89.375	ENSLACG00000013753	SNRPC	89	91.250	Latimeria_chalumnae
ENSMLUG00000002488	SNRPC	100	98.113	ENSLAFG00000013534	SNRPC	100	98.113	Loxodonta_africana
ENSMLUG00000002488	SNRPC	100	98.113	ENSMFAG00000031764	-	100	98.113	Macaca_fascicularis
ENSMLUG00000002488	SNRPC	100	97.484	ENSMFAG00000030525	-	100	97.484	Macaca_fascicularis
ENSMLUG00000002488	SNRPC	100	96.855	ENSMMUG00000039415	-	100	96.855	Macaca_mulatta
ENSMLUG00000002488	SNRPC	99	89.172	ENSMMUG00000045425	-	100	88.050	Macaca_mulatta
ENSMLUG00000002488	SNRPC	100	98.113	ENSMMUG00000000869	-	97	98.113	Macaca_mulatta
ENSMLUG00000002488	SNRPC	100	99.371	ENSMNEG00000032731	SNRPC	100	98.113	Macaca_nemestrina
ENSMLUG00000002488	SNRPC	97	90.968	ENSMLEG00000040224	-	89	90.968	Mandrillus_leucophaeus
ENSMLUG00000002488	SNRPC	100	99.371	ENSMLEG00000033916	-	100	98.113	Mandrillus_leucophaeus
ENSMLUG00000002488	SNRPC	98	96.795	ENSMGAG00000006054	SNRPC	100	94.969	Meleagris_gallopavo
ENSMLUG00000002488	SNRPC	100	97.484	ENSMICG00000032183	-	100	97.484	Microcebus_murinus
ENSMLUG00000002488	SNRPC	99	87.261	ENSMICG00000009130	-	100	86.792	Microcebus_murinus
ENSMLUG00000002488	SNRPC	100	85.535	ENSMICG00000036552	-	88	79.245	Microcebus_murinus
ENSMLUG00000002488	SNRPC	100	99.371	ENSMICG00000007339	-	99	98.726	Microcebus_murinus
ENSMLUG00000002488	SNRPC	100	97.484	ENSMOCG00000017609	Snrpc	100	97.484	Microtus_ochrogaster
ENSMLUG00000002488	SNRPC	100	96.855	ENSMODG00000013904	-	100	96.855	Monodelphis_domestica
ENSMLUG00000002488	SNRPC	99	65.605	ENSMALG00000001197	snrpc	100	65.244	Monopterus_albus
ENSMLUG00000002488	SNRPC	100	97.484	MGP_CAROLIEiJ_G0021308	Snrpc	100	97.484	Mus_caroli
ENSMLUG00000002488	SNRPC	100	97.484	ENSMUSG00000024217	Snrpc	100	97.484	Mus_musculus
ENSMLUG00000002488	SNRPC	73	98.276	MGP_SPRETEiJ_G0022221	-	97	98.276	Mus_spretus
ENSMLUG00000002488	SNRPC	100	100.000	ENSMPUG00000003210	SNRPC	100	100.000	Mustela_putorius_furo
ENSMLUG00000002488	SNRPC	100	97.484	ENSNGAG00000019686	Snrpc	100	97.484	Nannospalax_galili
ENSMLUG00000002488	SNRPC	100	99.371	ENSNLEG00000034810	SNRPC	100	98.113	Nomascus_leucogenys
ENSMLUG00000002488	SNRPC	89	99.296	ENSMEUG00000009300	SNRPC	100	99.296	Notamacropus_eugenii
ENSMLUG00000002488	SNRPC	76	93.388	ENSODEG00000006008	-	88	91.870	Octodon_degus
ENSMLUG00000002488	SNRPC	100	96.855	ENSODEG00000019633	-	100	96.855	Octodon_degus
ENSMLUG00000002488	SNRPC	100	98.113	ENSODEG00000017080	-	100	98.113	Octodon_degus
ENSMLUG00000002488	SNRPC	100	97.484	ENSODEG00000020201	-	100	97.484	Octodon_degus
ENSMLUG00000002488	SNRPC	100	98.113	ENSODEG00000018985	-	100	98.113	Octodon_degus
ENSMLUG00000002488	SNRPC	100	98.113	ENSODEG00000020370	-	100	98.113	Octodon_degus
ENSMLUG00000002488	SNRPC	91	95.270	ENSOANG00000003405	SNRPC	100	95.270	Ornithorhynchus_anatinus
ENSMLUG00000002488	SNRPC	100	98.113	ENSOCUG00000026668	-	100	98.113	Oryctolagus_cuniculus
ENSMLUG00000002488	SNRPC	99	96.815	ENSOCUG00000023292	-	100	95.597	Oryctolagus_cuniculus
ENSMLUG00000002488	SNRPC	99	98.089	ENSOCUG00000026430	-	98	98.089	Oryctolagus_cuniculus
ENSMLUG00000002488	SNRPC	100	98.742	ENSOGAG00000008755	-	89	98.742	Otolemur_garnettii
ENSMLUG00000002488	SNRPC	96	83.660	ENSOGAG00000028405	-	99	80.519	Otolemur_garnettii
ENSMLUG00000002488	SNRPC	99	97.452	ENSOGAG00000026269	-	99	97.452	Otolemur_garnettii
ENSMLUG00000002488	SNRPC	100	98.113	ENSOARG00000010823	SNRPC	100	98.113	Ovis_aries
ENSMLUG00000002488	SNRPC	100	98.113	ENSPPAG00000043871	SNRPC	100	98.113	Pan_paniscus
ENSMLUG00000002488	SNRPC	100	100.000	ENSPPRG00000008647	-	100	98.113	Panthera_pardus
