EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000004456 (Gene tree)
Gene ID: 102421726
Gene Symbol: CHD9
Alias: BC022889|FLJ12178|KIAA0308
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 91484 bases
Position: chrGL430227:512459-603942
Accession: 102421726
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000004068	ResIII	PF04851.15	5.5e-07	1	1
ENSMLUP00000004068	BRK	PF07533.16	2.5e-30	1	2
ENSMLUP00000004068	BRK	PF07533.16	2.5e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000004470	CHD9-201	8700	XM_006103068	ENSMLUP00000004068	2899 (aa)	XP_006103135	G1P2H9

Gene Model

Click here to download ENSMLUG00000004456's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000004456's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000004456	CHD9	68	65.500	ENSMLUG00000016247	CHD6	79	62.012
ENSMLUG00000004456	CHD9	68	68.196	ENSMLUG00000001878	CHD8	72	68.431
ENSMLUG00000004456	CHD9	83	70.007	ENSMLUG00000015266	CHD7	91	53.666

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000004456	CHD9	100	94.379	ENSG00000177200	CHD9	100	98.901	Homo_sapiens
ENSMLUG00000004456	CHD9	85	70.054	ENSAPOG00000023034	chd9	66	74.896	Acanthochromis_polyacanthus
ENSMLUG00000004456	CHD9	100	94.798	ENSAMEG00000016232	CHD9	100	95.143	Ailuropoda_melanoleuca
ENSMLUG00000004456	CHD9	79	68.790	ENSACIG00000004097	chd9	73	61.311	Amphilophus_citrinellus
ENSMLUG00000004456	CHD9	79	70.071	ENSAOCG00000005487	chd9	67	75.075	Amphiprion_ocellaris
ENSMLUG00000004456	CHD9	83	71.491	ENSAPEG00000009859	chd9	99	61.067	Amphiprion_percula
ENSMLUG00000004456	CHD9	78	71.490	ENSATEG00000002748	chd9	97	63.848	Anabas_testudineus
ENSMLUG00000004456	CHD9	99	83.513	ENSAPLG00000002826	CHD9	74	85.875	Anas_platyrhynchos
ENSMLUG00000004456	CHD9	99	80.436	ENSACAG00000016150	CHD9	98	80.748	Anolis_carolinensis
ENSMLUG00000004456	CHD9	100	94.588	ENSANAG00000015630	CHD9	100	97.802	Aotus_nancymaae
ENSMLUG00000004456	CHD9	79	69.975	ENSACLG00000016899	chd9	73	62.705	Astatotilapia_calliptera
ENSMLUG00000004456	CHD9	86	67.783	ENSAMXG00000005652	chd9	68	74.821	Astyanax_mexicanus
ENSMLUG00000004456	CHD9	100	94.142	ENSBTAG00000002287	CHD9	100	94.418	Bos_taurus
ENSMLUG00000004456	CHD9	100	93.828	ENSCJAG00000001573	CHD9	100	98.168	Callithrix_jacchus
ENSMLUG00000004456	CHD9	100	94.590	ENSCAFG00000009699	CHD9	100	94.900	Canis_familiaris
ENSMLUG00000004456	CHD9	100	94.590	ENSCAFG00020002879	CHD9	100	99.267	Canis_lupus_dingo
ENSMLUG00000004456	CHD9	100	94.105	ENSTSYG00000007693	CHD9	100	98.168	Carlito_syrichta
