EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000005414 (Gene tree)
Gene ID: 102427204
Gene Symbol: PARN
Alias: DAN
Full Name: poly(A)-specific ribonuclease PARN
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 63364 bases
Position: chrGL430418:240664-304027
Accession: 102427204
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000004946	R3H	PF01424.22	2.7e-05	1	1
ENSMLUP00000004946	RNA_bind	PF08675.11	2.5e-26	1	1
ENSMLUP00000004946	CAF1	PF04857.20	2.4e-89	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000005421	PARN-201	1482	XM_006105219	ENSMLUP00000004946	494 (aa)	XP_023602053	G1P4Q5

Gene Model

Click here to download ENSMLUG00000005414's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000005414's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000005414	PARN	100	94.737	ENSG00000140694	PARN	91	94.915	Homo_sapiens
ENSMLUG00000005414	PARN	100	95.344	ENSAMEG00000011208	PARN	77	95.344	Ailuropoda_melanoleuca
ENSMLUG00000005414	PARN	100	75.354	ENSACIG00000000619	parn	91	64.384	Amphilophus_citrinellus
ENSMLUG00000005414	PARN	100	78.788	ENSAOCG00000003465	parn	72	78.788	Amphiprion_ocellaris
ENSMLUG00000005414	PARN	88	78.802	ENSAPEG00000010661	parn	83	78.802	Amphiprion_percula
ENSMLUG00000005414	PARN	100	79.192	ENSATEG00000004661	parn	72	79.192	Anabas_testudineus
ENSMLUG00000005414	PARN	99	88.139	ENSAPLG00000013914	PARN	77	88.139	Anas_platyrhynchos
ENSMLUG00000005414	PARN	100	85.455	ENSACAG00000004973	PARN	76	85.455	Anolis_carolinensis
ENSMLUG00000005414	PARN	100	93.927	ENSANAG00000031516	PARN	91	94.915	Aotus_nancymaae
ENSMLUG00000005414	PARN	100	78.586	ENSACLG00000004742	parn	73	78.586	Astatotilapia_calliptera
ENSMLUG00000005414	PARN	100	78.543	ENSAMXG00000012390	parn	80	76.113	Astyanax_mexicanus
ENSMLUG00000005414	PARN	100	91.093	ENSBTAG00000018097	PARN	75	94.688	Bos_taurus
ENSMLUG00000005414	PARN	100	94.332	ENSCJAG00000015866	PARN	91	94.915	Callithrix_jacchus
ENSMLUG00000005414	PARN	100	93.927	ENSCAFG00000018795	PARN	77	93.927	Canis_familiaris
ENSMLUG00000005414	PARN	100	93.927	ENSCAFG00020024126	PARN	77	93.927	Canis_lupus_dingo
ENSMLUG00000005414	PARN	100	95.142	ENSCHIG00000018143	PARN	77	95.142	Capra_hircus
ENSMLUG00000005414	PARN	95	62.526	ENSCAPG00000007984	PARN	78	62.526	Cavia_aperea
ENSMLUG00000005414	PARN	100	92.105	ENSCPOG00000002263	PARN	77	92.105	Cavia_porcellus
ENSMLUG00000005414	PARN	100	94.534	ENSCCAG00000030367	PARN	91	94.915	Cebus_capucinus
ENSMLUG00000005414	PARN	100	94.130	ENSCATG00000041368	PARN	88	94.130	Cercocebus_atys
ENSMLUG00000005414	PARN	67	36.111	ENSCATG00000033196	PNLDC1	70	36.111	Cercocebus_atys
