EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000005899 (Gene tree)
Gene ID: 102425471
Gene Symbol: DDX28
Alias: FLJ11282|MDDX28
Full Name: DEAD-box helicase 28
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 1614 bases
Position: chrGL430041:1275385-1276998
Accession: 102425471
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000020974	DEAD	PF00270.29	1.4e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000005896	DDX28-201	1614	XM_006099457	ENSMLUP00000020974	538 (aa)	XP_006099519	G1QB91

Gene Model

Click here to download ENSMLUG00000005899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000005899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000005899	DDX28	72	30.534	ENSMLUG00000012159	DDX49	75	30.025
ENSMLUG00000005899	DDX28	75	31.017	ENSMLUG00000017604	-	57	31.017
ENSMLUG00000005899	DDX28	66	32.591	ENSMLUG00000013151	DDX17	52	32.591
ENSMLUG00000005899	DDX28	66	32.312	ENSMLUG00000009496	DDX5	50	32.312
ENSMLUG00000005899	DDX28	72	34.615	ENSMLUG00000003163	DDX47	78	33.333
ENSMLUG00000005899	DDX28	67	31.733	ENSMLUG00000016730	DDX59	56	30.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000005899	DDX28	98	81.698	ENSG00000182810	DDX28	98	81.698	Homo_sapiens
ENSMLUG00000005899	DDX28	96	47.566	ENSAPOG00000000991	ddx28	91	47.566	Acanthochromis_polyacanthus
ENSMLUG00000005899	DDX28	98	83.019	ENSAMEG00000019426	DDX28	98	83.019	Ailuropoda_melanoleuca
ENSMLUG00000005899	DDX28	92	48.425	ENSACIG00000021615	ddx28	89	48.031	Amphilophus_citrinellus
ENSMLUG00000005899	DDX28	93	49.126	ENSAOCG00000004610	ddx28	88	49.126	Amphiprion_ocellaris
ENSMLUG00000005899	DDX28	93	49.219	ENSAPEG00000002143	ddx28	88	49.219	Amphiprion_percula
ENSMLUG00000005899	DDX28	94	49.805	ENSATEG00000018691	ddx28	90	49.416	Anabas_testudineus
ENSMLUG00000005899	DDX28	98	52.642	ENSACAG00000009755	DDX28	96	52.642	Anolis_carolinensis
ENSMLUG00000005899	DDX28	92	47.140	ENSACLG00000012984	ddx28	88	47.140	Astatotilapia_calliptera
ENSMLUG00000005899	DDX28	94	49.049	ENSAMXG00000005878	ddx28	91	49.049	Astyanax_mexicanus
ENSMLUG00000005899	DDX28	98	84.717	ENSBTAG00000004290	DDX28	97	84.717	Bos_taurus
ENSMLUG00000005899	DDX28	98	83.932	ENSCAFG00000020327	DDX28	99	83.932	Canis_familiaris
ENSMLUG00000005899	DDX28	98	83.932	ENSCAFG00020019785	DDX28	99	83.932	Canis_lupus_dingo
ENSMLUG00000005899	DDX28	95	85.352	ENSCHIG00000009658	DDX28	97	83.962	Capra_hircus
ENSMLUG00000005899	DDX28	96	79.191	ENSCPOG00000013746	DDX28	96	79.191	Cavia_porcellus
ENSMLUG00000005899	DDX28	98	81.887	ENSCSAG00000018472	DDX28	97	81.887	Chlorocebus_sabaeus
ENSMLUG00000005899	DDX28	89	58.178	ENSCPBG00000012105	DDX28	84	60.000	Chrysemys_picta_bellii
