EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000006097 (Gene tree)
Gene ID: 102424684
Gene Symbol: PRDM5
Alias: PFM2
Full Name: PR/SET domain 5
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 65687 bases
Position: chrGL430503:193156-258842
Accession: 102424684
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000005570	zf-C2H2	PF00096.26	4.3e-52	1	7
ENSMLUP00000005570	zf-C2H2	PF00096.26	4.3e-52	2	7
ENSMLUP00000005570	zf-C2H2	PF00096.26	4.3e-52	3	7
ENSMLUP00000005570	zf-C2H2	PF00096.26	4.3e-52	4	7
ENSMLUP00000005570	zf-C2H2	PF00096.26	4.3e-52	5	7
ENSMLUP00000005570	zf-C2H2	PF00096.26	4.3e-52	6	7
ENSMLUP00000005570	zf-C2H2	PF00096.26	4.3e-52	7	7
ENSMLUP00000005570	zf-met	PF12874.7	7.3e-23	1	3
ENSMLUP00000005570	zf-met	PF12874.7	7.3e-23	2	3
ENSMLUP00000005570	zf-met	PF12874.7	7.3e-23	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000006101	PRDM5-201	1737	XM_006105925	ENSMLUP00000005570	578 (aa)	XP_006105987	G1P685

Gene Model

Click here to download ENSMLUG00000006097's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000006097's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000006097	PRDM5	80	33.711	ENSMLUG00000002894	ZNF454	76	33.711
ENSMLUG00000006097	PRDM5	93	33.867	ENSMLUG00000003693	-	82	33.867
ENSMLUG00000006097	PRDM5	81	41.818	ENSMLUG00000011089	ZNF236	62	41.818
ENSMLUG00000006097	PRDM5	62	34.559	ENSMLUG00000001086	SNAI2	52	34.532
ENSMLUG00000006097	PRDM5	82	32.152	ENSMLUG00000012039	ZNF317	72	32.152
ENSMLUG00000006097	PRDM5	81	30.660	ENSMLUG00000013051	PRDM10	54	30.660
ENSMLUG00000006097	PRDM5	81	35.467	ENSMLUG00000013784	ZNF235	70	35.467
ENSMLUG00000006097	PRDM5	80	32.959	ENSMLUG00000001576	-	100	32.959
ENSMLUG00000006097	PRDM5	80	36.420	ENSMLUG00000004199	-	99	36.420
ENSMLUG00000006097	PRDM5	80	32.653	ENSMLUG00000009276	-	87	32.500
ENSMLUG00000006097	PRDM5	76	39.286	ENSMLUG00000006256	ZNF770	55	39.286
ENSMLUG00000006097	PRDM5	78	33.058	ENSMLUG00000003468	-	99	33.058
ENSMLUG00000006097	PRDM5	79	32.517	ENSMLUG00000014654	ZNF112	59	33.156
ENSMLUG00000006097	PRDM5	81	34.226	ENSMLUG00000025202	ZBTB17	55	34.226
ENSMLUG00000006097	PRDM5	84	31.429	ENSMLUG00000009878	ZNF423	85	32.301
ENSMLUG00000006097	PRDM5	81	30.515	ENSMLUG00000002158	GTF3A	82	30.545
ENSMLUG00000006097	PRDM5	79	32.667	ENSMLUG00000001227	ZFP64	51	32.667
ENSMLUG00000006097	PRDM5	84	38.589	ENSMLUG00000002042	ZFP1	75	38.589
ENSMLUG00000006097	PRDM5	87	34.471	ENSMLUG00000015757	-	96	35.379
ENSMLUG00000006097	PRDM5	82	34.161	ENSMLUG00000011734	ZNF81	74	34.161
ENSMLUG00000006097	PRDM5	79	33.224	ENSMLUG00000002194	GZF1	51	30.726

