EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000006135 (Gene tree)
Gene ID: 102419979
Gene Symbol: RPUSD3
Alias: MGC29784
Full Name: RNA pseudouridine synthase D3
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 7072 bases
Position: chrGL429775:15288382-15295453
Accession: 102419979
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000005602	PseudoU_synth_2	PF00849.22	5.5e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000006135	RPUSD3-201	1047	XM_006083866	ENSMLUP00000005602	348 (aa)	XP_006083928	G1P6B2

Gene Model

Click here to download ENSMLUG00000006135's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000006135's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000006135	RPUSD3	73	32.959	ENSMLUG00000029348	-	98	32.959
ENSMLUG00000006135	RPUSD3	79	34.146	ENSMLUG00000017328	-	71	34.146

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000006135	RPUSD3	99	84.257	ENSG00000156990	RPUSD3	97	84.257	Homo_sapiens
ENSMLUG00000006135	RPUSD3	99	82.370	ENSAMEG00000016227	RPUSD3	98	82.370	Ailuropoda_melanoleuca
ENSMLUG00000006135	RPUSD3	91	51.562	ENSACAG00000009836	RPUSD3	90	51.724	Anolis_carolinensis
ENSMLUG00000006135	RPUSD3	57	81.818	ENSANAG00000019945	-	79	81.818	Aotus_nancymaae
ENSMLUG00000006135	RPUSD3	77	58.363	ENSANAG00000007127	-	95	58.363	Aotus_nancymaae
ENSMLUG00000006135	RPUSD3	53	79.570	ENSANAG00000038118	-	89	79.570	Aotus_nancymaae
ENSMLUG00000006135	RPUSD3	99	80.523	ENSBTAG00000007968	RPUSD3	100	80.523	Bos_taurus
ENSMLUG00000006135	RPUSD3	99	83.188	ENSCAFG00000029733	RPUSD3	98	83.188	Canis_familiaris
ENSMLUG00000006135	RPUSD3	99	83.188	ENSCAFG00020008582	RPUSD3	98	83.188	Canis_lupus_dingo
ENSMLUG00000006135	RPUSD3	99	80.233	ENSCHIG00000026027	RPUSD3	100	80.233	Capra_hircus
ENSMLUG00000006135	RPUSD3	99	75.429	ENSTSYG00000009994	RPUSD3	99	75.429	Carlito_syrichta
ENSMLUG00000006135	RPUSD3	76	83.270	ENSCAPG00000017559	RPUSD3	99	83.270	Cavia_aperea
ENSMLUG00000006135	RPUSD3	88	76.066	ENSCPOG00000037956	RPUSD3	86	76.066	Cavia_porcellus
ENSMLUG00000006135	RPUSD3	99	81.214	ENSCCAG00000029530	RPUSD3	98	81.214	Cebus_capucinus
ENSMLUG00000006135	RPUSD3	99	83.673	ENSCATG00000036939	RPUSD3	97	83.673	Cercocebus_atys
ENSMLUG00000006135	RPUSD3	99	83.965	ENSCSAG00000010506	RPUSD3	98	83.526	Chlorocebus_sabaeus
ENSMLUG00000006135	RPUSD3	50	85.455	ENSCHOG00000010151	-	66	84.685	Choloepus_hoffmanni
ENSMLUG00000006135	RPUSD3	60	58.095	ENSCPBG00000008825	RPUSD3	95	55.253	Chrysemys_picta_bellii
ENSMLUG00000006135	RPUSD3	99	83.673	ENSCANG00000040711	RPUSD3	97	83.673	Colobus_angolensis_palliatus
ENSMLUG00000006135	RPUSD3	98	73.314	ENSCGRG00001004923	Rpusd3	95	72.674	Cricetulus_griseus_chok1gshd
ENSMLUG00000006135	RPUSD3	98	73.314	ENSCGRG00000018315	Rpusd3	100	72.674	Cricetulus_griseus_crigri
ENSMLUG00000006135	RPUSD3	99	77.233	ENSDNOG00000039160	RPUSD3	92	77.233	Dasypus_novemcinctus