ENSMLUG00000005899	DDX28	67	41.192	ENSCSAVG00000006341	-	93	40.650	Ciona_savignyi
ENSMLUG00000005899	DDX28	97	78.817	ENSCGRG00001024412	Ddx28	100	79.198	Cricetulus_griseus_chok1gshd
ENSMLUG00000005899	DDX28	96	46.578	ENSCSEG00000011651	ddx28	91	46.578	Cynoglossus_semilaevis
ENSMLUG00000005899	DDX28	97	49.156	ENSCVAG00000004044	ddx28	93	49.156	Cyprinodon_variegatus
ENSMLUG00000005899	DDX28	92	49.105	ENSDARG00000060411	ddx28	88	49.105	Danio_rerio
ENSMLUG00000005899	DDX28	66	86.034	ENSDNOG00000033593	DDX28	97	86.034	Dasypus_novemcinctus
ENSMLUG00000005899	DDX28	98	77.736	ENSDORG00000028868	Ddx28	98	77.736	Dipodomys_ordii
ENSMLUG00000005899	DDX28	87	35.343	FBgn0086130	Dbp21E2	87	35.197	Drosophila_melanogaster
ENSMLUG00000005899	DDX28	95	80.078	ENSETEG00000001062	-	95	80.078	Echinops_telfairi
ENSMLUG00000005899	DDX28	77	44.792	ENSEBUG00000004791	ddx28	80	45.078	Eptatretus_burgeri
ENSMLUG00000005899	DDX28	98	84.906	ENSEASG00005020387	DDX28	98	84.906	Equus_asinus_asinus
ENSMLUG00000005899	DDX28	98	85.472	ENSECAG00000006451	DDX28	98	85.472	Equus_caballus
ENSMLUG00000005899	DDX28	78	72.792	ENSEEUG00000005017	DDX28	98	72.792	Erinaceus_europaeus
ENSMLUG00000005899	DDX28	92	51.181	ENSELUG00000005302	ddx28	95	51.181	Esox_lucius
ENSMLUG00000005899	DDX28	98	82.830	ENSFCAG00000012858	DDX28	98	82.830	Felis_catus
ENSMLUG00000005899	DDX28	94	50.290	ENSFHEG00000012573	ddx28	91	50.290	Fundulus_heteroclitus
ENSMLUG00000005899	DDX28	94	47.683	ENSGMOG00000017045	ddx28	96	47.297	Gadus_morhua
ENSMLUG00000005899	DDX28	94	51.533	ENSGALG00000048700	DDX28	89	51.136	Gallus_gallus
ENSMLUG00000005899	DDX28	95	48.473	ENSGAFG00000009249	ddx28	89	49.509	Gambusia_affinis
ENSMLUG00000005899	DDX28	98	47.486	ENSGACG00000016367	ddx28	98	47.486	Gasterosteus_aculeatus
ENSMLUG00000005899	DDX28	78	58.685	ENSGAGG00000004565	DDX28	92	58.685	Gopherus_agassizii
ENSMLUG00000005899	DDX28	98	82.075	ENSGGOG00000001220	DDX28	98	82.075	Gorilla_gorilla
ENSMLUG00000005899	DDX28	92	48.915	ENSHBUG00000001016	ddx28	89	48.915	Haplochromis_burtoni
ENSMLUG00000005899	DDX28	94	45.543	ENSHCOG00000017590	ddx28	92	45.155	Hippocampus_comes
ENSMLUG00000005899	DDX28	92	49.803	ENSIPUG00000017350	Ddx28	88	49.409	Ictalurus_punctatus
ENSMLUG00000005899	DDX28	98	80.000	ENSSTOG00000002064	DDX28	98	80.000	Ictidomys_tridecemlineatus
ENSMLUG00000005899	DDX28	98	78.759	ENSJJAG00000012460	-	98	78.759	Jaculus_jaculus
ENSMLUG00000005899	DDX28	96	47.909	ENSKMAG00000018183	ddx28	92	47.909	Kryptolebias_marmoratus
ENSMLUG00000005899	DDX28	93	48.419	ENSLBEG00000006072	ddx28	89	48.024	Labrus_bergylta
ENSMLUG00000005899	DDX28	92	54.291	ENSLACG00000005578	DDX28	86	54.291	Latimeria_chalumnae
ENSMLUG00000005899	DDX28	97	50.560	ENSLOCG00000017604	ddx28	94	49.538	Lepisosteus_oculatus
