EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000002701 (Gene tree)
Gene ID: 102442943
Gene Symbol: TNRC6A
Alias: CAGH26|GW182|KIAA1460|TNRC6
Full Name: trinucleotide repeat containing 6A
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 37029 bases
Position: chrGL429789:12045988-12083016
Accession: 11969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000002462	Ago_hook	PF10427.9	4.7e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000002709	TNRC6A-201	5685	XM_006085875	ENSMLUP00000002462	1894 (aa)	-	G1NYH2

Gene Model

Click here to download ENSMLUG00000002701's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000002701's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000002701	TNRC6A	99	37.399	ENSMLUG00000008765	TNRC6B	98	37.487
ENSMLUG00000002701	TNRC6A	99	41.953	ENSMLUG00000014431	TNRC6C	97	43.071

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000002701	TNRC6A	100	92.662	ENSG00000090905	TNRC6A	100	95.000	Homo_sapiens
ENSMLUG00000002701	TNRC6A	100	93.386	ENSAMEG00000009333	TNRC6A	99	93.438	Ailuropoda_melanoleuca
ENSMLUG00000002701	TNRC6A	100	80.294	ENSAPLG00000009978	TNRC6A	100	80.346	Anas_platyrhynchos
ENSMLUG00000002701	TNRC6A	97	55.008	ENSACAG00000011857	TNRC6A	97	55.813	Anolis_carolinensis
ENSMLUG00000002701	TNRC6A	100	92.591	ENSANAG00000025252	TNRC6A	98	92.628	Aotus_nancymaae
ENSMLUG00000002701	TNRC6A	94	55.862	ENSAMXG00000019919	tnrc6a	100	55.355	Astyanax_mexicanus
ENSMLUG00000002701	TNRC6A	100	92.782	ENSBTAG00000017999	TNRC6A	99	92.835	Bos_taurus
ENSMLUG00000002701	TNRC6A	100	92.215	ENSCJAG00000020677	TNRC6A	97	92.215	Callithrix_jacchus
ENSMLUG00000002701	TNRC6A	100	93.487	ENSCAFG00000017531	TNRC6A	97	93.592	Canis_familiaris
ENSMLUG00000002701	TNRC6A	100	92.384	ENSCAFG00020021160	TNRC6A	99	92.437	Canis_lupus_dingo
ENSMLUG00000002701	TNRC6A	100	89.989	ENSCHIG00000019448	TNRC6A	99	90.042	Capra_hircus
ENSMLUG00000002701	TNRC6A	100	92.962	ENSTSYG00000012711	TNRC6A	99	92.962	Carlito_syrichta
ENSMLUG00000002701	TNRC6A	100	90.137	ENSCPOG00000036684	TNRC6A	97	90.137	Cavia_porcellus
ENSMLUG00000002701	TNRC6A	100	92.756	ENSCCAG00000033664	TNRC6A	99	92.703	Cebus_capucinus
ENSMLUG00000002701	TNRC6A	100	91.571	ENSCATG00000019284	TNRC6A	97	91.571	Cercocebus_atys
ENSMLUG00000002701	TNRC6A	100	86.239	ENSCLAG00000010217	TNRC6A	97	86.397	Chinchilla_lanigera
ENSMLUG00000002701	TNRC6A	100	92.812	ENSCSAG00000006561	TNRC6A	97	92.865	Chlorocebus_sabaeus
ENSMLUG00000002701	TNRC6A	95	89.381	ENSCHOG00000009374	TNRC6A	92	89.381	Choloepus_hoffmanni
ENSMLUG00000002701	TNRC6A	94	77.428	ENSCPBG00000001881	TNRC6A	99	77.485	Chrysemys_picta_bellii
ENSMLUG00000002701	TNRC6A	100	93.277	ENSCANG00000041549	TNRC6A	97	93.277	Colobus_angolensis_palliatus
ENSMLUG00000002701	TNRC6A	100	91.368	ENSCGRG00001015021	Tnrc6a	99	91.737	Cricetulus_griseus_chok1gshd
ENSMLUG00000002701	TNRC6A	100	88.065	ENSCGRG00000013351	Tnrc6a	97	88.381	Cricetulus_griseus_crigri
ENSMLUG00000002701	TNRC6A	94	55.229	ENSDARG00000079688	tnrc6a	97	56.257	Danio_rerio
ENSMLUG00000002701	TNRC6A	100	91.105	ENSDNOG00000013989	TNRC6A	99	91.105	Dasypus_novemcinctus
ENSMLUG00000002701	TNRC6A	100	83.079	ENSETEG00000014658	TNRC6A	99	83.131	Echinops_telfairi