ENSMLUG00000002488	SNRPC	97	60.000	ENSPPRG00000016017	-	89	54.717	Panthera_pardus
ENSMLUG00000002488	SNRPC	100	100.000	ENSPTIG00000021867	-	100	98.113	Panthera_tigris_altaica
ENSMLUG00000002488	SNRPC	96	58.824	ENSPTIG00000013329	-	50	79.221	Panthera_tigris_altaica
ENSMLUG00000002488	SNRPC	100	98.113	ENSPTRG00000018070	SNRPC	100	98.113	Pan_troglodytes
ENSMLUG00000002488	SNRPC	100	99.371	ENSPANG00000022802	-	100	98.113	Papio_anubis
ENSMLUG00000002488	SNRPC	99	87.898	ENSPANG00000018228	-	94	86.792	Papio_anubis
ENSMLUG00000002488	SNRPC	58	85.870	ENSPKIG00000003136	snrpc	50	88.462	Paramormyrops_kingsleyae
ENSMLUG00000002488	SNRPC	99	96.815	ENSPSIG00000004876	SNRPC	77	96.815	Pelodiscus_sinensis
ENSMLUG00000002488	SNRPC	99	86.624	ENSPEMG00000002763	-	100	83.648	Peromyscus_maniculatus_bairdii
ENSMLUG00000002488	SNRPC	100	97.484	ENSPEMG00000010773	Snrpc	100	97.484	Peromyscus_maniculatus_bairdii
ENSMLUG00000002488	SNRPC	51	98.765	ENSPPYG00000029902	-	82	98.765	Pongo_abelii
ENSMLUG00000002488	SNRPC	100	99.371	ENSPCAG00000016885	SNRPC	91	99.371	Procavia_capensis
ENSMLUG00000002488	SNRPC	100	99.371	ENSPCOG00000004904	SNRPC	100	98.113	Propithecus_coquereli
ENSMLUG00000002488	SNRPC	100	98.742	ENSPVAG00000015597	SNRPC	88	98.742	Pteropus_vampyrus
ENSMLUG00000002488	SNRPC	100	97.484	ENSRNOG00000000493	Snrpc	100	97.484	Rattus_norvegicus
ENSMLUG00000002488	SNRPC	100	97.484	ENSRBIG00000014819	-	100	97.484	Rhinopithecus_bieti
ENSMLUG00000002488	SNRPC	100	99.371	ENSRBIG00000037567	-	100	98.113	Rhinopithecus_bieti
ENSMLUG00000002488	SNRPC	100	97.484	ENSRBIG00000022998	-	100	97.484	Rhinopithecus_bieti
ENSMLUG00000002488	SNRPC	97	90.323	ENSRBIG00000036353	-	83	88.050	Rhinopithecus_bieti
ENSMLUG00000002488	SNRPC	100	99.371	ENSRROG00000041300	SNRPC	100	98.113	Rhinopithecus_roxellana
ENSMLUG00000002488	SNRPC	98	81.410	ENSSBOG00000032882	-	93	81.410	Saimiri_boliviensis_boliviensis
ENSMLUG00000002488	SNRPC	97	81.818	ENSSBOG00000023189	-	91	80.769	Saimiri_boliviensis_boliviensis
ENSMLUG00000002488	SNRPC	100	99.371	ENSSBOG00000031528	-	100	98.113	Saimiri_boliviensis_boliviensis
ENSMLUG00000002488	SNRPC	93	83.108	ENSSBOG00000032361	-	66	79.167	Saimiri_boliviensis_boliviensis
ENSMLUG00000002488	SNRPC	99	99.363	ENSSHAG00000000945	-	87	99.363	Sarcophilus_harrisii
ENSMLUG00000002488	SNRPC	99	80.255	ENSSFOG00015019150	snrpc	100	79.245	Scleropages_formosus
ENSMLUG00000002488	SNRPC	100	76.730	ENSSARG00000008970	SNRPC	89	76.730	Sorex_araneus
ENSMLUG00000002488	SNRPC	100	96.226	ENSSPUG00000002502	SNRPC	100	96.226	Sphenodon_punctatus
ENSMLUG00000002488	SNRPC	100	98.113	ENSSSCG00000001531	SNRPC	100	98.113	Sus_scrofa
ENSMLUG00000002488	SNRPC	99	98.726	ENSTGUG00000001773	SNRPC	99	98.726	Taeniopygia_guttata
ENSMLUG00000002488	SNRPC	89	72.535	ENSTBEG00000016759	-	79	72.535	Tupaia_belangeri
ENSMLUG00000002488	SNRPC	97	72.727	ENSTBEG00000015356	-	68	88.542	Tupaia_belangeri
ENSMLUG00000002488	SNRPC	97	91.558	ENSTBEG00000013022	-	100	90.385	Tupaia_belangeri
ENSMLUG00000002488	SNRPC	100	100.000	ENSTTRG00000007827	SNRPC	87	100.000	Tursiops_truncatus
ENSMLUG00000002488	SNRPC	74	98.291	ENSUAMG00000014125	SNRPC	79	98.291	Ursus_americanus
ENSMLUG00000002488	SNRPC	99	88.636	ENSUMAG00000010869	SNRPC	99	88.636	Ursus_maritimus
ENSMLUG00000002488	SNRPC	89	74.648	ENSVPAG00000003106	SNRPC	79	74.648	Vicugna_pacos
ENSMLUG00000002488	SNRPC	100	96.855	ENSVVUG00000021947	-	100	96.855	Vulpes_vulpes
ENSMLUG00000002488	SNRPC	97	94.805	ENSVVUG00000010467	-	87	94.872	Vulpes_vulpes
ENSMLUG00000002488	SNRPC	99	89.172	ENSXETG00000024721	snrpc	100	88.050	Xenopus_tropicalis