ENSMLUG00000006135	RPUSD3	75	75.849	ENSDORG00000026827	Rpusd3	92	75.849	Dipodomys_ordii
ENSMLUG00000006135	RPUSD3	100	73.851	ENSETEG00000006538	RPUSD3	99	73.851	Echinops_telfairi
ENSMLUG00000006135	RPUSD3	59	37.379	ENSEBUG00000015605	RPUSD3	67	37.379	Eptatretus_burgeri
ENSMLUG00000006135	RPUSD3	99	82.948	ENSEASG00005014160	RPUSD3	96	82.948	Equus_asinus_asinus
ENSMLUG00000006135	RPUSD3	99	83.815	ENSECAG00000019988	RPUSD3	96	83.815	Equus_caballus
ENSMLUG00000006135	RPUSD3	98	61.605	ENSEEUG00000007353	RPUSD3	98	61.605	Erinaceus_europaeus
ENSMLUG00000006135	RPUSD3	99	84.104	ENSFCAG00000014199	RPUSD3	98	84.104	Felis_catus
ENSMLUG00000006135	RPUSD3	78	50.365	ENSFALG00000012968	RPUSD3	99	50.365	Ficedula_albicollis
ENSMLUG00000006135	RPUSD3	76	81.818	ENSFDAG00000008350	RPUSD3	81	81.818	Fukomys_damarensis
ENSMLUG00000006135	RPUSD3	75	55.894	ENSGAGG00000007493	RPUSD3	82	56.654	Gopherus_agassizii
ENSMLUG00000006135	RPUSD3	99	84.257	ENSGGOG00000013120	RPUSD3	97	84.257	Gorilla_gorilla
ENSMLUG00000006135	RPUSD3	80	81.786	ENSHGLG00000011722	RPUSD3	72	81.786	Heterocephalus_glaber_female
ENSMLUG00000006135	RPUSD3	80	81.786	ENSHGLG00100016038	RPUSD3	72	81.786	Heterocephalus_glaber_male
ENSMLUG00000006135	RPUSD3	99	77.168	ENSSTOG00000002125	RPUSD3	98	77.168	Ictidomys_tridecemlineatus
ENSMLUG00000006135	RPUSD3	99	71.802	ENSJJAG00000012679	Rpusd3	100	71.802	Jaculus_jaculus
ENSMLUG00000006135	RPUSD3	99	79.651	ENSLAFG00000017501	RPUSD3	100	79.651	Loxodonta_africana
ENSMLUG00000006135	RPUSD3	99	83.382	ENSMFAG00000032407	RPUSD3	97	83.382	Macaca_fascicularis
ENSMLUG00000006135	RPUSD3	99	79.300	ENSMMUG00000010628	RPUSD3	96	86.084	Macaca_mulatta
ENSMLUG00000006135	RPUSD3	99	83.090	ENSMNEG00000040308	RPUSD3	97	83.090	Macaca_nemestrina
ENSMLUG00000006135	RPUSD3	99	83.673	ENSMLEG00000033940	RPUSD3	97	83.673	Mandrillus_leucophaeus
ENSMLUG00000006135	RPUSD3	99	73.837	ENSMAUG00000015473	Rpusd3	100	73.837	Mesocricetus_auratus
ENSMLUG00000006135	RPUSD3	99	80.233	ENSMICG00000002315	RPUSD3	100	80.233	Microcebus_murinus
ENSMLUG00000006135	RPUSD3	99	73.256	ENSMOCG00000022613	Rpusd3	100	73.256	Microtus_ochrogaster
ENSMLUG00000006135	RPUSD3	97	57.270	ENSMODG00000005210	RPUSD3	88	57.270	Monodelphis_domestica
ENSMLUG00000006135	RPUSD3	99	72.384	MGP_CAROLIEiJ_G0028725	Rpusd3	100	72.384	Mus_caroli
ENSMLUG00000006135	RPUSD3	99	72.674	ENSMUSG00000051169	Rpusd3	100	72.674	Mus_musculus
ENSMLUG00000006135	RPUSD3	99	73.988	MGP_PahariEiJ_G0022476	Rpusd3	100	73.988	Mus_pahari
ENSMLUG00000006135	RPUSD3	99	72.384	MGP_SPRETEiJ_G0029753	Rpusd3	100	72.384	Mus_spretus
ENSMLUG00000006135	RPUSD3	99	80.580	ENSMPUG00000017132	RPUSD3	98	80.580	Mustela_putorius_furo
ENSMLUG00000006135	RPUSD3	98	73.314	ENSNGAG00000023704	Rpusd3	99	73.314	Nannospalax_galili
ENSMLUG00000006135	RPUSD3	99	69.971	ENSNLEG00000004214	RPUSD3	95	85.149	Nomascus_leucogenys
