EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000006324 (Gene tree)
Gene ID: 102430523
Gene Symbol: PABPC1L
Alias: C20orf119|PABPC1L1|dJ1069P2.3|ePAB
Full Name: poly(A) binding protein cytoplasmic 1 like
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 20650 bases
Position: chrGL429857:3869363-3890012
Accession: 15797
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000005780	PABP	PF00658.18	2.9e-27	1	1
ENSMLUP00000005780	RRM_5	PF13893.6	1.2e-07	1	1
ENSMLUP00000005780	RRM_1	PF00076.22	4.8e-86	1	4
ENSMLUP00000005780	RRM_1	PF00076.22	4.8e-86	2	4
ENSMLUP00000005780	RRM_1	PF00076.22	4.8e-86	3	4
ENSMLUP00000005780	RRM_1	PF00076.22	4.8e-86	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000006329	PABPC1L-201	1902	XM_006109943	ENSMLUP00000005780	634 (aa)	-	G1P6S4

Gene Model

Click here to download ENSMLUG00000006324's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000006324's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000006324	PABPC1L	98	62.179	ENSMLUG00000012068	PABPC4	97	62.179
ENSMLUG00000006324	PABPC1L	52	34.831	ENSMLUG00000016631	CELF1	65	34.831
ENSMLUG00000006324	PABPC1L	58	30.263	ENSMLUG00000006226	ELAVL4	87	30.263
ENSMLUG00000006324	PABPC1L	99	48.980	ENSMLUG00000030069	-	97	49.365
ENSMLUG00000006324	PABPC1L	62	60.167	ENSMLUG00000008244	PABPC5	95	60.331
ENSMLUG00000006324	PABPC1L	72	38.750	ENSMLUG00000012923	RBM23	59	38.750
ENSMLUG00000006324	PABPC1L	54	31.707	ENSMLUG00000012683	-	53	32.237
ENSMLUG00000006324	PABPC1L	97	61.137	ENSMLUG00000012245	PABPC1	97	61.137
ENSMLUG00000006324	PABPC1L	61	61.157	ENSMLUG00000008254	PABPC4L	99	61.157
ENSMLUG00000006324	PABPC1L	65	30.189	ENSMLUG00000004645	TIAL1	98	30.189
ENSMLUG00000006324	PABPC1L	59	34.940	ENSMLUG00000014210	ELAVL2	87	34.940

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000006324	PABPC1L	97	78.871	ENSG00000101104	PABPC1L	99	86.850	Homo_sapiens
ENSMLUG00000006324	PABPC1L	98	64.434	ENSAPOG00000010842	pabpc1l	98	64.434	Acanthochromis_polyacanthus
ENSMLUG00000006324	PABPC1L	97	73.733	ENSAMEG00000004099	PABPC1L	99	75.469	Ailuropoda_melanoleuca
ENSMLUG00000006324	PABPC1L	96	70.574	ENSACIG00000021004	-	98	70.574	Amphilophus_citrinellus
ENSMLUG00000006324	PABPC1L	98	64.762	ENSAOCG00000006167	-	98	64.762	Amphiprion_ocellaris
ENSMLUG00000006324	PABPC1L	98	65.539	ENSAPEG00000010558	-	97	79.703	Amphiprion_percula
ENSMLUG00000006324	PABPC1L	98	65.329	ENSATEG00000007428	pabpc1l	98	65.391	Anabas_testudineus
ENSMLUG00000006324	PABPC1L	96	69.132	ENSAPLG00000008415	PABPC1L	98	68.949	Anas_platyrhynchos