ENSMLUG00000004456	CHD9	81	78.925	ENSCAPG00000011604	CHD9	81	79.513	Cavia_aperea
ENSMLUG00000004456	CHD9	100	90.555	ENSCPOG00000036544	CHD9	100	90.555	Cavia_porcellus
ENSMLUG00000004456	CHD9	100	93.864	ENSCCAG00000036178	CHD9	100	97.436	Cebus_capucinus
ENSMLUG00000004456	CHD9	100	93.007	ENSCATG00000036753	CHD9	100	98.168	Cercocebus_atys
ENSMLUG00000004456	CHD9	99	94.203	ENSCLAG00000007137	CHD9	99	95.723	Chinchilla_lanigera
ENSMLUG00000004456	CHD9	100	93.802	ENSCSAG00000005311	CHD9	100	94.008	Chlorocebus_sabaeus
ENSMLUG00000004456	CHD9	74	98.077	ENSCHOG00000003935	CHD9	76	98.077	Choloepus_hoffmanni
ENSMLUG00000004456	CHD9	99	84.663	ENSCPBG00000012459	CHD9	99	91.474	Chrysemys_picta_bellii
ENSMLUG00000004456	CHD9	100	93.627	ENSCANG00000030349	CHD9	100	98.168	Colobus_angolensis_palliatus
ENSMLUG00000004456	CHD9	99	90.757	ENSCGRG00001016150	Chd9	99	90.236	Cricetulus_griseus_chok1gshd
ENSMLUG00000004456	CHD9	99	90.757	ENSCGRG00000012850	Chd9	99	95.029	Cricetulus_griseus_crigri
ENSMLUG00000004456	CHD9	78	69.902	ENSCSEG00000009209	chd9	66	73.585	Cynoglossus_semilaevis
ENSMLUG00000004456	CHD9	55	75.015	ENSDARG00000074498	chd9	67	75.061	Danio_rerio
ENSMLUG00000004456	CHD9	81	93.410	ENSDNOG00000006045	CHD9	100	93.878	Dasypus_novemcinctus
ENSMLUG00000004456	CHD9	69	92.758	ENSDORG00000008523	-	100	92.857	Dipodomys_ordii
ENSMLUG00000004456	CHD9	94	97.895	ENSETEG00000009565	CHD9	94	97.895	Echinops_telfairi
ENSMLUG00000004456	CHD9	99	94.518	ENSEASG00005014832	CHD9	100	94.935	Equus_asinus_asinus
ENSMLUG00000004456	CHD9	100	94.454	ENSECAG00000011505	CHD9	100	94.764	Equus_caballus
ENSMLUG00000004456	CHD9	81	96.133	ENSEEUG00000014515	CHD9	86	96.133	Erinaceus_europaeus
ENSMLUG00000004456	CHD9	74	75.260	ENSELUG00000006031	chd9	93	74.744	Esox_lucius
ENSMLUG00000004456	CHD9	100	94.450	ENSFCAG00000022534	CHD9	100	98.901	Felis_catus
ENSMLUG00000004456	CHD9	83	86.583	ENSFALG00000013276	CHD9	99	86.792	Ficedula_albicollis
ENSMLUG00000004456	CHD9	100	93.933	ENSFDAG00000021037	CHD9	100	93.795	Fukomys_damarensis
ENSMLUG00000004456	CHD9	84	69.705	ENSFHEG00000006068	chd9	94	68.981	Fundulus_heteroclitus
ENSMLUG00000004456	CHD9	67	76.866	ENSGMOG00000006040	chd9	83	76.934	Gadus_morhua
ENSMLUG00000004456	CHD9	96	84.396	ENSGALG00000039178	CHD9	99	84.098	Gallus_gallus
ENSMLUG00000004456	CHD9	84	69.631	ENSGAFG00000010014	chd9	67	74.509	Gambusia_affinis
ENSMLUG00000004456	CHD9	81	66.488	ENSGACG00000016694	chd9	96	74.832	Gasterosteus_aculeatus