ENSMLUG00000005414	PARN	100	92.713	ENSCLAG00000015406	PARN	77	92.713	Chinchilla_lanigera
ENSMLUG00000005414	PARN	100	94.534	ENSCSAG00000008142	PARN	77	94.534	Chlorocebus_sabaeus
ENSMLUG00000005414	PARN	88	81.755	ENSCHOG00000007014	PARN	71	81.755	Choloepus_hoffmanni
ENSMLUG00000005414	PARN	88	90.069	ENSCPBG00000006609	PARN	75	90.069	Chrysemys_picta_bellii
ENSMLUG00000005414	PARN	99	44.031	ENSCING00000010142	-	96	44.031	Ciona_intestinalis
ENSMLUG00000005414	PARN	100	79.684	ENSCANG00000028849	-	68	94.915	Colobus_angolensis_palliatus
ENSMLUG00000005414	PARN	96	30.000	ENSCGRG00001007470	-	86	30.000	Cricetulus_griseus_chok1gshd
ENSMLUG00000005414	PARN	100	88.664	ENSCGRG00001012096	Parn	78	88.664	Cricetulus_griseus_chok1gshd
ENSMLUG00000005414	PARN	96	30.000	ENSCGRG00000010221	-	86	30.000	Cricetulus_griseus_crigri
ENSMLUG00000005414	PARN	100	88.664	ENSCGRG00000004939	Parn	78	88.664	Cricetulus_griseus_crigri
ENSMLUG00000005414	PARN	100	75.960	ENSCSEG00000002064	parn	100	63.348	Cynoglossus_semilaevis
ENSMLUG00000005414	PARN	100	77.980	ENSCVAG00000014848	parn	72	77.980	Cyprinodon_variegatus
ENSMLUG00000005414	PARN	100	75.152	ENSDARG00000102634	parn	100	61.111	Danio_rerio
ENSMLUG00000005414	PARN	100	94.130	ENSDNOG00000000833	PARN	87	94.130	Dasypus_novemcinctus
ENSMLUG00000005414	PARN	85	92.395	ENSETEG00000014828	-	69	92.395	Echinops_telfairi
ENSMLUG00000005414	PARN	100	94.939	ENSEASG00005011400	PARN	77	94.939	Equus_asinus_asinus
ENSMLUG00000005414	PARN	100	94.534	ENSECAG00000017792	PARN	77	94.534	Equus_caballus
ENSMLUG00000005414	PARN	70	91.667	ENSEEUG00000010370	PARN	54	91.667	Erinaceus_europaeus
ENSMLUG00000005414	PARN	100	77.935	ENSELUG00000013139	parn	65	77.935	Esox_lucius
ENSMLUG00000005414	PARN	100	94.737	ENSFCAG00000044961	PARN	77	94.737	Felis_catus
ENSMLUG00000005414	PARN	99	87.474	ENSFALG00000003911	PARN	75	87.474	Ficedula_albicollis
ENSMLUG00000005414	PARN	75	30.491	ENSFALG00000012081	PNLDC1	70	30.491	Ficedula_albicollis
ENSMLUG00000005414	PARN	100	91.498	ENSFDAG00000009234	PARN	79	89.676	Fukomys_damarensis
ENSMLUG00000005414	PARN	100	70.040	ENSFHEG00000013738	parn	92	74.576	Fundulus_heteroclitus
ENSMLUG00000005414	PARN	100	76.768	ENSGMOG00000003231	parn	90	76.768	Gadus_morhua
ENSMLUG00000005414	PARN	100	88.259	ENSGALG00000003091	PARN	78	88.259	Gallus_gallus
ENSMLUG00000005414	PARN	100	77.576	ENSGAFG00000011061	parn	72	77.576	Gambusia_affinis
ENSMLUG00000005414	PARN	100	77.374	ENSGACG00000019501	parn	79	77.374	Gasterosteus_aculeatus
ENSMLUG00000005414	PARN	100	94.332	ENSGGOG00000025224	PARN	91	94.915	Gorilla_gorilla
ENSMLUG00000005414	PARN	100	78.586	ENSHBUG00000017906	parn	83	76.104	Haplochromis_burtoni