ENSMLUG00000006324	PABPC1L	98	69.048	ENSACAG00000011841	PABPC1L	97	69.048	Anolis_carolinensis
ENSMLUG00000006324	PABPC1L	97	77.581	ENSANAG00000026826	PABPC1L	98	77.581	Aotus_nancymaae
ENSMLUG00000006324	PABPC1L	98	64.818	ENSACLG00000024791	pabpc1l	98	64.818	Astatotilapia_calliptera
ENSMLUG00000006324	PABPC1L	98	68.153	ENSAMXG00000013552	pabpc1l	98	68.153	Astyanax_mexicanus
ENSMLUG00000006324	PABPC1L	58	93.452	ENSBTAG00000055300	-	100	93.452	Bos_taurus
ENSMLUG00000006324	PABPC1L	64	73.381	ENSBTAG00000016849	PABPC1L	82	73.381	Bos_taurus
ENSMLUG00000006324	PABPC1L	58	76.301	ENSCJAG00000038506	-	100	76.301	Callithrix_jacchus
ENSMLUG00000006324	PABPC1L	97	78.387	ENSCJAG00000017628	PABPC1L	98	78.387	Callithrix_jacchus
ENSMLUG00000006324	PABPC1L	97	73.416	ENSCAFG00000009573	PABPC1L	99	73.416	Canis_familiaris
ENSMLUG00000006324	PABPC1L	97	82.362	ENSCAFG00020013828	PABPC1L	98	82.362	Canis_lupus_dingo
ENSMLUG00000006324	PABPC1L	97	79.383	ENSCHIG00000025759	PABPC1L	91	79.383	Capra_hircus
ENSMLUG00000006324	PABPC1L	98	78.296	ENSTSYG00000006645	PABPC1L	98	78.296	Carlito_syrichta
ENSMLUG00000006324	PABPC1L	96	72.263	ENSCAPG00000014519	PABPC1L	97	72.263	Cavia_aperea
ENSMLUG00000006324	PABPC1L	97	75.362	ENSCPOG00000013633	PABPC1L	98	75.362	Cavia_porcellus
ENSMLUG00000006324	PABPC1L	97	77.581	ENSCCAG00000023338	PABPC1L	98	77.581	Cebus_capucinus
ENSMLUG00000006324	PABPC1L	97	78.710	ENSCATG00000034065	PABPC1L	98	78.710	Cercocebus_atys
ENSMLUG00000006324	PABPC1L	97	75.523	ENSCLAG00000005298	PABPC1L	98	75.523	Chinchilla_lanigera
ENSMLUG00000006324	PABPC1L	97	79.032	ENSCSAG00000014242	PABPC1L	98	79.032	Chlorocebus_sabaeus
ENSMLUG00000006324	PABPC1L	70	79.372	ENSCPBG00000017755	-	99	79.372	Chrysemys_picta_bellii
ENSMLUG00000006324	PABPC1L	52	76.515	ENSCPBG00000007810	-	81	76.515	Chrysemys_picta_bellii
ENSMLUG00000006324	PABPC1L	97	46.047	ENSCING00000002796	-	96	46.061	Ciona_intestinalis
ENSMLUG00000006324	PABPC1L	98	55.399	ENSCSAVG00000004246	-	97	55.140	Ciona_savignyi
ENSMLUG00000006324	PABPC1L	98	52.519	ENSCSAVG00000003102	-	100	80.822	Ciona_savignyi
ENSMLUG00000006324	PABPC1L	97	74.404	ENSCANG00000037530	PABPC1L	98	74.404	Colobus_angolensis_palliatus
ENSMLUG00000006324	PABPC1L	97	71.935	ENSCGRG00001021938	Pabpc1l	98	71.935	Cricetulus_griseus_chok1gshd
ENSMLUG00000006324	PABPC1L	97	71.935	ENSCGRG00000007946	Pabpc1l	98	71.935	Cricetulus_griseus_crigri
ENSMLUG00000006324	PABPC1L	97	69.615	ENSCSEG00000021295	pabpc1l	98	69.615	Cynoglossus_semilaevis
ENSMLUG00000006324	PABPC1L	97	66.397	ENSCVAG00000015943	-	86	86.260	Cyprinodon_variegatus
