EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000004199 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 40363 bases
Position: chrGL431138:3007-43369
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000022228	zf-C2H2	PF00096.26	7e-75	1	12
ENSMLUP00000022228	zf-C2H2	PF00096.26	7e-75	2	12
ENSMLUP00000022228	zf-C2H2	PF00096.26	7e-75	3	12
ENSMLUP00000022228	zf-C2H2	PF00096.26	7e-75	4	12
ENSMLUP00000022228	zf-C2H2	PF00096.26	7e-75	5	12
ENSMLUP00000022228	zf-C2H2	PF00096.26	7e-75	6	12
ENSMLUP00000022228	zf-C2H2	PF00096.26	7e-75	7	12
ENSMLUP00000022228	zf-C2H2	PF00096.26	7e-75	8	12
ENSMLUP00000022228	zf-C2H2	PF00096.26	7e-75	9	12
ENSMLUP00000022228	zf-C2H2	PF00096.26	7e-75	10	12
ENSMLUP00000022228	zf-C2H2	PF00096.26	7e-75	11	12
ENSMLUP00000022228	zf-C2H2	PF00096.26	7e-75	12	12
ENSMLUP00000015940	zf-C2H2	PF00096.26	2.4e-71	1	13
ENSMLUP00000015940	zf-C2H2	PF00096.26	2.4e-71	2	13
ENSMLUP00000015940	zf-C2H2	PF00096.26	2.4e-71	3	13
ENSMLUP00000015940	zf-C2H2	PF00096.26	2.4e-71	4	13
ENSMLUP00000015940	zf-C2H2	PF00096.26	2.4e-71	5	13
ENSMLUP00000015940	zf-C2H2	PF00096.26	2.4e-71	6	13
ENSMLUP00000015940	zf-C2H2	PF00096.26	2.4e-71	7	13
ENSMLUP00000015940	zf-C2H2	PF00096.26	2.4e-71	8	13
ENSMLUP00000015940	zf-C2H2	PF00096.26	2.4e-71	9	13
ENSMLUP00000015940	zf-C2H2	PF00096.26	2.4e-71	10	13
ENSMLUP00000015940	zf-C2H2	PF00096.26	2.4e-71	11	13
ENSMLUP00000015940	zf-C2H2	PF00096.26	2.4e-71	12	13
ENSMLUP00000015940	zf-C2H2	PF00096.26	2.4e-71	13	13
ENSMLUP00000003832	zf-C2H2	PF00096.26	6.8e-51	1	9
ENSMLUP00000003832	zf-C2H2	PF00096.26	6.8e-51	2	9
ENSMLUP00000003832	zf-C2H2	PF00096.26	6.8e-51	3	9
ENSMLUP00000003832	zf-C2H2	PF00096.26	6.8e-51	4	9
ENSMLUP00000003832	zf-C2H2	PF00096.26	6.8e-51	5	9
ENSMLUP00000003832	zf-C2H2	PF00096.26	6.8e-51	6	9
ENSMLUP00000003832	zf-C2H2	PF00096.26	6.8e-51	7	9
ENSMLUP00000003832	zf-C2H2	PF00096.26	6.8e-51	8	9
ENSMLUP00000003832	zf-C2H2	PF00096.26	6.8e-51	9	9
ENSMLUP00000003832	zf-met	PF12874.7	1.2e-07	1	1
ENSMLUP00000022228	zf-met	PF12874.7	2.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000004210	-	1551	-	ENSMLUP00000003832	516 (aa)	-	G1P1W3
ENSMLUT00000017487	-	1788	-	ENSMLUP00000015940	595 (aa)	-	G1PWZ1
ENSMLUT00000007578	-	1032	-	ENSMLUP00000022228	344 (aa)	-	G1QEU5

Gene Model

Click here to download ENSMLUG00000004199's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000004199's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000004199	-	100	41.818	ENSMLUG00000009878	ZNF423	95	41.818
ENSMLUG00000004199	-	100	50.789	ENSMLUG00000012039	ZNF317	85	45.098
ENSMLUG00000004199	-	100	46.429	ENSMLUG00000004146	ZFAT	53	37.615
ENSMLUG00000004199	-	100	96.518	ENSMLUG00000015757	-	100	96.518
ENSMLUG00000004199	-	100	52.655	ENSMLUG00000000013	-	50	46.970
ENSMLUG00000004199	-	100	55.814	ENSMLUG00000001576	-	99	55.814
ENSMLUG00000004199	-	100	44.444	ENSMLUG00000001086	SNAI2	52	44.444
ENSMLUG00000004199	-	100	56.105	ENSMLUG00000013784	ZNF235	99	53.091
ENSMLUG00000004199	-	100	37.288	ENSMLUG00000014677	ZNF574	92	37.815
ENSMLUG00000004199	-	100	45.902	ENSMLUG00000011089	ZNF236	71	56.604
ENSMLUG00000004199	-	98	34.483	ENSMLUG00000009100	ZNF784	71	45.238
ENSMLUG00000004199	-	100	53.503	ENSMLUG00000011734	ZNF81	99	51.935
ENSMLUG00000004199	-	100	43.750	ENSMLUG00000003468	-	99	43.750
ENSMLUG00000004199	-	100	53.179	ENSMLUG00000003693	-	99	49.627
ENSMLUG00000004199	-	99	36.420	ENSMLUG00000006097	PRDM5	80	36.420
ENSMLUG00000004199	-	86	32.812	ENSMLUG00000009484	ZNF521	92	32.812
ENSMLUG00000004199	-	100	54.094	ENSMLUG00000014654	ZNF112	96	52.174
ENSMLUG00000004199	-	99	33.071	ENSMLUG00000008405	-	52	33.071
ENSMLUG00000004199	-	98	33.108	ENSMLUG00000009942	PATZ1	55	33.108
ENSMLUG00000004199	-	100	45.161	ENSMLUG00000025202	ZBTB17	62	43.130
ENSMLUG00000004199	-	99	36.364	ENSMLUG00000002158	GTF3A	89	33.182
ENSMLUG00000004199	-	100	55.128	ENSMLUG00000002042	ZFP1	99	49.434
ENSMLUG00000004199	-	100	51.884	ENSMLUG00000009276	-	99	47.902
ENSMLUG00000004199	-	100	56.402	ENSMLUG00000002894	ZNF454	100	54.887
ENSMLUG00000004199	-	99	32.759	ENSMLUG00000004755	ZNF646	99	33.645
ENSMLUG00000004199	-	100	42.254	ENSMLUG00000004596	MYNN	53	40.611

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000004199	-	100	93.785	ENSHGLG00000008584	ZNF667	84	93.785	Heterocephalus_glaber_female
ENSMLUG00000004199	-	100	93.785	ENSHGLG00100008287	ZNF667	84	93.785	Heterocephalus_glaber_male