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000006097	PRDM5	100	85.294	ENSG00000138738	PRDM5	91	85.294	Homo_sapiens
ENSMLUG00000006097	PRDM5	100	69.603	ENSAPOG00000023220	prdm5	91	69.603	Acanthochromis_polyacanthus
ENSMLUG00000006097	PRDM5	100	84.283	ENSAMEG00000003050	PRDM5	100	84.629	Ailuropoda_melanoleuca
ENSMLUG00000006097	PRDM5	98	69.825	ENSACIG00000000406	prdm5	91	69.825	Amphilophus_citrinellus
ENSMLUG00000006097	PRDM5	100	69.640	ENSAOCG00000014806	prdm5	91	69.640	Amphiprion_ocellaris
ENSMLUG00000006097	PRDM5	100	64.901	ENSAPEG00000016846	prdm5	90	64.901	Amphiprion_percula
ENSMLUG00000006097	PRDM5	100	70.719	ENSATEG00000013829	prdm5	91	70.890	Anabas_testudineus
ENSMLUG00000006097	PRDM5	100	76.248	ENSAPLG00000013828	PRDM5	96	76.248	Anas_platyrhynchos
ENSMLUG00000006097	PRDM5	100	71.799	ENSACAG00000012999	PRDM5	91	71.799	Anolis_carolinensis
ENSMLUG00000006097	PRDM5	100	90.312	ENSANAG00000027411	PRDM5	87	90.312	Aotus_nancymaae
ENSMLUG00000006097	PRDM5	100	69.603	ENSACLG00000017996	prdm5	90	69.603	Astatotilapia_calliptera
ENSMLUG00000006097	PRDM5	93	70.610	ENSAMXG00000041864	prdm5	99	70.980	Astyanax_mexicanus
ENSMLUG00000006097	PRDM5	100	85.467	ENSBTAG00000012111	PRDM5	91	85.467	Bos_taurus
ENSMLUG00000006097	PRDM5	100	90.312	ENSCJAG00000003133	PRDM5	87	90.312	Callithrix_jacchus
ENSMLUG00000006097	PRDM5	100	80.138	ENSCAFG00000004179	PRDM5	99	80.656	Canis_familiaris
ENSMLUG00000006097	PRDM5	100	86.332	ENSCAFG00020017685	PRDM5	91	86.332	Canis_lupus_dingo
ENSMLUG00000006097	PRDM5	100	84.256	ENSCHIG00000018772	PRDM5	91	84.256	Capra_hircus
ENSMLUG00000006097	PRDM5	99	83.588	ENSTSYG00000009630	PRDM5	90	83.588	Carlito_syrichta
ENSMLUG00000006097	PRDM5	100	80.379	ENSCAPG00000015217	PRDM5	100	82.468	Cavia_aperea
ENSMLUG00000006097	PRDM5	100	90.312	ENSCPOG00000012883	PRDM5	93	90.312	Cavia_porcellus
ENSMLUG00000006097	PRDM5	100	90.625	ENSCCAG00000023157	PRDM5	87	90.625	Cebus_capucinus
ENSMLUG00000006097	PRDM5	100	90.625	ENSCATG00000042510	PRDM5	87	90.625	Cercocebus_atys
ENSMLUG00000006097	PRDM5	100	90.000	ENSCLAG00000005392	PRDM5	93	90.000	Chinchilla_lanigera
ENSMLUG00000006097	PRDM5	100	81.661	ENSCSAG00000003729	PRDM5	91	81.661	Chlorocebus_sabaeus
ENSMLUG00000006097	PRDM5	100	79.310	ENSCHOG00000007801	PRDM5	81	79.310	Choloepus_hoffmanni
ENSMLUG00000006097	PRDM5	100	74.788	ENSCPBG00000024735	PRDM5	91	75.468	Chrysemys_picta_bellii
ENSMLUG00000006097	PRDM5	100	90.625	ENSCANG00000036807	PRDM5	87	90.625	Colobus_angolensis_palliatus
ENSMLUG00000006097	PRDM5	100	89.062	ENSCGRG00001010581	Prdm5	87	89.062	Cricetulus_griseus_chok1gshd