ENSMLUG00000006324	PABPC1L	98	66.454	ENSDARG00000002597	pabpc1l	88	86.923	Danio_rerio
ENSMLUG00000006324	PABPC1L	97	80.161	ENSDNOG00000048450	PABPC1L	98	80.161	Dasypus_novemcinctus
ENSMLUG00000006324	PABPC1L	98	77.331	ENSDORG00000001067	Pabpc1l	98	77.331	Dipodomys_ordii
ENSMLUG00000006324	PABPC1L	95	87.398	ENSETEG00000009969	PABPC1L	70	87.398	Echinops_telfairi
ENSMLUG00000006324	PABPC1L	58	92.857	ENSEASG00005023408	-	100	92.857	Equus_asinus_asinus
ENSMLUG00000006324	PABPC1L	56	74.866	ENSEASG00005023407	-	74	74.866	Equus_asinus_asinus
ENSMLUG00000006324	PABPC1L	68	78.175	ENSECAG00000040139	-	90	78.175	Equus_caballus
ENSMLUG00000006324	PABPC1L	98	76.812	ENSEEUG00000005978	PABPC1L	98	76.812	Erinaceus_europaeus
ENSMLUG00000006324	PABPC1L	98	66.403	ENSELUG00000001811	pabpc1l	98	66.403	Esox_lucius
ENSMLUG00000006324	PABPC1L	98	81.906	ENSFCAG00000011692	PABPC1L	98	81.906	Felis_catus
ENSMLUG00000006324	PABPC1L	81	74.175	ENSFALG00000005372	PABPC1L	85	74.175	Ficedula_albicollis
ENSMLUG00000006324	PABPC1L	97	74.074	ENSFDAG00000008291	PABPC1L	98	74.074	Fukomys_damarensis
ENSMLUG00000006324	PABPC1L	98	66.455	ENSFHEG00000003398	pabpc1l	98	66.455	Fundulus_heteroclitus
ENSMLUG00000006324	PABPC1L	98	66.453	ENSGMOG00000004437	pabpc1l	97	66.453	Gadus_morhua
ENSMLUG00000006324	PABPC1L	82	78.538	ENSGALG00000004123	PABPC1L	99	80.760	Gallus_gallus
ENSMLUG00000006324	PABPC1L	98	63.497	ENSGAFG00000021057	pabpc1l	98	63.497	Gambusia_affinis
ENSMLUG00000006324	PABPC1L	98	65.238	ENSGACG00000002792	pabpc1l	99	65.238	Gasterosteus_aculeatus
ENSMLUG00000006324	PABPC1L	98	70.906	ENSGAGG00000000589	PABPC1L	97	77.108	Gopherus_agassizii
ENSMLUG00000006324	PABPC1L	97	79.194	ENSGGOG00000004584	PABPC1L	98	79.194	Gorilla_gorilla
ENSMLUG00000006324	PABPC1L	98	64.659	ENSHBUG00000006134	pabpc1l	98	64.659	Haplochromis_burtoni
ENSMLUG00000006324	PABPC1L	97	76.329	ENSHGLG00000008434	PABPC1L	98	76.329	Heterocephalus_glaber_female
ENSMLUG00000006324	PABPC1L	58	79.775	ENSHGLG00100019506	-	100	79.775	Heterocephalus_glaber_male
ENSMLUG00000006324	PABPC1L	97	76.329	ENSHGLG00100012151	PABPC1L	98	76.329	Heterocephalus_glaber_male
ENSMLUG00000006324	PABPC1L	98	63.387	ENSHCOG00000009270	pabpc1l	98	63.387	Hippocampus_comes
ENSMLUG00000006324	PABPC1L	58	59.770	ENSIPUG00000006780	-	85	59.770	Ictalurus_punctatus
ENSMLUG00000006324	PABPC1L	98	68.740	ENSIPUG00000012602	pabpc1l	98	68.740	Ictalurus_punctatus
ENSMLUG00000006324	PABPC1L	58	59.195	ENSIPUG00000006760	-	88	59.195	Ictalurus_punctatus
ENSMLUG00000006324	PABPC1L	52	64.615	ENSIPUG00000005537	-	100	64.615	Ictalurus_punctatus
