EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000002894 (Gene tree)
Gene ID: 102433718
Gene Symbol: ZNF454
Alias: FLJ37444
Full Name: zinc finger protein 454
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 45613 bases
Position: chrGL430153:377743-423355
Accession: 102433718
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000002625	zf-C2H2	PF00096.26	5.5e-67	1	12
ENSMLUP00000002625	zf-C2H2	PF00096.26	5.5e-67	2	12
ENSMLUP00000002625	zf-C2H2	PF00096.26	5.5e-67	3	12
ENSMLUP00000002625	zf-C2H2	PF00096.26	5.5e-67	4	12
ENSMLUP00000002625	zf-C2H2	PF00096.26	5.5e-67	5	12
ENSMLUP00000002625	zf-C2H2	PF00096.26	5.5e-67	6	12
ENSMLUP00000002625	zf-C2H2	PF00096.26	5.5e-67	7	12
ENSMLUP00000002625	zf-C2H2	PF00096.26	5.5e-67	8	12
ENSMLUP00000002625	zf-C2H2	PF00096.26	5.5e-67	9	12
ENSMLUP00000002625	zf-C2H2	PF00096.26	5.5e-67	10	12
ENSMLUP00000002625	zf-C2H2	PF00096.26	5.5e-67	11	12
ENSMLUP00000002625	zf-C2H2	PF00096.26	5.5e-67	12	12
ENSMLUP00000015056	zf-C2H2	PF00096.26	4.2e-06	1	1
ENSMLUP00000002625	zf-met	PF12874.7	4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000002889	ZNF454-201	1560	XM_006101901	ENSMLUP00000002625	519 (aa)	XP_006101963	L7N142
ENSMLUT00000016521	ZNF454-202	507	-	ENSMLUP00000015056	169 (aa)	-	G1PUT4

Gene Model

Click here to download ENSMLUG00000002894's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000002894's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000002894	ZNF454	100	53.659	ENSMLUG00000015757	-	96	54.416
ENSMLUG00000002894	ZNF454	71	45.455	ENSMLUG00000006256	ZNF770	96	45.455
ENSMLUG00000002894	ZNF454	76	33.711	ENSMLUG00000006097	PRDM5	80	33.711
ENSMLUG00000002894	ZNF454	99	53.867	ENSMLUG00000013784	ZNF235	99	53.867
ENSMLUG00000002894	ZNF454	99	46.497	ENSMLUG00000009276	-	99	46.497
ENSMLUG00000002894	ZNF454	69	33.178	ENSMLUG00000009100	ZNF784	65	33.333
ENSMLUG00000002894	ZNF454	70	32.292	ENSMLUG00000009484	ZNF521	95	32.292
ENSMLUG00000002894	ZNF454	74	52.145	ENSMLUG00000001576	-	99	50.585
ENSMLUG00000002894	ZNF454	66	45.652	ENSMLUG00000015541	SALL1	52	38.372
ENSMLUG00000002894	ZNF454	99	50.704	ENSMLUG00000014654	ZNF112	96	50.704
ENSMLUG00000002894	ZNF454	67	33.908	ENSMLUG00000002158	GTF3A	81	34.653
ENSMLUG00000002894	ZNF454	99	44.118	ENSMLUG00000003693	-	100	44.118
ENSMLUG00000002894	ZNF454	99	42.272	ENSMLUG00000012039	ZNF317	87	42.272
ENSMLUG00000002894	ZNF454	68	36.905	ENSMLUG00000009878	ZNF423	88	37.037
ENSMLUG00000002894	ZNF454	94	47.619	ENSMLUG00000024124	-	56	47.619
ENSMLUG00000002894	ZNF454	67	41.818	ENSMLUG00000001086	SNAI2	56	41.818
ENSMLUG00000002894	ZNF454	74	41.573	ENSMLUG00000011089	ZNF236	67	43.373
ENSMLUG00000002894	ZNF454	71	36.338	ENSMLUG00000014677	ZNF574	93	36.339
ENSMLUG00000002894	ZNF454	73	43.491	ENSMLUG00000025202	ZBTB17	60	43.491
ENSMLUG00000002894	ZNF454	68	40.698	ENSMLUG00000008405	-	56	40.698
ENSMLUG00000002894	ZNF454	67	32.189	ENSMLUG00000009942	PATZ1	53	32.189
ENSMLUG00000002894	ZNF454	69	33.607	ENSMLUG00000004755	ZNF646	68	31.724
ENSMLUG00000002894	ZNF454	100	54.887	ENSMLUG00000004199	-	100	56.402
ENSMLUG00000002894	ZNF454	99	51.103	ENSMLUG00000002042	ZFP1	99	51.103
ENSMLUG00000002894	ZNF454	71	42.041	ENSMLUG00000003468	-	100	42.041
ENSMLUG00000002894	ZNF454	100	54.203	ENSMLUG00000011734	ZNF81	99	54.203

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000002894	ZNF454	79	84.108	ENSCAPG00000006920	-	98	84.108	Cavia_aperea
ENSMLUG00000002894	ZNF454	79	84.352	ENSCPOG00000035563	-	98	84.352	Cavia_porcellus
ENSMLUG00000002894	ZNF454	100	85.934	ENSCATG00000031926	ZNF454	98	85.934	Cercocebus_atys
ENSMLUG00000002894	ZNF454	84	81.651	ENSCLAG00000010195	-	100	81.881	Chinchilla_lanigera
ENSMLUG00000002894	ZNF454	100	76.296	ENSCGRG00001013939	Zfp454	98	76.296	Cricetulus_griseus_chok1gshd
ENSMLUG00000002894	ZNF454	100	76.111	ENSCGRG00000014813	Zfp454	99	76.111	Cricetulus_griseus_crigri
ENSMLUG00000002894	ZNF454	93	89.485	ENSEASG00005012616	ZNF454	100	89.485	Equus_asinus_asinus
ENSMLUG00000002894	ZNF454	99	82.364	ENSEEUG00000007684	ZNF454	100	82.364	Erinaceus_europaeus
ENSMLUG00000002894	ZNF454	100	85.934	ENSMFAG00000043337	ZNF454	98	85.934	Macaca_fascicularis
ENSMLUG00000002894	ZNF454	100	85.934	ENSMMUG00000045647	ZNF454	98	85.934	Macaca_mulatta
ENSMLUG00000002894	ZNF454	100	85.934	ENSMNEG00000002699	ZNF454	98	85.934	Macaca_nemestrina
ENSMLUG00000002894	ZNF454	100	85.934	ENSMLEG00000039955	ZNF454	98	85.934	Mandrillus_leucophaeus
ENSMLUG00000002894	ZNF454	100	75.830	ENSMUSG00000048728	Zfp454	99	81.651	Mus_musculus
ENSMLUG00000002894	ZNF454	100	85.934	ENSPANG00000009509	ZNF454	98	85.934	Papio_anubis
ENSMLUG00000002894	ZNF454	100	89.403	ENSSSCG00000027351	ZNF454	98	89.403	Sus_scrofa
ENSMLUG00000002894	ZNF454	85	88.009	ENSUAMG00000026246	ZNF454	100	88.009	Ursus_americanus
ENSMLUG00000002894	ZNF454	91	86.920	ENSUMAG00000023930	ZNF454	94	86.920	Ursus_maritimus
ENSMLUG00000002894	ZNF454	100	85.742	ENSVVUG00000001267	ZNF454	84	85.742	Vulpes_vulpes