ENSMLUG00000005899	DDX28	98	80.755	ENSLAFG00000031239	DDX28	98	80.755	Loxodonta_africana
ENSMLUG00000005899	DDX28	98	81.509	ENSMMUG00000010836	DDX28	97	81.509	Macaca_mulatta
ENSMLUG00000005899	DDX28	92	48.521	ENSMAMG00000020220	ddx28	88	48.521	Mastacembelus_armatus
ENSMLUG00000005899	DDX28	92	49.112	ENSMZEG00005009292	ddx28	89	49.112	Maylandia_zebra
ENSMLUG00000005899	DDX28	96	70.328	ENSMICG00000012346	-	100	68.946	Microcebus_murinus
ENSMLUG00000005899	DDX28	98	80.189	ENSMOCG00000009815	Ddx28	98	80.189	Microtus_ochrogaster
ENSMLUG00000005899	DDX28	92	49.310	ENSMMOG00000000270	ddx28	90	49.310	Mola_mola
ENSMLUG00000005899	DDX28	95	69.650	ENSMODG00000005303	DDX28	94	69.826	Monodelphis_domestica
ENSMLUG00000005899	DDX28	96	47.458	ENSMALG00000008864	ddx28	92	47.842	Monopterus_albus
ENSMLUG00000005899	DDX28	98	77.170	MGP_CAROLIEiJ_G0031510	Ddx28	98	77.170	Mus_caroli
ENSMLUG00000005899	DDX28	98	78.491	ENSMUSG00000045538	Ddx28	98	78.491	Mus_musculus
ENSMLUG00000005899	DDX28	98	78.868	MGP_PahariEiJ_G0023110	Ddx28	98	78.868	Mus_pahari
ENSMLUG00000005899	DDX28	98	78.302	MGP_SPRETEiJ_G0032628	Ddx28	98	78.302	Mus_spretus
ENSMLUG00000005899	DDX28	75	81.886	ENSMPUG00000006915	DDX28	100	81.886	Mustela_putorius_furo
ENSMLUG00000005899	DDX28	95	80.078	ENSNGAG00000015762	Ddx28	98	78.908	Nannospalax_galili
ENSMLUG00000005899	DDX28	92	48.915	ENSNBRG00000001337	ddx28	90	48.915	Neolamprologus_brichardi
ENSMLUG00000005899	DDX28	92	49.112	ENSONIG00000020597	ddx28	89	49.112	Oreochromis_niloticus
ENSMLUG00000005899	DDX28	51	64.875	ENSOANG00000003551	-	96	64.875	Ornithorhynchus_anatinus
ENSMLUG00000005899	DDX28	98	79.434	ENSOCUG00000023074	DDX28	98	79.434	Oryctolagus_cuniculus
ENSMLUG00000005899	DDX28	94	48.833	ENSORLG00000011968	ddx28	91	48.833	Oryzias_latipes
ENSMLUG00000005899	DDX28	94	48.638	ENSORLG00020001951	ddx28	92	48.638	Oryzias_latipes_hni
ENSMLUG00000005899	DDX28	94	48.054	ENSORLG00015023030	ddx28	92	48.054	Oryzias_latipes_hsok
ENSMLUG00000005899	DDX28	94	48.549	ENSOMEG00000012445	ddx28	91	48.549	Oryzias_melastigma
ENSMLUG00000005899	DDX28	96	80.732	ENSOGAG00000016895	DDX28	98	80.226	Otolemur_garnettii
ENSMLUG00000005899	DDX28	81	82.299	ENSOARG00000003313	DDX28	98	82.299	Ovis_aries
ENSMLUG00000005899	DDX28	98	78.113	ENSPPAG00000036971	DDX28	98	78.113	Pan_paniscus
ENSMLUG00000005899	DDX28	98	83.962	ENSPPRG00000018322	DDX28	98	83.962	Panthera_pardus
ENSMLUG00000005899	DDX28	98	80.755	ENSPTIG00000006444	DDX28	98	80.755	Panthera_tigris_altaica
ENSMLUG00000005899	DDX28	98	81.509	ENSPTRG00000008258	DDX28	98	81.509	Pan_troglodytes
ENSMLUG00000005899	DDX28	92	50.794	ENSPKIG00000021200	ddx28	91	50.397	Paramormyrops_kingsleyae