ENSMLUG00000005414	PARN	100	91.700	ENSHGLG00000010886	PARN	77	91.700	Heterocephalus_glaber_female
ENSMLUG00000005414	PARN	100	91.700	ENSHGLG00100014659	PARN	77	91.700	Heterocephalus_glaber_male
ENSMLUG00000005414	PARN	99	72.951	ENSHCOG00000008683	parn	83	72.951	Hippocampus_comes
ENSMLUG00000005414	PARN	100	65.385	ENSIPUG00000012401	parn	72	65.385	Ictalurus_punctatus
ENSMLUG00000005414	PARN	100	92.713	ENSSTOG00000007519	PARN	78	92.713	Ictidomys_tridecemlineatus
ENSMLUG00000005414	PARN	100	90.891	ENSJJAG00000023049	Parn	79	90.891	Jaculus_jaculus
ENSMLUG00000005414	PARN	100	77.778	ENSKMAG00000009462	parn	73	77.778	Kryptolebias_marmoratus
ENSMLUG00000005414	PARN	100	77.980	ENSLBEG00000009167	parn	77	77.980	Labrus_bergylta
ENSMLUG00000005414	PARN	99	78.980	ENSLACG00000004207	PARN	100	75.472	Latimeria_chalumnae
ENSMLUG00000005414	PARN	100	80.567	ENSLOCG00000000715	parn	72	80.567	Lepisosteus_oculatus
ENSMLUG00000005414	PARN	100	94.130	ENSLAFG00000015036	PARN	78	94.130	Loxodonta_africana
ENSMLUG00000005414	PARN	100	90.283	ENSMFAG00000044852	PARN	75	94.457	Macaca_fascicularis
ENSMLUG00000005414	PARN	100	94.332	ENSMMUG00000018849	PARN	77	94.332	Macaca_mulatta
ENSMLUG00000005414	PARN	100	94.534	ENSMNEG00000045108	PARN	77	94.534	Macaca_nemestrina
ENSMLUG00000005414	PARN	100	94.332	ENSMLEG00000031743	PARN	77	94.332	Mandrillus_leucophaeus
ENSMLUG00000005414	PARN	100	77.778	ENSMAMG00000006939	parn	72	77.778	Mastacembelus_armatus
ENSMLUG00000005414	PARN	100	78.586	ENSMZEG00005013590	parn	84	76.258	Maylandia_zebra
ENSMLUG00000005414	PARN	94	88.793	ENSMGAG00000001004	PARN	73	88.793	Meleagris_gallopavo
ENSMLUG00000005414	PARN	100	81.312	ENSMAUG00000008025	Parn	77	81.312	Mesocricetus_auratus
ENSMLUG00000005414	PARN	100	94.737	ENSMICG00000016053	PARN	91	96.610	Microcebus_murinus
ENSMLUG00000005414	PARN	100	88.259	ENSMOCG00000022211	Parn	99	88.259	Microtus_ochrogaster
ENSMLUG00000005414	PARN	100	76.566	ENSMMOG00000011333	parn	80	76.566	Mola_mola
ENSMLUG00000005414	PARN	100	91.935	ENSMODG00000004915	PARN	99	91.935	Monodelphis_domestica
ENSMLUG00000005414	PARN	100	78.629	ENSMALG00000019426	parn	84	78.629	Monopterus_albus
ENSMLUG00000005414	PARN	100	88.664	MGP_CAROLIEiJ_G0020466	Parn	78	88.664	Mus_caroli
ENSMLUG00000005414	PARN	100	88.664	ENSMUSG00000022685	Parn	100	90.244	Mus_musculus
ENSMLUG00000005414	PARN	66	30.514	ENSMUSG00000073460	Pnldc1	97	30.514	Mus_musculus
ENSMLUG00000005414	PARN	100	88.462	MGP_PahariEiJ_G0016172	Parn	78	88.462	Mus_pahari
ENSMLUG00000005414	PARN	100	88.664	MGP_SPRETEiJ_G0021361	Parn	78	88.664	Mus_spretus
ENSMLUG00000005414	PARN	100	95.142	ENSMPUG00000014464	PARN	77	95.142	Mustela_putorius_furo