ENSMLUG00000006324	PABPC1L	97	78.100	ENSSTOG00000003739	PABPC1L	98	78.100	Ictidomys_tridecemlineatus
ENSMLUG00000006324	PABPC1L	97	63.620	ENSJJAG00000022406	Pabpc1l	97	60.743	Jaculus_jaculus
ENSMLUG00000006324	PABPC1L	98	66.613	ENSKMAG00000016847	pabpc1l	98	66.613	Kryptolebias_marmoratus
ENSMLUG00000006324	PABPC1L	98	64.865	ENSLBEG00000010084	pabpc1l	98	64.865	Labrus_bergylta
ENSMLUG00000006324	PABPC1L	98	66.457	ENSLACG00000005762	PABPC1L	97	66.457	Latimeria_chalumnae
ENSMLUG00000006324	PABPC1L	98	68.850	ENSLOCG00000007519	pabpc1l	97	68.850	Lepisosteus_oculatus
ENSMLUG00000006324	PABPC1L	97	78.205	ENSLAFG00000003553	PABPC1L	99	78.205	Loxodonta_africana
ENSMLUG00000006324	PABPC1L	97	79.032	ENSMFAG00000040365	PABPC1L	98	79.032	Macaca_fascicularis
ENSMLUG00000006324	PABPC1L	97	76.935	ENSMNEG00000032298	PABPC1L	98	76.935	Macaca_nemestrina
ENSMLUG00000006324	PABPC1L	97	78.710	ENSMLEG00000043139	PABPC1L	98	78.710	Mandrillus_leucophaeus
ENSMLUG00000006324	PABPC1L	98	65.490	ENSMAMG00000011854	pabpc1l	99	65.490	Mastacembelus_armatus
ENSMLUG00000006324	PABPC1L	98	64.818	ENSMZEG00005023713	pabpc1l	98	64.818	Maylandia_zebra
ENSMLUG00000006324	PABPC1L	98	71.132	ENSMGAG00000003674	PABPC1L	97	71.132	Meleagris_gallopavo
ENSMLUG00000006324	PABPC1L	97	71.129	ENSMOCG00000013186	Pabpc1l	98	71.129	Microtus_ochrogaster
ENSMLUG00000006324	PABPC1L	98	66.023	ENSMMOG00000020574	-	90	87.692	Mola_mola
ENSMLUG00000006324	PABPC1L	94	72.093	ENSMODG00000016198	PABPC1L	99	72.213	Monodelphis_domestica
ENSMLUG00000006324	PABPC1L	96	64.943	ENSMALG00000021622	pabpc1l	100	64.943	Monopterus_albus
ENSMLUG00000006324	PABPC1L	97	71.129	MGP_CAROLIEiJ_G0024627	Pabpc1l	98	71.129	Mus_caroli
ENSMLUG00000006324	PABPC1L	97	70.968	ENSMUSG00000054582	Pabpc1l	98	70.968	Mus_musculus
ENSMLUG00000006324	PABPC1L	97	70.833	MGP_PahariEiJ_G0026071	Pabpc1l	98	70.833	Mus_pahari
ENSMLUG00000006324	PABPC1L	97	71.129	MGP_SPRETEiJ_G0025549	Pabpc1l	98	71.129	Mus_spretus
ENSMLUG00000006324	PABPC1L	98	81.452	ENSMPUG00000017646	PABPC1L	98	81.452	Mustela_putorius_furo
ENSMLUG00000006324	PABPC1L	97	72.903	ENSNGAG00000010458	Pabpc1l	98	72.903	Nannospalax_galili
ENSMLUG00000006324	PABPC1L	96	70.853	ENSNBRG00000016633	pabpc1l	98	70.853	Neolamprologus_brichardi
ENSMLUG00000006324	PABPC1L	89	68.717	ENSMEUG00000007905	-	89	68.717	Notamacropus_eugenii
ENSMLUG00000006324	PABPC1L	97	76.935	ENSOPRG00000011846	PABPC1L	98	76.935	Ochotona_princeps
ENSMLUG00000006324	PABPC1L	92	71.672	ENSODEG00000015482	PABPC1L	96	71.672	Octodon_degus
ENSMLUG00000006324	PABPC1L	56	74.375	ENSODEG00000002920	-	99	74.375	Octodon_degus