ENSMLUG00000006097	PRDM5	100	71.945	ENSCGRG00000010996	-	95	71.945	Cricetulus_griseus_crigri
ENSMLUG00000006097	PRDM5	100	69.060	ENSCSEG00000019979	prdm5	91	69.430	Cynoglossus_semilaevis
ENSMLUG00000006097	PRDM5	100	67.012	ENSCVAG00000013692	prdm5	91	67.012	Cyprinodon_variegatus
ENSMLUG00000006097	PRDM5	99	70.294	ENSDARG00000006288	prdm5	91	70.294	Danio_rerio
ENSMLUG00000006097	PRDM5	100	84.801	ENSDNOG00000002009	PRDM5	100	84.801	Dasypus_novemcinctus
ENSMLUG00000006097	PRDM5	100	89.375	ENSDORG00000007739	Prdm5	87	89.375	Dipodomys_ordii
ENSMLUG00000006097	PRDM5	96	80.682	ENSETEG00000020268	PRDM5	84	80.682	Echinops_telfairi
ENSMLUG00000006097	PRDM5	99	64.298	ENSEBUG00000004301	prdm5	91	64.645	Eptatretus_burgeri
ENSMLUG00000006097	PRDM5	100	90.938	ENSEASG00005018365	PRDM5	87	90.938	Equus_asinus_asinus
ENSMLUG00000006097	PRDM5	99	88.454	ENSECAG00000011516	PRDM5	81	88.454	Equus_caballus
ENSMLUG00000006097	PRDM5	100	72.072	ENSECAG00000024747	-	86	77.879	Equus_caballus
ENSMLUG00000006097	PRDM5	99	77.099	ENSEEUG00000010306	PRDM5	90	77.099	Erinaceus_europaeus
ENSMLUG00000006097	PRDM5	99	72.358	ENSELUG00000005894	prdm5	83	72.561	Esox_lucius
ENSMLUG00000006097	PRDM5	100	86.159	ENSFCAG00000025656	PRDM5	91	86.159	Felis_catus
ENSMLUG00000006097	PRDM5	99	69.057	ENSFALG00000008381	PRDM5	83	69.057	Ficedula_albicollis
ENSMLUG00000006097	PRDM5	100	90.312	ENSFDAG00000021361	PRDM5	87	90.312	Fukomys_damarensis
ENSMLUG00000006097	PRDM5	99	69.723	ENSFHEG00000013040	prdm5	90	69.723	Fundulus_heteroclitus
ENSMLUG00000006097	PRDM5	94	66.452	ENSGMOG00000012038	prdm5	100	55.208	Gadus_morhua
ENSMLUG00000006097	PRDM5	100	75.856	ENSGALG00000011963	PRDM5	91	75.856	Gallus_gallus
ENSMLUG00000006097	PRDM5	99	71.012	ENSGAFG00000019233	prdm5	88	71.206	Gambusia_affinis
ENSMLUG00000006097	PRDM5	99	75.532	ENSGAGG00000020362	PRDM5	88	76.395	Gopherus_agassizii
ENSMLUG00000006097	PRDM5	100	90.625	ENSGGOG00000013562	PRDM5	87	90.625	Gorilla_gorilla
ENSMLUG00000006097	PRDM5	100	69.430	ENSHBUG00000023375	prdm5	90	69.603	Haplochromis_burtoni
ENSMLUG00000006097	PRDM5	100	82.500	ENSHGLG00000003010	PRDM5	85	82.500	Heterocephalus_glaber_female
ENSMLUG00000006097	PRDM5	100	90.000	ENSHGLG00100003696	PRDM5	87	90.000	Heterocephalus_glaber_male
ENSMLUG00000006097	PRDM5	99	71.157	ENSHCOG00000012131	prdm5	91	71.330	Hippocampus_comes
ENSMLUG00000006097	PRDM5	100	71.897	ENSIPUG00000001248	prdm5	91	71.870	Ictalurus_punctatus
ENSMLUG00000006097	PRDM5	100	86.562	ENSSTOG00000004741	PRDM5	93	86.562	Ictidomys_tridecemlineatus