ENSMLUG00000004456	CHD9	100	93.522	ENSGGOG00000014816	CHD9	100	98.535	Gorilla_gorilla
ENSMLUG00000004456	CHD9	79	70.506	ENSHBUG00000023322	chd9	96	70.280	Haplochromis_burtoni
ENSMLUG00000004456	CHD9	100	93.244	ENSHGLG00000014938	CHD9	99	96.416	Heterocephalus_glaber_female
ENSMLUG00000004456	CHD9	90	65.756	ENSHCOG00000000937	chd9	67	74.440	Hippocampus_comes
ENSMLUG00000004456	CHD9	82	69.056	ENSIPUG00000016448	chd9	97	73.358	Ictalurus_punctatus
ENSMLUG00000004456	CHD9	100	93.931	ENSSTOG00000022273	CHD9	99	96.416	Ictidomys_tridecemlineatus
ENSMLUG00000004456	CHD9	69	91.555	ENSJJAG00000015741	-	100	91.903	Jaculus_jaculus
ENSMLUG00000004456	CHD9	84	69.139	ENSKMAG00000016784	chd9	66	74.732	Kryptolebias_marmoratus
ENSMLUG00000004456	CHD9	79	68.643	ENSLBEG00000012077	chd9	65	75.182	Labrus_bergylta
ENSMLUG00000004456	CHD9	99	71.801	ENSLACG00000005557	CHD9	73	72.276	Latimeria_chalumnae
ENSMLUG00000004456	CHD9	87	72.613	ENSLOCG00000007225	chd9	68	80.072	Lepisosteus_oculatus
ENSMLUG00000004456	CHD9	100	93.903	ENSLAFG00000015374	CHD9	100	94.247	Loxodonta_africana
ENSMLUG00000004456	CHD9	100	93.558	ENSMFAG00000041354	CHD9	100	98.168	Macaca_fascicularis
ENSMLUG00000004456	CHD9	100	93.593	ENSMMUG00000016310	CHD9	100	98.168	Macaca_mulatta
ENSMLUG00000004456	CHD9	100	93.526	ENSMNEG00000031494	CHD9	100	94.302	Macaca_nemestrina
ENSMLUG00000004456	CHD9	100	93.593	ENSMLEG00000043219	CHD9	100	98.168	Mandrillus_leucophaeus
ENSMLUG00000004456	CHD9	78	70.039	ENSMAMG00000003909	chd9	99	60.343	Mastacembelus_armatus
ENSMLUG00000004456	CHD9	84	70.403	ENSMZEG00005006581	chd9	67	75.194	Maylandia_zebra
ENSMLUG00000004456	CHD9	95	79.010	ENSMGAG00000004642	CHD9	72	80.605	Meleagris_gallopavo
ENSMLUG00000004456	CHD9	100	93.657	ENSMICG00000016679	CHD9	100	97.436	Microcebus_murinus
ENSMLUG00000004456	CHD9	73	81.174	ENSMODG00000013142	-	99	91.945	Monodelphis_domestica
ENSMLUG00000004456	CHD9	79	69.030	ENSMALG00000013306	chd9	73	62.347	Monopterus_albus
ENSMLUG00000004456	CHD9	99	90.038	MGP_CAROLIEiJ_G0031364	Chd9	99	89.587	Mus_caroli
ENSMLUG00000004456	CHD9	99	89.649	ENSMUSG00000056608	Chd9	99	93.873	Mus_musculus
ENSMLUG00000004456	CHD9	99	88.350	MGP_PahariEiJ_G0022964	Chd9	99	87.899	Mus_pahari
ENSMLUG00000004456	CHD9	99	89.684	MGP_SPRETEiJ_G0032483	Chd9	99	89.232	Mus_spretus
ENSMLUG00000004456	CHD9	100	94.278	ENSMPUG00000003285	CHD9	100	94.554	Mustela_putorius_furo
ENSMLUG00000004456	CHD9	84	70.176	ENSNBRG00000009423	chd9	67	75.060	Neolamprologus_brichardi
