EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000003537 (Gene tree)
Gene ID: 102430972
Gene Symbol: TRANK1
Alias: KIAA0342|LBA1
Full Name: tetratricopeptide repeat and ankyrin repeat containing 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 49870 bases
Position: chrGL429962:1406789-1456658
Accession: 29011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000003229	UvrD-helicase	PF00580.21	2.2e-05	1	1
ENSMLUP00000018549	UvrD-helicase	PF00580.21	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000029595	TRANK1-201	8736	XM_006097097	ENSMLUP00000018549	2911 (aa)	-	G1Q4B6
ENSMLUT00000003547	TRANK1-202	8553	-	ENSMLUP00000003229	2850 (aa)	-	G1P0F1

Gene Model

Click here to download ENSMLUG00000003537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000003537's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000003537	TRANK1	86	57.519	ENSAPLG00000010356	TRANK1	99	57.444	Anas_platyrhynchos
ENSMLUG00000003537	TRANK1	55	84.947	ENSCAFG00020001387	TRANK1	97	85.009	Canis_lupus_dingo
ENSMLUG00000003537	TRANK1	99	82.155	ENSTSYG00000025860	TRANK1	99	82.121	Carlito_syrichta
ENSMLUG00000003537	TRANK1	100	82.365	ENSCLAG00000003643	TRANK1	99	82.191	Chinchilla_lanigera
ENSMLUG00000003537	TRANK1	99	63.435	ENSCPBG00000013529	TRANK1	98	63.372	Chrysemys_picta_bellii
ENSMLUG00000003537	TRANK1	99	84.802	ENSCANG00000039915	TRANK1	99	84.597	Colobus_angolensis_palliatus
ENSMLUG00000003537	TRANK1	98	81.235	ENSDNOG00000003573	TRANK1	98	81.165	Dasypus_novemcinctus
ENSMLUG00000003537	TRANK1	100	83.513	ENSEASG00005007374	TRANK1	98	85.300	Equus_asinus_asinus
ENSMLUG00000003537	TRANK1	99	83.958	ENSECAG00000018264	TRANK1	98	83.958	Equus_caballus
ENSMLUG00000003537	TRANK1	84	79.265	ENSEEUG00000008528	TRANK1	100	79.215	Erinaceus_europaeus
ENSMLUG00000003537	TRANK1	99	56.925	ENSFALG00000002875	TRANK1	99	56.925	Ficedula_albicollis
ENSMLUG00000003537	TRANK1	73	61.171	ENSGALG00000037629	TRANK1	98	61.200	Gallus_gallus
ENSMLUG00000003537	TRANK1	91	63.569	ENSGAGG00000009012	TRANK1	100	63.475	Gopherus_agassizii
ENSMLUG00000003537	TRANK1	99	47.292	ENSLOCG00000004808	TRANK1	99	46.983	Lepisosteus_oculatus
ENSMLUG00000003537	TRANK1	99	57.746	ENSMGAG00000011934	TRANK1	99	57.664	Meleagris_gallopavo
ENSMLUG00000003537	TRANK1	100	82.330	ENSODEG00000003882	TRANK1	97	82.157	Octodon_degus
ENSMLUG00000003537	TRANK1	99	62.013	ENSPSIG00000010217	TRANK1	99	61.998	Pelodiscus_sinensis
ENSMLUG00000003537	TRANK1	67	72.805	ENSPCAG00000002172	-	87	72.805	Procavia_capensis
ENSMLUG00000003537	TRANK1	82	78.096	ENSPVAG00000004199	TRANK1	100	78.048	Pteropus_vampyrus
ENSMLUG00000003537	TRANK1	99	84.915	ENSRBIG00000012281	TRANK1	99	84.600	Rhinopithecus_bieti
ENSMLUG00000003537	TRANK1	99	84.838	ENSRROG00000044487	TRANK1	99	84.634	Rhinopithecus_roxellana
ENSMLUG00000003537	TRANK1	62	88.076	ENSSARG00000007861	-	74	88.076	Sorex_araneus
ENSMLUG00000003537	TRANK1	74	66.513	ENSSPUG00000015974	TRANK1	93	75.771	Sphenodon_punctatus
ENSMLUG00000003537	TRANK1	85	58.979	ENSTGUG00000005694	TRANK1	99	59.100	Taeniopygia_guttata
ENSMLUG00000003537	TRANK1	55	85.759	ENSUAMG00000027609	-	97	85.634	Ursus_americanus
ENSMLUG00000003537	TRANK1	55	84.611	ENSUMAG00000006416	TRANK1	97	84.485	Ursus_maritimus
ENSMLUG00000003537	TRANK1	55	84.760	ENSVVUG00000007788	TRANK1	97	84.822	Vulpes_vulpes