EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000003376 (Gene tree)
Gene ID: 102418173
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 38787 bases
Position: chrGL430005:247517-286303
Accession: 23207
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000019873	Rif1_N	PF12231.8	2.5e-20	1	1
ENSMLUP00000003078	Rif1_N	PF12231.8	2.5e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000028456	RIF1-201	6567	XM_006098493	ENSMLUP00000019873	2189 (aa)	-	G1Q840
ENSMLUT00000003386	RIF1-202	6669	-	ENSMLUP00000003078	2222 (aa)	-	G1P012

Gene Model

Click here to download ENSMLUG00000003376's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000003376's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000003376	RIF1	100	76.961	ENSG00000080345	RIF1	99	70.651	Homo_sapiens
ENSMLUG00000003376	RIF1	100	80.761	ENSAMEG00000008461	RIF1	90	80.761	Ailuropoda_melanoleuca
ENSMLUG00000003376	RIF1	60	45.311	ENSAOCG00000017231	rif1	53	45.311	Amphiprion_ocellaris
ENSMLUG00000003376	RIF1	60	52.465	ENSAPEG00000013228	rif1	51	52.069	Amphiprion_percula
ENSMLUG00000003376	RIF1	63	45.838	ENSATEG00000022887	rif1	57	45.838	Anabas_testudineus
ENSMLUG00000003376	RIF1	82	65.598	ENSAPLG00000007092	RIF1	81	65.598	Anas_platyrhynchos
ENSMLUG00000003376	RIF1	82	59.587	ENSACAG00000003714	RIF1	82	53.511	Anolis_carolinensis
ENSMLUG00000003376	RIF1	100	75.751	ENSANAG00000024840	RIF1	90	75.751	Aotus_nancymaae
ENSMLUG00000003376	RIF1	97	89.796	ENSBTAG00000021020	RIF1	95	89.796	Bos_taurus
ENSMLUG00000003376	RIF1	100	75.527	ENSCJAG00000003138	RIF1	90	75.527	Callithrix_jacchus
ENSMLUG00000003376	RIF1	100	79.310	ENSCAFG00000005670	RIF1	87	79.355	Canis_familiaris
ENSMLUG00000003376	RIF1	100	78.174	ENSCAFG00020016401	RIF1	90	78.220	Canis_lupus_dingo
ENSMLUG00000003376	RIF1	99	78.725	ENSCHIG00000020327	RIF1	90	78.636	Capra_hircus
ENSMLUG00000003376	RIF1	99	76.109	ENSTSYG00000008861	RIF1	92	76.109	Carlito_syrichta
ENSMLUG00000003376	RIF1	86	71.163	ENSCAPG00000008957	RIF1	92	71.163	Cavia_aperea
ENSMLUG00000003376	RIF1	100	67.433	ENSCPOG00000037898	RIF1	89	67.577	Cavia_porcellus
ENSMLUG00000003376	RIF1	99	76.733	ENSCCAG00000024760	RIF1	91	76.733	Cebus_capucinus
ENSMLUG00000003376	RIF1	100	76.827	ENSCATG00000033353	RIF1	90	76.827	Cercocebus_atys
ENSMLUG00000003376	RIF1	100	68.921	ENSCLAG00000001517	RIF1	93	69.736	Chinchilla_lanigera
ENSMLUG00000003376	RIF1	100	76.916	ENSCSAG00000016089	RIF1	90	76.916	Chlorocebus_sabaeus
ENSMLUG00000003376	RIF1	97	72.790	ENSCHOG00000007187	RIF1	87	72.790	Choloepus_hoffmanni
ENSMLUG00000003376	RIF1	88	69.822	ENSCPBG00000025885	RIF1	85	70.920	Chrysemys_picta_bellii
ENSMLUG00000003376	RIF1	100	76.658	ENSCANG00000028962	RIF1	90	76.658	Colobus_angolensis_palliatus
ENSMLUG00000003376	RIF1	100	67.121	ENSCGRG00001024589	Rif1	89	67.121	Cricetulus_griseus_chok1gshd