ENSMLUG00000006324	PABPC1L	98	65.183	ENSONIG00000017314	pabpc1l	98	65.183	Oreochromis_niloticus
ENSMLUG00000006324	PABPC1L	89	62.304	ENSOANG00000015793	-	100	62.304	Ornithorhynchus_anatinus
ENSMLUG00000006324	PABPC1L	97	70.968	ENSOCUG00000003005	PABPC1L	99	70.968	Oryctolagus_cuniculus
ENSMLUG00000006324	PABPC1L	98	65.224	ENSORLG00000010322	pabpc1l	98	68.182	Oryzias_latipes
ENSMLUG00000006324	PABPC1L	98	65.224	ENSORLG00020021193	pabpc1l	98	68.182	Oryzias_latipes_hni
ENSMLUG00000006324	PABPC1L	98	65.224	ENSORLG00015017018	pabpc1l	98	68.182	Oryzias_latipes_hsok
ENSMLUG00000006324	PABPC1L	98	61.970	ENSOMEG00000010789	pabpc1l	98	61.970	Oryzias_melastigma
ENSMLUG00000006324	PABPC1L	97	78.435	ENSOGAG00000032999	PABPC1L	98	78.435	Otolemur_garnettii
ENSMLUG00000006324	PABPC1L	97	80.259	ENSOARG00000004578	PABPC1L	98	80.259	Ovis_aries
ENSMLUG00000006324	PABPC1L	97	79.032	ENSPPAG00000039677	PABPC1L	98	79.032	Pan_paniscus
ENSMLUG00000006324	PABPC1L	62	77.370	ENSPPRG00000019327	-	98	77.370	Panthera_pardus
ENSMLUG00000006324	PABPC1L	97	81.892	ENSPTIG00000006524	PABPC1L	98	81.892	Panthera_tigris_altaica
ENSMLUG00000006324	PABPC1L	61	87.156	ENSPTRG00000013531	PABPC1L	99	87.156	Pan_troglodytes
ENSMLUG00000006324	PABPC1L	97	78.710	ENSPANG00000018788	PABPC1L	98	78.710	Papio_anubis
ENSMLUG00000006324	PABPC1L	52	83.846	ENSPKIG00000016810	-	93	83.846	Paramormyrops_kingsleyae
ENSMLUG00000006324	PABPC1L	98	68.480	ENSPKIG00000007322	pabpc1l	98	68.480	Paramormyrops_kingsleyae
ENSMLUG00000006324	PABPC1L	66	79.810	ENSPSIG00000013289	PABPC1L	99	79.810	Pelodiscus_sinensis
ENSMLUG00000006324	PABPC1L	55	64.824	ENSPMGG00000023121	-	90	64.824	Periophthalmus_magnuspinnatus
ENSMLUG00000006324	PABPC1L	61	85.606	ENSPMGG00000023117	pabpc1l	92	85.606	Periophthalmus_magnuspinnatus
ENSMLUG00000006324	PABPC1L	97	71.613	ENSPEMG00000020671	Pabpc1l	98	71.613	Peromyscus_maniculatus_bairdii
ENSMLUG00000006324	PABPC1L	98	67.419	ENSPFOG00000013241	pabpc1l	98	67.258	Poecilia_formosa
ENSMLUG00000006324	PABPC1L	98	67.258	ENSPLAG00000017490	-	98	67.258	Poecilia_latipinna
ENSMLUG00000006324	PABPC1L	52	87.023	ENSPLAG00000023686	-	92	87.023	Poecilia_latipinna
ENSMLUG00000006324	PABPC1L	98	67.150	ENSPMEG00000007677	pabpc1l	98	67.150	Poecilia_mexicana
ENSMLUG00000006324	PABPC1L	52	87.023	ENSPMEG00000009185	-	89	87.023	Poecilia_mexicana
ENSMLUG00000006324	PABPC1L	66	75.060	ENSPREG00000015886	pabpc1l	99	75.060	Poecilia_reticulata
ENSMLUG00000006324	PABPC1L	97	79.194	ENSPPYG00000011042	PABPC1L	98	79.194	Pongo_abelii
ENSMLUG00000006324	PABPC1L	62	90.625	ENSPCAG00000011787	-	75	90.625	Procavia_capensis