ENSMLUG00000006097	PRDM5	100	89.375	ENSJJAG00000011464	Prdm5	93	89.375	Jaculus_jaculus
ENSMLUG00000006097	PRDM5	100	67.966	ENSKMAG00000013663	prdm5	91	69.603	Kryptolebias_marmoratus
ENSMLUG00000006097	PRDM5	100	71.157	ENSLBEG00000022736	prdm5	91	71.330	Labrus_bergylta
ENSMLUG00000006097	PRDM5	100	75.433	ENSLACG00000009187	PRDM5	99	75.433	Latimeria_chalumnae
ENSMLUG00000006097	PRDM5	99	73.310	ENSLOCG00000009778	prdm5	91	73.310	Lepisosteus_oculatus
ENSMLUG00000006097	PRDM5	100	81.315	ENSLAFG00000006532	PRDM5	99	84.375	Loxodonta_africana
ENSMLUG00000006097	PRDM5	100	90.625	ENSMFAG00000045845	PRDM5	87	90.625	Macaca_fascicularis
ENSMLUG00000006097	PRDM5	100	90.625	ENSMMUG00000003249	PRDM5	87	90.625	Macaca_mulatta
ENSMLUG00000006097	PRDM5	100	90.625	ENSMNEG00000019018	PRDM5	87	90.625	Macaca_nemestrina
ENSMLUG00000006097	PRDM5	100	85.294	ENSMLEG00000023145	PRDM5	96	85.294	Mandrillus_leucophaeus
ENSMLUG00000006097	PRDM5	100	70.256	ENSMAMG00000013419	prdm5	91	70.377	Mastacembelus_armatus
ENSMLUG00000006097	PRDM5	100	69.430	ENSMZEG00005020645	prdm5	90	69.603	Maylandia_zebra
ENSMLUG00000006097	PRDM5	100	75.904	ENSMGAG00000010710	PRDM5	96	75.904	Meleagris_gallopavo
ENSMLUG00000006097	PRDM5	100	89.062	ENSMAUG00000006768	Prdm5	87	89.062	Mesocricetus_auratus
ENSMLUG00000006097	PRDM5	100	90.312	ENSMICG00000001459	PRDM5	87	90.312	Microcebus_murinus
ENSMLUG00000006097	PRDM5	100	89.062	ENSMOCG00000016267	Prdm5	87	89.062	Microtus_ochrogaster
ENSMLUG00000006097	PRDM5	100	68.912	ENSMMOG00000006035	prdm5	91	68.912	Mola_mola
ENSMLUG00000006097	PRDM5	100	72.931	ENSMODG00000018942	PRDM5	91	72.931	Monodelphis_domestica
ENSMLUG00000006097	PRDM5	100	66.321	ENSMALG00000013934	prdm5	90	67.012	Monopterus_albus
ENSMLUG00000006097	PRDM5	100	89.375	MGP_CAROLIEiJ_G0028463	Prdm5	87	89.375	Mus_caroli
ENSMLUG00000006097	PRDM5	100	89.062	ENSMUSG00000029913	Prdm5	87	89.062	Mus_musculus
ENSMLUG00000006097	PRDM5	100	89.375	MGP_PahariEiJ_G0022203	Prdm5	87	89.375	Mus_pahari
ENSMLUG00000006097	PRDM5	100	89.062	MGP_SPRETEiJ_G0029467	Prdm5	87	89.062	Mus_spretus
ENSMLUG00000006097	PRDM5	100	85.986	ENSMPUG00000017415	PRDM5	91	85.986	Mustela_putorius_furo
ENSMLUG00000006097	PRDM5	100	89.688	ENSNGAG00000018317	Prdm5	87	89.688	Nannospalax_galili
ENSMLUG00000006097	PRDM5	100	65.136	ENSNBRG00000004976	prdm5	90	65.136	Neolamprologus_brichardi
ENSMLUG00000006097	PRDM5	100	90.625	ENSNLEG00000009107	PRDM5	87	90.625	Nomascus_leucogenys
ENSMLUG00000006097	PRDM5	82	74.790	ENSMEUG00000006576	-	62	74.790	Notamacropus_eugenii