ENSMLUG00000005414	PARN	100	75.758	ENSNBRG00000006805	parn	83	75.502	Neolamprologus_brichardi
ENSMLUG00000005414	PARN	100	94.534	ENSNLEG00000010241	PARN	91	94.915	Nomascus_leucogenys
ENSMLUG00000005414	PARN	94	65.801	ENSMEUG00000008178	-	73	65.801	Notamacropus_eugenii
ENSMLUG00000005414	PARN	99	87.680	ENSOPRG00000012187	PARN	77	87.680	Ochotona_princeps
ENSMLUG00000005414	PARN	100	83.702	ENSODEG00000001617	PARN	79	83.702	Octodon_degus
ENSMLUG00000005414	PARN	100	78.788	ENSONIG00000000151	parn	76	78.788	Oreochromis_niloticus
ENSMLUG00000005414	PARN	99	92.261	ENSOCUG00000000322	PARN	77	92.261	Oryctolagus_cuniculus
ENSMLUG00000005414	PARN	100	76.970	ENSORLG00020010313	parn	74	76.970	Oryzias_latipes_hni
ENSMLUG00000005414	PARN	100	76.768	ENSORLG00015000300	parn	74	76.768	Oryzias_latipes_hsok
ENSMLUG00000005414	PARN	100	76.768	ENSOMEG00000019555	parn	97	64.706	Oryzias_melastigma
ENSMLUG00000005414	PARN	100	90.121	ENSOGAG00000014626	PARN	100	90.121	Otolemur_garnettii
ENSMLUG00000005414	PARN	100	95.344	ENSOARG00000007574	PARN	100	95.344	Ovis_aries
ENSMLUG00000005414	PARN	100	94.534	ENSPPAG00000031438	PARN	91	94.915	Pan_paniscus
ENSMLUG00000005414	PARN	100	94.534	ENSPPRG00000018583	PARN	77	94.534	Panthera_pardus
ENSMLUG00000005414	PARN	100	94.737	ENSPTIG00000012135	PARN	77	94.737	Panthera_tigris_altaica
ENSMLUG00000005414	PARN	100	94.332	ENSPTRG00000007792	PARN	91	94.915	Pan_troglodytes
ENSMLUG00000005414	PARN	100	90.486	ENSPANG00000020099	PARN	77	90.283	Papio_anubis
ENSMLUG00000005414	PARN	100	77.530	ENSPKIG00000022807	parn	78	73.000	Paramormyrops_kingsleyae
ENSMLUG00000005414	PARN	52	30.916	ENSPSIG00000011419	PNLDC1	79	30.916	Pelodiscus_sinensis
ENSMLUG00000005414	PARN	100	89.676	ENSPSIG00000014804	PARN	77	89.676	Pelodiscus_sinensis
ENSMLUG00000005414	PARN	100	75.758	ENSPMGG00000014431	parn	68	76.364	Periophthalmus_magnuspinnatus
ENSMLUG00000005414	PARN	100	86.032	ENSPEMG00000018439	Parn	78	86.032	Peromyscus_maniculatus_bairdii
ENSMLUG00000005414	PARN	100	67.807	ENSPMAG00000003956	parn	94	67.807	Petromyzon_marinus
ENSMLUG00000005414	PARN	86	83.645	ENSPCIG00000001259	PARN	91	89.831	Phascolarctos_cinereus
ENSMLUG00000005414	PARN	100	77.576	ENSPFOG00000012823	parn	72	77.576	Poecilia_formosa
ENSMLUG00000005414	PARN	100	77.778	ENSPLAG00000006395	parn	72	77.778	Poecilia_latipinna
ENSMLUG00000005414	PARN	100	77.778	ENSPMEG00000007711	parn	72	77.778	Poecilia_mexicana
ENSMLUG00000005414	PARN	100	77.374	ENSPREG00000000147	parn	72	77.374	Poecilia_reticulata
ENSMLUG00000005414	PARN	100	93.750	ENSPPYG00000007123	PARN	77	93.750	Pongo_abelii