ENSMLUG00000003376	RIF1	100	68.466	ENSCGRG00000010713	Rif1	91	68.466	Cricetulus_griseus_crigri
ENSMLUG00000003376	RIF1	56	56.277	ENSCSEG00000003945	rif1	52	56.277	Cynoglossus_semilaevis
ENSMLUG00000003376	RIF1	60	46.588	ENSCVAG00000022479	rif1	56	46.588	Cyprinodon_variegatus
ENSMLUG00000003376	RIF1	99	74.358	ENSDNOG00000011194	RIF1	87	74.358	Dasypus_novemcinctus
ENSMLUG00000003376	RIF1	94	69.697	ENSETEG00000012421	RIF1	82	69.512	Echinops_telfairi
ENSMLUG00000003376	RIF1	97	90.826	ENSEASG00005023434	RIF1	91	90.826	Equus_asinus_asinus
ENSMLUG00000003376	RIF1	96	90.465	ENSECAG00000012679	RIF1	89	90.465	Equus_caballus
ENSMLUG00000003376	RIF1	100	79.650	ENSFCAG00000029742	RIF1	90	79.650	Felis_catus
ENSMLUG00000003376	RIF1	82	63.110	ENSFALG00000013874	RIF1	89	57.143	Ficedula_albicollis
ENSMLUG00000003376	RIF1	100	71.615	ENSFDAG00000006538	RIF1	89	71.948	Fukomys_damarensis
ENSMLUG00000003376	RIF1	59	48.004	ENSFHEG00000013721	rif1	55	47.124	Fundulus_heteroclitus
ENSMLUG00000003376	RIF1	50	50.794	ENSGMOG00000003517	rif1	66	50.794	Gadus_morhua
ENSMLUG00000003376	RIF1	82	62.647	ENSGALG00000012484	RIF1	85	62.941	Gallus_gallus
ENSMLUG00000003376	RIF1	61	47.419	ENSGAFG00000017196	rif1	51	54.426	Gambusia_affinis
ENSMLUG00000003376	RIF1	56	53.061	ENSGACG00000008579	rif1	59	52.610	Gasterosteus_aculeatus
ENSMLUG00000003376	RIF1	88	69.461	ENSGAGG00000012595	RIF1	88	70.571	Gopherus_agassizii
ENSMLUG00000003376	RIF1	89	88.764	ENSGGOG00000040178	RIF1	85	88.764	Gorilla_gorilla
ENSMLUG00000003376	RIF1	71	53.968	ENSHBUG00000007125	rif1	55	53.968	Haplochromis_burtoni
ENSMLUG00000003376	RIF1	94	71.306	ENSHGLG00100009807	RIF1	89	71.306	Heterocephalus_glaber_male
ENSMLUG00000003376	RIF1	60	45.618	ENSHCOG00000015943	rif1	50	45.817	Hippocampus_comes
ENSMLUG00000003376	RIF1	62	49.149	ENSIPUG00000021703	rif1	56	49.051	Ictalurus_punctatus
ENSMLUG00000003376	RIF1	100	74.255	ENSSTOG00000020712	RIF1	90	74.389	Ictidomys_tridecemlineatus
ENSMLUG00000003376	RIF1	99	68.196	ENSJJAG00000023000	Rif1	90	68.105	Jaculus_jaculus
ENSMLUG00000003376	RIF1	59	47.878	ENSKMAG00000002852	rif1	55	47.698	Kryptolebias_marmoratus
ENSMLUG00000003376	RIF1	83	61.194	ENSLACG00000005425	RIF1	78	61.194	Latimeria_chalumnae
ENSMLUG00000003376	RIF1	60	50.439	ENSLOCG00000002657	rif1	73	50.804	Lepisosteus_oculatus
ENSMLUG00000003376	RIF1	100	74.119	ENSLAFG00000009796	RIF1	90	74.237	Loxodonta_africana
ENSMLUG00000003376	RIF1	100	76.827	ENSMFAG00000032233	RIF1	90	76.827	Macaca_fascicularis
ENSMLUG00000003376	RIF1	100	77.006	ENSMMUG00000008611	RIF1	90	77.006	Macaca_mulatta
ENSMLUG00000003376	RIF1	100	76.782	ENSMNEG00000031616	RIF1	90	76.782	Macaca_nemestrina
ENSMLUG00000003376	RIF1	100	76.961	ENSMLEG00000042945	RIF1	90	76.961	Mandrillus_leucophaeus
ENSMLUG00000003376	RIF1	59	48.067	ENSMZEG00005020920	rif1	57	48.067	Maylandia_zebra
ENSMLUG00000003376	RIF1	82	59.384	ENSMGAG00000012732	RIF1	80	59.664	Meleagris_gallopavo