ENSMLUG00000006324	PABPC1L	97	78.226	ENSPCOG00000020630	PABPC1L	99	78.100	Propithecus_coquereli
ENSMLUG00000006324	PABPC1L	98	82.714	ENSPVAG00000012663	PABPC1L	98	82.714	Pteropus_vampyrus
ENSMLUG00000006324	PABPC1L	96	70.853	ENSPNYG00000004101	pabpc1l	98	70.853	Pundamilia_nyererei
ENSMLUG00000006324	PABPC1L	98	61.342	ENSPNAG00000021248	pabpc1l	98	61.342	Pygocentrus_nattereri
ENSMLUG00000006324	PABPC1L	97	70.968	ENSRNOG00000012750	Pabpc1l	98	70.968	Rattus_norvegicus
ENSMLUG00000006324	PABPC1L	97	78.548	ENSRBIG00000035381	PABPC1L	98	78.548	Rhinopithecus_bieti
ENSMLUG00000006324	PABPC1L	97	78.710	ENSRROG00000044498	PABPC1L	98	78.710	Rhinopithecus_roxellana
ENSMLUG00000006324	PABPC1L	97	77.419	ENSSBOG00000009532	-	98	77.419	Saimiri_boliviensis_boliviensis
ENSMLUG00000006324	PABPC1L	96	67.206	ENSSHAG00000011446	PABPC1L	99	67.206	Sarcophilus_harrisii
ENSMLUG00000006324	PABPC1L	98	69.391	ENSSFOG00015017304	pabpc1l	98	69.391	Scleropages_formosus
ENSMLUG00000006324	PABPC1L	97	69.068	ENSSMAG00000010516	pabpc1l	93	86.822	Scophthalmus_maximus
ENSMLUG00000006324	PABPC1L	98	65.714	ENSSDUG00000014743	pabpc1l	98	65.714	Seriola_dumerili
ENSMLUG00000006324	PABPC1L	96	69.683	ENSSLDG00000006981	pabpc1l	98	79.904	Seriola_lalandi_dorsalis
ENSMLUG00000006324	PABPC1L	98	69.683	ENSSPUG00000004233	PABPC1L	97	69.683	Sphenodon_punctatus
ENSMLUG00000006324	PABPC1L	84	72.093	ENSSPAG00000017137	pabpc1l	94	72.093	Stegastes_partitus
ENSMLUG00000006324	PABPC1L	98	78.837	ENSSSCG00000007382	PABPC1L	98	78.837	Sus_scrofa
ENSMLUG00000006324	PABPC1L	98	69.640	ENSTGUG00000005114	PABPC1L	98	69.640	Taeniopygia_guttata
ENSMLUG00000006324	PABPC1L	96	65.323	ENSTRUG00000011085	pabpc1l	97	65.323	Takifugu_rubripes
ENSMLUG00000006324	PABPC1L	98	63.651	ENSTNIG00000017903	pabpc1l	97	63.651	Tetraodon_nigroviridis
ENSMLUG00000006324	PABPC1L	92	87.458	ENSTBEG00000002851	PABPC1L	78	87.458	Tupaia_belangeri
ENSMLUG00000006324	PABPC1L	94	79.630	ENSTTRG00000007618	PABPC1L	100	79.672	Tursiops_truncatus
ENSMLUG00000006324	PABPC1L	98	78.387	ENSUAMG00000017682	PABPC1L	98	78.387	Ursus_americanus
ENSMLUG00000006324	PABPC1L	66	84.718	ENSUMAG00000025436	PABPC1L	94	84.718	Ursus_maritimus
ENSMLUG00000006324	PABPC1L	96	87.109	ENSVVUG00000018939	PABPC1L	97	87.109	Vulpes_vulpes
ENSMLUG00000006324	PABPC1L	98	66.827	ENSXETG00000022831	pabpc1l	97	66.827	Xenopus_tropicalis
ENSMLUG00000006324	PABPC1L	98	67.097	ENSXCOG00000005459	pabpc1l	99	82.979	Xiphophorus_couchianus
ENSMLUG00000006324	PABPC1L	98	66.935	ENSXMAG00000017135	pabpc1l	98	66.935	Xiphophorus_maculatus