ENSMLUG00000005899	DDX28	54	62.847	ENSPSIG00000001127	DDX28	94	62.847	Pelodiscus_sinensis
ENSMLUG00000005899	DDX28	98	44.144	ENSPMGG00000007908	ddx28	97	44.144	Periophthalmus_magnuspinnatus
ENSMLUG00000005899	DDX28	98	78.879	ENSPEMG00000003395	Ddx28	98	78.879	Peromyscus_maniculatus_bairdii
ENSMLUG00000005899	DDX28	51	49.638	ENSPMAG00000006983	DDX28	91	49.638	Petromyzon_marinus
ENSMLUG00000005899	DDX28	98	47.955	ENSPFOG00000020838	DDX28	94	47.955	Poecilia_formosa
ENSMLUG00000005899	DDX28	98	47.955	ENSPFOG00000020952	ddx28	92	47.955	Poecilia_formosa
ENSMLUG00000005899	DDX28	98	47.584	ENSPLAG00000016292	ddx28	92	47.584	Poecilia_latipinna
ENSMLUG00000005899	DDX28	98	47.955	ENSPMEG00000011311	ddx28	92	47.955	Poecilia_mexicana
ENSMLUG00000005899	DDX28	98	47.955	ENSPREG00000002899	ddx28	92	47.955	Poecilia_reticulata
ENSMLUG00000005899	DDX28	98	82.264	ENSPPYG00000007481	DDX28	99	82.264	Pongo_abelii
ENSMLUG00000005899	DDX28	98	82.863	ENSPCOG00000024632	DDX28	98	82.863	Propithecus_coquereli
ENSMLUG00000005899	DDX28	92	49.112	ENSPNYG00000018804	ddx28	89	49.112	Pundamilia_nyererei
ENSMLUG00000005899	DDX28	92	51.373	ENSPNAG00000014597	ddx28	93	51.181	Pygocentrus_nattereri
ENSMLUG00000005899	DDX28	98	77.170	ENSRNOG00000019817	Ddx28	98	77.170	Rattus_norvegicus
ENSMLUG00000005899	DDX28	94	50.000	ENSSFOG00015010181	ddx28	92	49.421	Scleropages_formosus
ENSMLUG00000005899	DDX28	91	49.301	ENSSMAG00000006831	ddx28	91	49.105	Scophthalmus_maximus
ENSMLUG00000005899	DDX28	92	48.323	ENSSDUG00000003257	ddx28	88	47.929	Seriola_dumerili
ENSMLUG00000005899	DDX28	98	46.369	ENSSLDG00000004513	ddx28	93	45.996	Seriola_lalandi_dorsalis
ENSMLUG00000005899	DDX28	98	81.698	ENSSARG00000014169	DDX28	98	81.698	Sorex_araneus
ENSMLUG00000005899	DDX28	97	48.120	ENSSPAG00000000988	ddx28	93	47.744	Stegastes_partitus
ENSMLUG00000005899	DDX28	98	85.094	ENSSSCG00000026038	DDX28	98	85.094	Sus_scrofa
ENSMLUG00000005899	DDX28	97	46.568	ENSTRUG00000007815	ddx28	97	46.939	Takifugu_rubripes
ENSMLUG00000005899	DDX28	92	48.898	ENSTNIG00000011352	ddx28	98	48.497	Tetraodon_nigroviridis
ENSMLUG00000005899	DDX28	85	88.517	ENSTBEG00000017695	DDX28	85	88.517	Tupaia_belangeri
ENSMLUG00000005899	DDX28	98	84.340	ENSUAMG00000016116	DDX28	98	84.340	Ursus_americanus
ENSMLUG00000005899	DDX28	80	85.315	ENSUMAG00000019200	DDX28	88	85.315	Ursus_maritimus
ENSMLUG00000005899	DDX28	86	76.759	ENSVVUG00000012876	DDX28	92	76.759	Vulpes_vulpes
ENSMLUG00000005899	DDX28	93	50.296	ENSXETG00000005435	ddx28	98	50.296	Xenopus_tropicalis
ENSMLUG00000005899	DDX28	98	48.141	ENSXCOG00000012364	ddx28	93	48.141	Xiphophorus_couchianus
ENSMLUG00000005899	DDX28	92	50.099	ENSXMAG00000019603	ddx28	90	50.099	Xiphophorus_maculatus