ENSMLUG00000003376	RIF1	94	88.679	ENSMAUG00000013158	Rif1	88	88.679	Mesocricetus_auratus
ENSMLUG00000003376	RIF1	100	78.879	ENSMICG00000046127	RIF1	90	78.879	Microcebus_murinus
ENSMLUG00000003376	RIF1	99	68.037	ENSMOCG00000009381	Rif1	89	68.037	Microtus_ochrogaster
ENSMLUG00000003376	RIF1	59	47.742	ENSMMOG00000006519	rif1	53	47.742	Mola_mola
ENSMLUG00000003376	RIF1	100	57.414	ENSMODG00000003703	RIF1	90	57.074	Monodelphis_domestica
ENSMLUG00000003376	RIF1	53	50.755	ENSMALG00000016759	rif1	53	51.276	Monopterus_albus
ENSMLUG00000003376	RIF1	100	67.713	MGP_CAROLIEiJ_G0023555	Rif1	89	67.713	Mus_caroli
ENSMLUG00000003376	RIF1	100	67.787	ENSMUSG00000036202	Rif1	89	67.787	Mus_musculus
ENSMLUG00000003376	RIF1	100	66.470	MGP_PahariEiJ_G0025006	Rif1	89	66.515	Mus_pahari
ENSMLUG00000003376	RIF1	100	67.682	MGP_SPRETEiJ_G0024476	Rif1	90	67.682	Mus_spretus
ENSMLUG00000003376	RIF1	100	79.219	ENSMPUG00000000371	RIF1	90	79.219	Mustela_putorius_furo
ENSMLUG00000003376	RIF1	100	70.422	ENSNGAG00000009268	Rif1	89	70.422	Nannospalax_galili
ENSMLUG00000003376	RIF1	59	47.523	ENSNBRG00000014257	rif1	58	47.001	Neolamprologus_brichardi
ENSMLUG00000003376	RIF1	100	75.896	ENSNLEG00000010955	RIF1	89	75.896	Nomascus_leucogenys
ENSMLUG00000003376	RIF1	83	73.762	ENSMEUG00000007601	-	82	73.762	Notamacropus_eugenii
ENSMLUG00000003376	RIF1	99	69.461	ENSODEG00000003950	RIF1	89	69.914	Octodon_degus
ENSMLUG00000003376	RIF1	72	47.282	ENSONIG00000013657	rif1	67	47.282	Oreochromis_niloticus
ENSMLUG00000003376	RIF1	84	73.634	ENSOANG00000006078	-	78	73.634	Ornithorhynchus_anatinus
ENSMLUG00000003376	RIF1	100	73.767	ENSOCUG00000017435	RIF1	90	73.991	Oryctolagus_cuniculus
ENSMLUG00000003376	RIF1	59	46.418	ENSORLG00020001302	rif1	56	46.116	Oryzias_latipes_hni
ENSMLUG00000003376	RIF1	59	45.916	ENSORLG00015000009	rif1	56	46.016	Oryzias_latipes_hsok
ENSMLUG00000003376	RIF1	60	46.045	ENSOMEG00000021513	rif1	57	46.076	Oryzias_melastigma
ENSMLUG00000003376	RIF1	99	75.236	ENSOGAG00000006141	RIF1	90	75.236	Otolemur_garnettii
ENSMLUG00000003376	RIF1	99	78.959	ENSOARG00000008930	RIF1	90	78.959	Ovis_aries
ENSMLUG00000003376	RIF1	100	76.782	ENSPPAG00000023754	RIF1	90	76.782	Pan_paniscus
ENSMLUG00000003376	RIF1	100	79.695	ENSPPRG00000003618	RIF1	90	79.695	Panthera_pardus
ENSMLUG00000003376	RIF1	100	79.785	ENSPTIG00000020652	RIF1	90	79.785	Panthera_tigris_altaica
ENSMLUG00000003376	RIF1	100	76.782	ENSPTRG00000012534	RIF1	90	76.782	Pan_troglodytes
ENSMLUG00000003376	RIF1	100	76.871	ENSPANG00000008525	RIF1	90	76.871	Papio_anubis
ENSMLUG00000003376	RIF1	59	49.195	ENSPKIG00000004267	rif1	56	49.195	Paramormyrops_kingsleyae
ENSMLUG00000003376	RIF1	62	42.247	ENSPMGG00000016141	rif1	65	42.247	Periophthalmus_magnuspinnatus
ENSMLUG00000003376	RIF1	100	69.014	ENSPEMG00000000446	Rif1	90	68.969	Peromyscus_maniculatus_bairdii