ENSMLUG00000002701	TNRC6A	100	93.569	ENSEASG00005017693	TNRC6A	99	94.043	Equus_asinus_asinus
ENSMLUG00000002701	TNRC6A	100	93.569	ENSECAG00000025056	TNRC6A	99	94.043	Equus_caballus
ENSMLUG00000002701	TNRC6A	100	87.002	ENSEEUG00000004530	TNRC6A	99	87.002	Erinaceus_europaeus
ENSMLUG00000002701	TNRC6A	100	93.316	ENSFCAG00000025236	TNRC6A	99	93.368	Felis_catus
ENSMLUG00000002701	TNRC6A	100	78.096	ENSFALG00000003757	TNRC6A	97	78.148	Ficedula_albicollis
ENSMLUG00000002701	TNRC6A	94	78.071	ENSGALG00000006068	TNRC6A	99	78.351	Gallus_gallus
ENSMLUG00000002701	TNRC6A	94	77.125	ENSGAGG00000023209	TNRC6A	99	77.181	Gopherus_agassizii
ENSMLUG00000002701	TNRC6A	100	92.505	ENSGGOG00000005137	TNRC6A	99	92.505	Gorilla_gorilla
ENSMLUG00000002701	TNRC6A	97	70.245	ENSHGLG00000007368	-	93	70.027	Heterocephalus_glaber_female
ENSMLUG00000002701	TNRC6A	99	88.713	ENSHGLG00000012474	-	97	88.608	Heterocephalus_glaber_female
ENSMLUG00000002701	TNRC6A	99	88.400	ENSHGLG00100012496	-	97	88.347	Heterocephalus_glaber_male
ENSMLUG00000002701	TNRC6A	100	92.255	ENSSTOG00000023394	TNRC6A	96	92.308	Ictidomys_tridecemlineatus
ENSMLUG00000002701	TNRC6A	100	68.880	ENSLACG00000006277	TNRC6A	100	69.606	Latimeria_chalumnae
ENSMLUG00000002701	TNRC6A	100	83.223	ENSLOCG00000005517	tnrc6a	90	83.223	Lepisosteus_oculatus
ENSMLUG00000002701	TNRC6A	100	89.926	ENSLAFG00000004209	TNRC6A	99	90.295	Loxodonta_africana
ENSMLUG00000002701	TNRC6A	100	91.623	ENSMFAG00000003824	TNRC6A	99	91.623	Macaca_fascicularis
ENSMLUG00000002701	TNRC6A	100	92.805	ENSMMUG00000020428	TNRC6A	97	92.857	Macaca_mulatta
ENSMLUG00000002701	TNRC6A	100	92.529	ENSMNEG00000034854	TNRC6A	99	91.567	Macaca_nemestrina
ENSMLUG00000002701	TNRC6A	100	91.334	ENSMLEG00000042737	TNRC6A	97	91.282	Mandrillus_leucophaeus
ENSMLUG00000002701	TNRC6A	99	78.474	ENSMGAG00000006455	TNRC6A	93	80.541	Meleagris_gallopavo
ENSMLUG00000002701	TNRC6A	100	88.983	ENSMAUG00000012750	Tnrc6a	97	89.246	Mesocricetus_auratus
ENSMLUG00000002701	TNRC6A	100	93.449	ENSMICG00000030685	TNRC6A	98	93.344	Microcebus_murinus
ENSMLUG00000002701	TNRC6A	100	89.504	ENSMOCG00000000152	Tnrc6a	97	89.293	Microtus_ochrogaster
ENSMLUG00000002701	TNRC6A	100	80.031	ENSMODG00000016348	TNRC6A	96	80.340	Monodelphis_domestica
ENSMLUG00000002701	TNRC6A	100	88.133	MGP_CAROLIEiJ_G0030425	Tnrc6a	99	92.561	Mus_caroli
ENSMLUG00000002701	TNRC6A	100	88.555	ENSMUSG00000052707	Tnrc6a	99	92.847	Mus_musculus
ENSMLUG00000002701	TNRC6A	100	88.508	MGP_PahariEiJ_G0013635	Tnrc6a	99	93.133	Mus_pahari
ENSMLUG00000002701	TNRC6A	100	90.823	MGP_SPRETEiJ_G0031539	Tnrc6a	99	92.704	Mus_spretus
ENSMLUG00000002701	TNRC6A	100	80.411	ENSMPUG00000012324	TNRC6A	100	80.305	Mustela_putorius_furo
ENSMLUG00000002701	TNRC6A	100	89.937	ENSNGAG00000020702	Tnrc6a	97	90.042	Nannospalax_galili
ENSMLUG00000002701	TNRC6A	100	90.366	ENSNLEG00000011851	TNRC6A	98	90.291	Nomascus_leucogenys
ENSMLUG00000002701	TNRC6A	77	88.151	ENSMEUG00000015959	-	74	88.151	Notamacropus_eugenii
ENSMLUG00000002701	TNRC6A	96	97.761	ENSOPRG00000005819	TNRC6A	93	97.761	Ochotona_princeps
ENSMLUG00000002701	TNRC6A	99	85.586	ENSODEG00000012802	TNRC6A	97	85.692	Octodon_degus