ENSMLUG00000004456	CHD9	90	93.944	ENSNLEG00000001026	CHD9	100	94.366	Nomascus_leucogenys
ENSMLUG00000004456	CHD9	76	96.078	ENSMEUG00000008222	-	84	96.078	Notamacropus_eugenii
ENSMLUG00000004456	CHD9	85	98.000	ENSOPRG00000011168	CHD9	85	98.000	Ochotona_princeps
ENSMLUG00000004456	CHD9	99	93.301	ENSODEG00000004466	CHD9	99	92.919	Octodon_degus
ENSMLUG00000004456	CHD9	80	70.372	ENSONIG00000002816	chd9	87	62.578	Oreochromis_niloticus
ENSMLUG00000004456	CHD9	100	86.235	ENSOANG00000013401	CHD9	100	86.373	Ornithorhynchus_anatinus
ENSMLUG00000004456	CHD9	83	95.240	ENSOCUG00000001016	CHD9	99	95.240	Oryctolagus_cuniculus
ENSMLUG00000004456	CHD9	84	69.067	ENSORLG00000013810	chd9	97	60.487	Oryzias_latipes
ENSMLUG00000004456	CHD9	84	69.569	ENSORLG00015019126	chd9	94	68.822	Oryzias_latipes_hsok
ENSMLUG00000004456	CHD9	100	93.524	ENSOGAG00000002110	CHD9	100	93.145	Otolemur_garnettii
ENSMLUG00000004456	CHD9	100	93.769	ENSOARG00000017664	CHD9	100	94.114	Ovis_aries
ENSMLUG00000004456	CHD9	83	93.112	ENSPPAG00000039388	-	100	93.568	Pan_paniscus
ENSMLUG00000004456	CHD9	100	94.347	ENSPPRG00000004801	CHD9	100	98.535	Panthera_pardus
ENSMLUG00000004456	CHD9	100	93.347	ENSPTIG00000021854	CHD9	100	93.692	Panthera_tigris_altaica
ENSMLUG00000004456	CHD9	100	93.899	ENSPTRG00000008113	CHD9	100	98.535	Pan_troglodytes
ENSMLUG00000004456	CHD9	100	93.627	ENSPANG00000019307	CHD9	100	98.168	Papio_anubis
ENSMLUG00000004456	CHD9	98	59.371	ENSPKIG00000025401	-	71	63.417	Paramormyrops_kingsleyae
ENSMLUG00000004456	CHD9	97	62.734	ENSPKIG00000021876	chd9	68	77.121	Paramormyrops_kingsleyae
ENSMLUG00000004456	CHD9	64	84.811	ENSPSIG00000008099	CHD9	99	84.811	Pelodiscus_sinensis
ENSMLUG00000004456	CHD9	59	56.472	ENSPMAG00000006035	-	72	67.607	Petromyzon_marinus
ENSMLUG00000004456	CHD9	89	86.957	ENSPCIG00000017215	CHD9	97	89.524	Phascolarctos_cinereus
ENSMLUG00000004456	CHD9	84	69.518	ENSPFOG00000015839	chd9	66	71.285	Poecilia_formosa
ENSMLUG00000004456	CHD9	84	69.698	ENSPLAG00000011118	chd9	66	74.716	Poecilia_latipinna
ENSMLUG00000004456	CHD9	84	69.821	ENSPMEG00000015106	chd9	64	70.910	Poecilia_mexicana
ENSMLUG00000004456	CHD9	84	70.029	ENSPREG00000006473	chd9	98	67.818	Poecilia_reticulata
ENSMLUG00000004456	CHD9	100	93.761	ENSPPYG00000007348	CHD9	100	94.140	Pongo_abelii
ENSMLUG00000004456	CHD9	77	95.037	ENSPCAG00000007564	CHD9	86	95.037	Procavia_capensis
ENSMLUG00000004456	CHD9	100	92.692	ENSPCOG00000028433	CHD9	100	98.535	Propithecus_coquereli
