EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000006448 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 2124 bases
Position: chrGL429872:3307091-3309214
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000005892	zf-C2H2	PF00096.26	1.3e-24	1	5
ENSMLUP00000005892	zf-C2H2	PF00096.26	1.3e-24	2	5
ENSMLUP00000005892	zf-C2H2	PF00096.26	1.3e-24	3	5
ENSMLUP00000005892	zf-C2H2	PF00096.26	1.3e-24	4	5
ENSMLUP00000005892	zf-C2H2	PF00096.26	1.3e-24	5	5
ENSMLUP00000005892	zf-met	PF12874.7	2.4e-06	1	2
ENSMLUP00000005892	zf-met	PF12874.7	2.4e-06	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000006451	-	1365	XM_006092862	ENSMLUP00000005892	455 (aa)	-	G1P722

Gene Model

Click here to download ENSMLUG00000006448's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000006448's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000006448	-	57	41.667	ENSMLUG00000002970	ZBTB16	52	41.667
ENSMLUG00000006448	-	87	93.293	ENSMLUG00000029894	-	70	93.293
ENSMLUG00000006448	-	97	90.854	ENSMLUG00000024124	-	70	90.854

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000006448	-	94	42.683	ENSCHIG00000014993	-	92	42.683	Capra_hircus
ENSMLUG00000006448	-	84	42.051	ENSCHIG00000015589	-	99	44.318	Capra_hircus
ENSMLUG00000006448	-	94	42.683	ENSCHIG00000024202	-	92	42.683	Capra_hircus
ENSMLUG00000006448	-	96	48.598	ENSDNOG00000010100	-	99	48.598	Dasypus_novemcinctus
ENSMLUG00000006448	-	94	59.016	ENSEASG00005020480	-	71	59.016	Equus_asinus_asinus
ENSMLUG00000006448	-	97	59.016	ENSECAG00000006782	-	70	59.016	Equus_caballus
ENSMLUG00000006448	-	97	43.925	ENSFCAG00000041174	-	99	43.925	Felis_catus
ENSMLUG00000006448	-	98	38.095	ENSMAUG00000015051	Zscan5b	97	38.095	Mesocricetus_auratus
ENSMLUG00000006448	-	99	49.533	ENSMPUG00000006686	-	99	49.533	Mustela_putorius_furo
ENSMLUG00000006448	-	99	43.902	ENSOGAG00000026429	-	99	43.902	Otolemur_garnettii
ENSMLUG00000006448	-	94	56.790	ENSOGAG00000011347	-	70	56.790	Otolemur_garnettii
ENSMLUG00000006448	-	97	43.925	ENSPTIG00000015051	-	99	43.925	Panthera_tigris_altaica
ENSMLUG00000006448	-	95	46.237	ENSPVAG00000017654	-	99	46.237	Pteropus_vampyrus