ENSMLUG00000005414	PARN	88	86.239	ENSPCAG00000001741	PARN	72	86.239	Procavia_capensis
ENSMLUG00000005414	PARN	100	91.700	ENSPCOG00000019292	PARN	91	96.610	Propithecus_coquereli
ENSMLUG00000005414	PARN	99	90.965	ENSPVAG00000002547	PARN	77	90.965	Pteropus_vampyrus
ENSMLUG00000005414	PARN	100	78.586	ENSPNYG00000006835	parn	83	72.892	Pundamilia_nyererei
ENSMLUG00000005414	PARN	91	78.795	ENSPNAG00000018905	parn	74	78.795	Pygocentrus_nattereri
ENSMLUG00000005414	PARN	100	88.664	ENSRNOG00000002912	Parn	98	86.869	Rattus_norvegicus
ENSMLUG00000005414	PARN	66	30.514	ENSRNOG00000023140	Pnldc1	89	30.514	Rattus_norvegicus
ENSMLUG00000005414	PARN	100	92.510	ENSSBOG00000034726	PARN	77	92.510	Saimiri_boliviensis_boliviensis
ENSMLUG00000005414	PARN	81	30.097	ENSSHAG00000015192	PNLDC1	65	30.097	Sarcophilus_harrisii
ENSMLUG00000005414	PARN	85	90.215	ENSSHAG00000008493	PARN	94	90.215	Sarcophilus_harrisii
ENSMLUG00000005414	PARN	100	78.947	ENSSFOG00015014165	parn	82	77.328	Scleropages_formosus
ENSMLUG00000005414	PARN	100	76.364	ENSSMAG00000000685	parn	80	72.056	Scophthalmus_maximus
ENSMLUG00000005414	PARN	100	78.384	ENSSDUG00000014555	parn	72	78.384	Seriola_dumerili
ENSMLUG00000005414	PARN	88	92.874	ENSSARG00000014339	PARN	75	92.874	Sorex_araneus
ENSMLUG00000005414	PARN	100	89.271	ENSSPUG00000007719	PARN	77	89.271	Sphenodon_punctatus
ENSMLUG00000005414	PARN	57	30.662	ENSSPUG00000004627	PNLDC1	84	30.662	Sphenodon_punctatus
ENSMLUG00000005414	PARN	100	80.202	ENSSPAG00000007095	parn	80	74.545	Stegastes_partitus
ENSMLUG00000005414	PARN	100	94.737	ENSSSCG00000007878	PARN	69	94.737	Sus_scrofa
ENSMLUG00000005414	PARN	99	87.526	ENSTGUG00000004971	PARN	76	87.526	Taeniopygia_guttata
ENSMLUG00000005414	PARN	71	30.471	ENSTGUG00000011418	PNLDC1	69	30.471	Taeniopygia_guttata
ENSMLUG00000005414	PARN	100	79.192	ENSTNIG00000008252	parn	79	79.192	Tetraodon_nigroviridis
ENSMLUG00000005414	PARN	88	76.552	ENSTBEG00000010407	PARN	75	76.552	Tupaia_belangeri
ENSMLUG00000005414	PARN	99	93.634	ENSTTRG00000002843	PARN	77	93.634	Tursiops_truncatus
ENSMLUG00000005414	PARN	88	81.797	ENSUAMG00000008283	PARN	94	77.523	Ursus_americanus
ENSMLUG00000005414	PARN	100	94.737	ENSUMAG00000004527	PARN	77	94.737	Ursus_maritimus
ENSMLUG00000005414	PARN	99	89.938	ENSVPAG00000008968	PARN	79	89.938	Vicugna_pacos
ENSMLUG00000005414	PARN	100	94.534	ENSVVUG00000019509	PARN	77	94.534	Vulpes_vulpes
ENSMLUG00000005414	PARN	100	81.781	ENSXETG00000010994	parn	94	81.781	Xenopus_tropicalis
ENSMLUG00000005414	PARN	100	73.843	ENSXCOG00000015990	parn	83	73.589	Xiphophorus_couchianus
ENSMLUG00000005414	PARN	100	77.576	ENSXMAG00000014783	parn	72	77.576	Xiphophorus_maculatus