ENSMLUG00000004456	CHD9	97	92.788	ENSPVAG00000015617	CHD9	98	92.844	Pteropus_vampyrus
ENSMLUG00000004456	CHD9	84	70.428	ENSPNYG00000010947	chd9	66	75.060	Pundamilia_nyererei
ENSMLUG00000004456	CHD9	86	67.555	ENSPNAG00000024141	chd9	68	75.404	Pygocentrus_nattereri
ENSMLUG00000004456	CHD9	90	86.802	ENSRNOG00000049302	Chd9	100	89.079	Rattus_norvegicus
ENSMLUG00000004456	CHD9	83	93.877	ENSRBIG00000035553	CHD9	100	98.168	Rhinopithecus_bieti
ENSMLUG00000004456	CHD9	82	93.904	ENSRROG00000033278	CHD9	100	98.168	Rhinopithecus_roxellana
ENSMLUG00000004456	CHD9	100	94.037	ENSSBOG00000030240	CHD9	100	97.436	Saimiri_boliviensis_boliviensis
ENSMLUG00000004456	CHD9	99	87.288	ENSSHAG00000002719	CHD9	100	87.307	Sarcophilus_harrisii
ENSMLUG00000004456	CHD9	86	67.202	ENSSFOG00015001327	chd9	67	76.266	Scleropages_formosus
ENSMLUG00000004456	CHD9	81	70.774	ENSSFOG00015020209	chd9	99	62.301	Scleropages_formosus
ENSMLUG00000004456	CHD9	84	68.439	ENSSMAG00000008953	chd9	99	62.332	Scophthalmus_maximus
ENSMLUG00000004456	CHD9	79	69.853	ENSSDUG00000006139	chd9	65	75.881	Seriola_dumerili
ENSMLUG00000004456	CHD9	79	70.297	ENSSLDG00000017818	chd9	65	75.942	Seriola_lalandi_dorsalis
ENSMLUG00000004456	CHD9	71	97.003	ENSSARG00000010632	CHD9	71	97.003	Sorex_araneus
ENSMLUG00000004456	CHD9	83	70.654	ENSSPAG00000021649	chd9	67	74.478	Stegastes_partitus
ENSMLUG00000004456	CHD9	99	92.380	ENSSSCG00000033591	CHD9	75	95.927	Sus_scrofa
ENSMLUG00000004456	CHD9	90	84.665	ENSTGUG00000007476	CHD9	100	84.742	Taeniopygia_guttata
ENSMLUG00000004456	CHD9	60	75.858	ENSTRUG00000009125	chd9	99	60.714	Takifugu_rubripes
ENSMLUG00000004456	CHD9	57	81.951	ENSTNIG00000003825	chd9	85	81.951	Tetraodon_nigroviridis
ENSMLUG00000004456	CHD9	66	92.342	ENSTBEG00000016052	-	81	92.342	Tupaia_belangeri
ENSMLUG00000004456	CHD9	90	93.829	ENSTTRG00000012674	CHD9	90	94.251	Tursiops_truncatus
ENSMLUG00000004456	CHD9	64	91.966	ENSUAMG00000022706	CHD9	100	99.267	Ursus_americanus
ENSMLUG00000004456	CHD9	90	92.361	ENSUMAG00000004043	CHD9	99	97.868	Ursus_maritimus
ENSMLUG00000004456	CHD9	97	94.372	ENSVPAG00000001374	CHD9	97	94.372	Vicugna_pacos
ENSMLUG00000004456	CHD9	100	94.659	ENSVVUG00000019435	CHD9	100	94.969	Vulpes_vulpes
ENSMLUG00000004456	CHD9	99	73.085	ENSXETG00000000349	chd9	96	76.797	Xenopus_tropicalis
ENSMLUG00000004456	CHD9	79	70.571	ENSXCOG00000012997	chd9	67	74.851	Xiphophorus_couchianus
ENSMLUG00000004456	CHD9	84	70.034	ENSXMAG00000016192	chd9	67	75.852	Xiphophorus_maculatus