EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000004684 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 5170 bases
Position: chrGL430518:239016-244185
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000004260	ResIII	PF04851.15	5.3e-07	1	1
ENSMLUP00000004260	DEAD	PF00270.29	1.1e-49	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000004681	-	1116	XM_006106019	ENSMLUP00000004260	372 (aa)	-	G1P2Z4

Gene Model

Click here to download ENSMLUG00000004684's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000004684's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000004684	-	90	34.493	ENSMLUG00000017604	-	52	34.493
ENSMLUG00000004684	-	90	30.172	ENSMLUG00000024480	-	69	30.460
ENSMLUG00000004684	-	87	32.622	ENSMLUG00000013151	DDX17	50	32.622
ENSMLUG00000004684	-	94	30.857	ENSMLUG00000003671	DDX6	70	30.857
ENSMLUG00000004684	-	76	30.323	ENSMLUG00000001265	-	51	30.323
ENSMLUG00000004684	-	91	36.628	ENSMLUG00000012159	DDX49	70	36.628
ENSMLUG00000004684	-	90	31.751	ENSMLUG00000012233	-	80	31.751
ENSMLUG00000004684	-	90	32.558	ENSMLUG00000022321	-	53	32.558
ENSMLUG00000004684	-	83	30.968	ENSMLUG00000009585	-	87	30.968
ENSMLUG00000004684	-	90	30.612	ENSMLUG00000001645	DDX10	50	30.612
ENSMLUG00000004684	-	90	33.333	ENSMLUG00000006610	DDX41	55	33.333
ENSMLUG00000004684	-	90	33.038	ENSMLUG00000003163	DDX47	72	33.038
ENSMLUG00000004684	-	86	34.769	ENSMLUG00000016730	DDX59	53	34.769
ENSMLUG00000004684	-	90	32.164	ENSMLUG00000022233	-	55	32.164

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000004684	-	100	93.548	ENSG00000123064	DDX54	100	94.231	Homo_sapiens
ENSMLUG00000004684	-	51	81.347	ENSAPOG00000017587	-	88	81.347	Acanthochromis_polyacanthus
ENSMLUG00000004684	-	97	67.222	ENSCSAVG00000008916	-	98	66.766	Ciona_savignyi
ENSMLUG00000004684	-	99	71.935	ENSEBUG00000008886	ddx54	51	71.935	Eptatretus_burgeri
ENSMLUG00000004684	-	99	81.081	ENSNBRG00000005588	ddx54	75	55.068	Neolamprologus_brichardi
ENSMLUG00000004684	-	51	90.000	ENSOANG00000028872	-	66	90.000	Ornithorhynchus_anatinus
ENSMLUG00000004684	-	94	84.571	ENSPSIG00000005055	DDX54	71	84.571	Pelodiscus_sinensis
ENSMLUG00000004684	-	99	76.022	ENSPMAG00000004337	ddx54	91	76.022	Petromyzon_marinus
ENSMLUG00000004684	-	100	93.280	ENSUMAG00000010245	DDX54	51	92.697	Ursus_maritimus