ENSMLUG00000003376	RIF1	100	56.625	ENSPCIG00000009185	RIF1	89	56.984	Phascolarctos_cinereus
ENSMLUG00000003376	RIF1	59	48.056	ENSPFOG00000017804	rif1	55	48.156	Poecilia_formosa
ENSMLUG00000003376	RIF1	59	49.355	ENSPFOG00000000554	-	59	49.355	Poecilia_formosa
ENSMLUG00000003376	RIF1	59	48.540	ENSPLAG00000017945	rif1	57	48.540	Poecilia_latipinna
ENSMLUG00000003376	RIF1	60	47.727	ENSPMEG00000006897	-	62	47.727	Poecilia_mexicana
ENSMLUG00000003376	RIF1	60	47.271	ENSPREG00000018052	rif1	54	51.583	Poecilia_reticulata
ENSMLUG00000003376	RIF1	100	77.095	ENSPPYG00000012846	RIF1	90	77.095	Pongo_abelii
ENSMLUG00000003376	RIF1	80	95.652	ENSPCAG00000009032	RIF1	72	95.652	Procavia_capensis
ENSMLUG00000003376	RIF1	100	79.372	ENSPCOG00000027888	RIF1	90	79.372	Propithecus_coquereli
ENSMLUG00000003376	RIF1	92	91.250	ENSPVAG00000014276	RIF1	85	91.250	Pteropus_vampyrus
ENSMLUG00000003376	RIF1	59	47.239	ENSPNYG00000012940	rif1	56	47.239	Pundamilia_nyererei
ENSMLUG00000003376	RIF1	60	51.111	ENSPNAG00000016685	rif1	54	51.111	Pygocentrus_nattereri
ENSMLUG00000003376	RIF1	100	66.879	ENSRNOG00000054901	Rif1	89	66.879	Rattus_norvegicus
ENSMLUG00000003376	RIF1	100	76.109	ENSRBIG00000003704	RIF1	90	76.109	Rhinopithecus_bieti
ENSMLUG00000003376	RIF1	100	77.095	ENSRROG00000028206	RIF1	90	77.095	Rhinopithecus_roxellana
ENSMLUG00000003376	RIF1	100	75.403	ENSSBOG00000029530	RIF1	93	75.403	Saimiri_boliviensis_boliviensis
ENSMLUG00000003376	RIF1	100	56.328	ENSSHAG00000018552	RIF1	96	56.477	Sarcophilus_harrisii
ENSMLUG00000003376	RIF1	59	50.961	ENSSFOG00015021539	rif1	57	51.008	Scleropages_formosus
ENSMLUG00000003376	RIF1	60	47.041	ENSSMAG00000011704	rif1	56	46.699	Scophthalmus_maximus
ENSMLUG00000003376	RIF1	60	48.335	ENSSDUG00000015632	rif1	61	45.954	Seriola_dumerili
ENSMLUG00000003376	RIF1	61	80.678	ENSSARG00000007161	-	55	80.952	Sorex_araneus
ENSMLUG00000003376	RIF1	88	60.147	ENSSPUG00000003062	RIF1	86	60.147	Sphenodon_punctatus
ENSMLUG00000003376	RIF1	100	79.839	ENSSSCG00000016395	RIF1	90	79.839	Sus_scrofa
ENSMLUG00000003376	RIF1	60	47.576	ENSTRUG00000015808	rif1	58	47.576	Takifugu_rubripes
ENSMLUG00000003376	RIF1	61	45.949	ENSTNIG00000011538	rif1	58	45.949	Tetraodon_nigroviridis
ENSMLUG00000003376	RIF1	80	88.535	ENSTBEG00000016082	RIF1	72	87.975	Tupaia_belangeri
ENSMLUG00000003376	RIF1	100	81.847	ENSTTRG00000011190	RIF1	90	81.847	Tursiops_truncatus
ENSMLUG00000003376	RIF1	95	90.980	ENSUAMG00000026385	RIF1	97	90.980	Ursus_americanus
ENSMLUG00000003376	RIF1	96	89.213	ENSUMAG00000000337	RIF1	88	90.181	Ursus_maritimus
ENSMLUG00000003376	RIF1	100	78.591	ENSVPAG00000002162	RIF1	90	78.815	Vicugna_pacos
ENSMLUG00000003376	RIF1	100	78.897	ENSVVUG00000011293	RIF1	90	78.897	Vulpes_vulpes
ENSMLUG00000003376	RIF1	53	61.830	ENSXETG00000004530	rif1	60	45.335	Xenopus_tropicalis
ENSMLUG00000003376	RIF1	60	45.322	ENSXMAG00000000506	rif1	53	45.517	Xiphophorus_maculatus