ENSMLUG00000006097	PRDM5	92	76.214	ENSOPRG00000011066	-	77	76.214	Ochotona_princeps
ENSMLUG00000006097	PRDM5	100	90.312	ENSODEG00000009133	PRDM5	87	90.312	Octodon_degus
ENSMLUG00000006097	PRDM5	100	71.184	ENSONIG00000003111	prdm5	91	71.184	Oreochromis_niloticus
ENSMLUG00000006097	PRDM5	58	56.198	ENSOANG00000006197	-	100	56.198	Ornithorhynchus_anatinus
ENSMLUG00000006097	PRDM5	99	72.451	ENSOANG00000015109	PRDM5	86	72.451	Ornithorhynchus_anatinus
ENSMLUG00000006097	PRDM5	100	82.353	ENSOCUG00000013454	PRDM5	98	82.353	Oryctolagus_cuniculus
ENSMLUG00000006097	PRDM5	100	69.430	ENSORLG00000016247	prdm5	90	69.603	Oryzias_latipes
ENSMLUG00000006097	PRDM5	100	69.430	ENSORLG00020018051	prdm5	90	69.775	Oryzias_latipes_hni
ENSMLUG00000006097	PRDM5	100	69.430	ENSORLG00015013760	prdm5	90	69.603	Oryzias_latipes_hsok
ENSMLUG00000006097	PRDM5	100	69.655	ENSOMEG00000005143	prdm5	91	69.828	Oryzias_melastigma
ENSMLUG00000006097	PRDM5	93	77.757	ENSOGAG00000009996	PRDM5	98	77.365	Otolemur_garnettii
ENSMLUG00000006097	PRDM5	99	86.593	ENSOARG00000015473	PRDM5	99	86.593	Ovis_aries
ENSMLUG00000006097	PRDM5	100	85.294	ENSPPAG00000043045	PRDM5	98	85.294	Pan_paniscus
ENSMLUG00000006097	PRDM5	100	85.986	ENSPPRG00000001020	PRDM5	91	85.986	Panthera_pardus
ENSMLUG00000006097	PRDM5	100	86.159	ENSPTIG00000010807	PRDM5	91	86.159	Panthera_tigris_altaica
ENSMLUG00000006097	PRDM5	100	90.625	ENSPTRG00000016403	PRDM5	87	90.625	Pan_troglodytes
ENSMLUG00000006097	PRDM5	100	90.625	ENSPANG00000023612	PRDM5	87	90.625	Papio_anubis
ENSMLUG00000006097	PRDM5	100	50.099	ENSPKIG00000015492	prdm5	90	50.690	Paramormyrops_kingsleyae
ENSMLUG00000006097	PRDM5	100	75.904	ENSPSIG00000013505	PRDM5	91	75.904	Pelodiscus_sinensis
ENSMLUG00000006097	PRDM5	100	66.667	ENSPMGG00000012622	prdm5	90	66.667	Periophthalmus_magnuspinnatus
ENSMLUG00000006097	PRDM5	79	64.904	ENSPMAG00000005248	prdm5	100	64.904	Petromyzon_marinus
ENSMLUG00000006097	PRDM5	98	63.739	ENSPFOG00000018630	prdm5	84	63.739	Poecilia_formosa
ENSMLUG00000006097	PRDM5	100	71.503	ENSPLAG00000014148	prdm5	91	71.503	Poecilia_latipinna
ENSMLUG00000006097	PRDM5	100	69.948	ENSPMEG00000018002	prdm5	90	69.948	Poecilia_mexicana
ENSMLUG00000006097	PRDM5	100	69.948	ENSPREG00000018366	prdm5	90	69.948	Poecilia_reticulata
ENSMLUG00000006097	PRDM5	100	85.294	ENSPPYG00000015031	PRDM5	91	85.294	Pongo_abelii
ENSMLUG00000006097	PRDM5	100	79.239	ENSPCAG00000011671	PRDM5	96	79.239	Procavia_capensis
ENSMLUG00000006097	PRDM5	100	90.312	ENSPCOG00000022828	PRDM5	87	90.312	Propithecus_coquereli
ENSMLUG00000006097	PRDM5	100	82.007	ENSPVAG00000012309	PRDM5	96	82.007	Pteropus_vampyrus