ENSMLUG00000006135	RPUSD3	75	65.517	ENSMEUG00000013098	-	100	65.517	Notamacropus_eugenii
ENSMLUG00000006135	RPUSD3	98	62.609	ENSOPRG00000002300	RPUSD3	98	62.609	Ochotona_princeps
ENSMLUG00000006135	RPUSD3	76	81.061	ENSODEG00000018137	RPUSD3	91	81.061	Octodon_degus
ENSMLUG00000006135	RPUSD3	82	51.408	ENSOANG00000012081	-	99	51.408	Ornithorhynchus_anatinus
ENSMLUG00000006135	RPUSD3	99	68.195	ENSOCUG00000027885	RPUSD3	100	68.195	Oryctolagus_cuniculus
ENSMLUG00000006135	RPUSD3	90	83.439	ENSOGAG00000012592	RPUSD3	100	83.439	Otolemur_garnettii
ENSMLUG00000006135	RPUSD3	100	81.034	ENSOARG00000005928	RPUSD3	99	81.034	Ovis_aries
ENSMLUG00000006135	RPUSD3	99	83.815	ENSPPAG00000038083	RPUSD3	98	83.815	Pan_paniscus
ENSMLUG00000006135	RPUSD3	99	84.682	ENSPPRG00000024433	RPUSD3	98	84.682	Panthera_pardus
ENSMLUG00000006135	RPUSD3	99	85.174	ENSPTIG00000006828	RPUSD3	100	85.174	Panthera_tigris_altaica
ENSMLUG00000006135	RPUSD3	99	83.526	ENSPTRG00000051760	RPUSD3	98	83.526	Pan_troglodytes
ENSMLUG00000006135	RPUSD3	99	83.965	ENSPANG00000023885	RPUSD3	98	83.526	Papio_anubis
ENSMLUG00000006135	RPUSD3	99	74.419	ENSPEMG00000017245	Rpusd3	100	74.419	Peromyscus_maniculatus_bairdii
ENSMLUG00000006135	RPUSD3	97	58.407	ENSPCIG00000021901	RPUSD3	96	58.407	Phascolarctos_cinereus
ENSMLUG00000006135	RPUSD3	99	84.393	ENSPPYG00000013676	RPUSD3	98	84.393	Pongo_abelii
ENSMLUG00000006135	RPUSD3	82	62.807	ENSPCAG00000013731	-	99	62.807	Procavia_capensis
ENSMLUG00000006135	RPUSD3	99	84.638	ENSPCOG00000018314	RPUSD3	98	84.638	Propithecus_coquereli
ENSMLUG00000006135	RPUSD3	99	82.081	ENSPVAG00000011107	RPUSD3	98	82.081	Pteropus_vampyrus
ENSMLUG00000006135	RPUSD3	99	67.733	ENSRNOG00000009084	Rpusd3	100	67.733	Rattus_norvegicus
ENSMLUG00000006135	RPUSD3	98	84.211	ENSRBIG00000041230	RPUSD3	97	84.211	Rhinopithecus_bieti
ENSMLUG00000006135	RPUSD3	99	84.257	ENSRROG00000043328	RPUSD3	97	84.257	Rhinopithecus_roxellana
ENSMLUG00000006135	RPUSD3	99	80.758	ENSSBOG00000036106	RPUSD3	97	80.758	Saimiri_boliviensis_boliviensis
ENSMLUG00000006135	RPUSD3	89	59.091	ENSSHAG00000015536	RPUSD3	99	59.091	Sarcophilus_harrisii
ENSMLUG00000006135	RPUSD3	98	83.918	ENSSSCG00000011555	RPUSD3	97	83.918	Sus_scrofa
ENSMLUG00000006135	RPUSD3	62	51.613	ENSTGUG00000008744	RPUSD3	95	50.901	Taeniopygia_guttata
ENSMLUG00000006135	RPUSD3	81	77.739	ENSTBEG00000000176	RPUSD3	98	77.739	Tupaia_belangeri
ENSMLUG00000006135	RPUSD3	99	81.449	ENSTTRG00000007544	RPUSD3	98	81.449	Tursiops_truncatus
ENSMLUG00000006135	RPUSD3	90	84.076	ENSUAMG00000011354	RPUSD3	98	84.076	Ursus_americanus
ENSMLUG00000006135	RPUSD3	99	83.237	ENSUMAG00000018830	RPUSD3	98	83.237	Ursus_maritimus
ENSMLUG00000006135	RPUSD3	99	83.721	ENSVVUG00000023735	RPUSD3	100	83.721	Vulpes_vulpes
ENSMLUG00000006135	RPUSD3	80	49.822	ENSXETG00000023546	rpusd3	99	49.822	Xenopus_tropicalis