ENSMLUG00000002701	TNRC6A	90	81.692	ENSOANG00000007672	TNRC6A	100	81.692	Ornithorhynchus_anatinus
ENSMLUG00000002701	TNRC6A	100	90.459	ENSOCUG00000004325	TNRC6A	100	90.406	Oryctolagus_cuniculus
ENSMLUG00000002701	TNRC6A	100	93.421	ENSOGAG00000006666	TNRC6A	98	93.421	Otolemur_garnettii
ENSMLUG00000002701	TNRC6A	100	91.807	ENSOARG00000017950	TNRC6A	98	91.807	Ovis_aries
ENSMLUG00000002701	TNRC6A	100	92.420	ENSPPAG00000028379	TNRC6A	99	92.473	Pan_paniscus
ENSMLUG00000002701	TNRC6A	100	93.316	ENSPPRG00000005861	TNRC6A	97	93.368	Panthera_pardus
ENSMLUG00000002701	TNRC6A	100	91.929	ENSPTIG00000006346	TNRC6A	97	91.929	Panthera_tigris_altaica
ENSMLUG00000002701	TNRC6A	100	92.424	ENSPTRG00000007898	TNRC6A	99	92.476	Pan_troglodytes
ENSMLUG00000002701	TNRC6A	100	90.372	ENSPANG00000018523	TNRC6A	99	89.625	Papio_anubis
ENSMLUG00000002701	TNRC6A	90	75.862	ENSPKIG00000012859	tnrc6a	99	75.862	Paramormyrops_kingsleyae
ENSMLUG00000002701	TNRC6A	80	73.774	ENSPSIG00000003965	TNRC6A	100	73.839	Pelodiscus_sinensis
ENSMLUG00000002701	TNRC6A	100	89.451	ENSPEMG00000016318	Tnrc6a	97	89.293	Peromyscus_maniculatus_bairdii
ENSMLUG00000002701	TNRC6A	100	81.589	ENSPCIG00000012106	TNRC6A	99	81.799	Phascolarctos_cinereus
ENSMLUG00000002701	TNRC6A	100	92.356	ENSPPYG00000007202	TNRC6A	97	92.356	Pongo_abelii
ENSMLUG00000002701	TNRC6A	95	94.845	ENSPCAG00000008260	TNRC6A	91	94.845	Procavia_capensis
ENSMLUG00000002701	TNRC6A	100	90.928	ENSPCOG00000010134	TNRC6A	97	90.876	Propithecus_coquereli
ENSMLUG00000002701	TNRC6A	89	71.318	ENSPVAG00000012066	TNRC6A	97	71.378	Pteropus_vampyrus
ENSMLUG00000002701	TNRC6A	99	90.289	ENSRNOG00000024737	Tnrc6a	97	90.346	Rattus_norvegicus
ENSMLUG00000002701	TNRC6A	100	92.962	ENSRBIG00000014222	TNRC6A	99	93.015	Rhinopithecus_bieti
ENSMLUG00000002701	TNRC6A	100	93.211	ENSRROG00000032360	TNRC6A	97	93.263	Rhinopithecus_roxellana
ENSMLUG00000002701	TNRC6A	100	92.616	ENSSBOG00000036197	TNRC6A	100	94.207	Saimiri_boliviensis_boliviensis
ENSMLUG00000002701	TNRC6A	94	79.157	ENSSHAG00000008811	TNRC6A	99	79.545	Sarcophilus_harrisii
ENSMLUG00000002701	TNRC6A	90	67.814	ENSSFOG00015008920	tnrc6a	99	67.820	Scleropages_formosus
ENSMLUG00000002701	TNRC6A	74	82.065	ENSSARG00000002479	TNRC6A	89	83.152	Sorex_araneus
ENSMLUG00000002701	TNRC6A	93	77.255	ENSSPUG00000010525	TNRC6A	99	77.255	Sphenodon_punctatus
ENSMLUG00000002701	TNRC6A	100	90.209	ENSSSCG00000038870	TNRC6A	100	94.906	Sus_scrofa
ENSMLUG00000002701	TNRC6A	100	76.653	ENSTGUG00000006142	TNRC6A	97	76.758	Taeniopygia_guttata
ENSMLUG00000002701	TNRC6A	100	90.561	ENSTBEG00000014965	TNRC6A	99	90.614	Tupaia_belangeri
ENSMLUG00000002701	TNRC6A	93	96.980	ENSTTRG00000002008	TNRC6A	90	96.980	Tursiops_truncatus
ENSMLUG00000002701	TNRC6A	81	90.019	ENSUAMG00000006656	-	93	90.019	Ursus_americanus
ENSMLUG00000002701	TNRC6A	100	93.826	ENSUMAG00000008274	TNRC6A	99	93.879	Ursus_maritimus
ENSMLUG00000002701	TNRC6A	56	84.275	ENSVPAG00000010764	-	55	84.275	Vicugna_pacos
ENSMLUG00000002701	TNRC6A	100	93.277	ENSVVUG00000005380	TNRC6A	99	93.382	Vulpes_vulpes
ENSMLUG00000002701	TNRC6A	97	64.171	ENSXETG00000030437	TNRC6A	99	64.528	Xenopus_tropicalis