ENSMLUG00000006097	PRDM5	100	69.603	ENSPNYG00000012194	prdm5	90	69.603	Pundamilia_nyererei
ENSMLUG00000006097	PRDM5	99	68.566	ENSPNAG00000023191	-	98	68.566	Pygocentrus_nattereri
ENSMLUG00000006097	PRDM5	99	69.723	ENSPNAG00000026181	prdm5	90	69.723	Pygocentrus_nattereri
ENSMLUG00000006097	PRDM5	99	76.679	ENSRNOG00000023679	Prdm5	90	76.679	Rattus_norvegicus
ENSMLUG00000006097	PRDM5	100	90.625	ENSRBIG00000041307	PRDM5	87	90.625	Rhinopithecus_bieti
ENSMLUG00000006097	PRDM5	99	75.188	ENSRROG00000035343	PRDM5	95	74.740	Rhinopithecus_roxellana
ENSMLUG00000006097	PRDM5	100	90.625	ENSSBOG00000022100	PRDM5	87	90.625	Saimiri_boliviensis_boliviensis
ENSMLUG00000006097	PRDM5	98	75.410	ENSSHAG00000003250	PRDM5	100	75.615	Sarcophilus_harrisii
ENSMLUG00000006097	PRDM5	100	68.205	ENSSFOG00015020478	prdm5	91	68.205	Scleropages_formosus
ENSMLUG00000006097	PRDM5	100	70.890	ENSSMAG00000018844	prdm5	91	70.890	Scophthalmus_maximus
ENSMLUG00000006097	PRDM5	99	72.561	ENSSDUG00000020397	prdm5	91	69.603	Seriola_dumerili
ENSMLUG00000006097	PRDM5	100	69.430	ENSSLDG00000013353	prdm5	91	69.603	Seriola_lalandi_dorsalis
ENSMLUG00000006097	PRDM5	98	78.512	ENSSARG00000014129	-	66	78.512	Sorex_araneus
ENSMLUG00000006097	PRDM5	100	82.500	ENSSPUG00000009941	PRDM5	87	82.500	Sphenodon_punctatus
ENSMLUG00000006097	PRDM5	100	71.503	ENSSPAG00000013866	prdm5	91	71.330	Stegastes_partitus
ENSMLUG00000006097	PRDM5	100	86.678	ENSSSCG00000009101	PRDM5	95	82.872	Sus_scrofa
ENSMLUG00000006097	PRDM5	100	76.817	ENSTGUG00000001920	PRDM5	96	76.817	Taeniopygia_guttata
ENSMLUG00000006097	PRDM5	100	69.085	ENSTRUG00000013850	prdm5	91	69.085	Takifugu_rubripes
ENSMLUG00000006097	PRDM5	100	56.282	ENSTNIG00000005901	prdm5	91	56.282	Tetraodon_nigroviridis
ENSMLUG00000006097	PRDM5	100	82.059	ENSTBEG00000015386	PRDM5	82	82.059	Tupaia_belangeri
ENSMLUG00000006097	PRDM5	100	85.986	ENSTTRG00000010996	PRDM5	91	85.986	Tursiops_truncatus
ENSMLUG00000006097	PRDM5	98	82.437	ENSUAMG00000009994	PRDM5	82	82.437	Ursus_americanus
ENSMLUG00000006097	PRDM5	100	90.938	ENSUMAG00000003733	PRDM5	92	90.938	Ursus_maritimus
ENSMLUG00000006097	PRDM5	100	76.644	ENSVPAG00000007435	PRDM5	94	76.644	Vicugna_pacos
ENSMLUG00000006097	PRDM5	100	86.159	ENSVVUG00000013192	PRDM5	98	86.159	Vulpes_vulpes
ENSMLUG00000006097	PRDM5	100	71.330	ENSXETG00000002101	prdm5	91	70.984	Xenopus_tropicalis
ENSMLUG00000006097	PRDM5	100	69.603	ENSXCOG00000008567	prdm5	91	69.775	Xiphophorus_couchianus
ENSMLUG00000006097	PRDM5	99	70.817	ENSXMAG00000013825	prdm5	91	69.775	Xiphophorus_maculatus