EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000006490 (Gene tree)
Gene ID: 102436619
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 121856 bases
Position: chrGL430205:368428-490283
Accession: 102436619
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000005936	PUF	PF00806.19	1.7e-71	1	8
ENSMLUP00000005936	PUF	PF00806.19	1.7e-71	2	8
ENSMLUP00000005936	PUF	PF00806.19	1.7e-71	3	8
ENSMLUP00000005936	PUF	PF00806.19	1.7e-71	4	8
ENSMLUP00000005936	PUF	PF00806.19	1.7e-71	5	8
ENSMLUP00000005936	PUF	PF00806.19	1.7e-71	6	8
ENSMLUP00000005936	PUF	PF00806.19	1.7e-71	7	8
ENSMLUP00000005936	PUF	PF00806.19	1.7e-71	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000006500	PUM1-201	5298	XM_006102895	ENSMLUP00000005936	1187 (aa)	XP_006102957	G1P759

Gene Model

Click here to download ENSMLUG00000006490's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000006490's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000006490	PUM1	89	76.279	ENSMLUG00000007362	PUM2	100	76.465

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000006490	PUM1	100	99.326	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSMLUG00000006490	PUM1	90	92.010	ENSAPOG00000021632	pum1	100	91.525	Acanthochromis_polyacanthus
ENSMLUG00000006490	PUM1	100	99.160	ENSAMEG00000017656	PUM1	97	99.160	Ailuropoda_melanoleuca
ENSMLUG00000006490	PUM1	100	74.419	ENSACIG00000021013	pum1	100	76.427	Amphilophus_citrinellus
ENSMLUG00000006490	PUM1	90	92.010	ENSAOCG00000003944	pum1	100	91.525	Amphiprion_ocellaris
ENSMLUG00000006490	PUM1	90	92.010	ENSAPEG00000014550	pum1	100	91.525	Amphiprion_percula
ENSMLUG00000006490	PUM1	90	88.915	ENSATEG00000016004	pum1	100	91.525	Anabas_testudineus
ENSMLUG00000006490	PUM1	100	97.225	ENSAPLG00000009351	PUM1	100	97.225	Anas_platyrhynchos
ENSMLUG00000006490	PUM1	100	95.290	ENSACAG00000000682	PUM1	98	95.290	Anolis_carolinensis
ENSMLUG00000006490	PUM1	100	99.158	ENSANAG00000027865	PUM1	100	100.000	Aotus_nancymaae
ENSMLUG00000006490	PUM1	90	76.389	ENSACLG00000019354	pum1	100	78.835	Astatotilapia_calliptera
ENSMLUG00000006490	PUM1	100	78.363	ENSAMXG00000020607	pum1	96	78.947	Astyanax_mexicanus
ENSMLUG00000006490	PUM1	100	99.242	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSMLUG00000006490	PUM1	100	98.991	ENSCJAG00000006035	PUM1	100	100.000	Callithrix_jacchus
ENSMLUG00000006490	PUM1	100	96.972	ENSCAFG00000011205	PUM1	100	96.972	Canis_familiaris
ENSMLUG00000006490	PUM1	92	97.088	ENSCAFG00020024616	PUM1	98	100.000	Canis_lupus_dingo
ENSMLUG00000006490	PUM1	100	99.242	ENSCHIG00000012952	PUM1	100	100.000	Capra_hircus
ENSMLUG00000006490	PUM1	100	98.907	ENSTSYG00000008868	PUM1	100	99.306	Carlito_syrichta
ENSMLUG00000006490	PUM1	100	98.738	ENSCPOG00000031613	PUM1	100	99.306	Cavia_porcellus
ENSMLUG00000006490	PUM1	100	96.888	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSMLUG00000006490	PUM1	100	98.823	ENSCLAG00000007662	PUM1	100	99.306	Chinchilla_lanigera
ENSMLUG00000006490	PUM1	100	98.333	ENSCSAG00000001028	PUM1	100	98.333	Chlorocebus_sabaeus
ENSMLUG00000006490	PUM1	93	95.833	ENSCHOG00000010245	PUM1	93	95.833	Choloepus_hoffmanni
ENSMLUG00000006490	PUM1	100	97.225	ENSCPBG00000009288	PUM1	100	97.631	Chrysemys_picta_bellii
ENSMLUG00000006490	PUM1	100	99.159	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSMLUG00000006490	PUM1	100	98.484	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSMLUG00000006490	PUM1	100	98.484	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSMLUG00000006490	PUM1	90	76.160	ENSCSEG00000015981	pum1	100	78.426	Cynoglossus_semilaevis
ENSMLUG00000006490	PUM1	100	73.615	ENSCVAG00000007043	pum1	100	75.640	Cyprinodon_variegatus
ENSMLUG00000006490	PUM1	100	78.947	ENSDARG00000099256	pum1	100	79.365	Danio_rerio
ENSMLUG00000006490	PUM1	100	98.823	ENSDNOG00000010939	PUM1	100	98.823	Dasypus_novemcinctus
ENSMLUG00000006490	PUM1	85	99.272	ENSDORG00000001875	Pum1	100	99.272	Dipodomys_ordii
ENSMLUG00000006490	PUM1	88	93.561	ENSETEG00000004355	PUM1	87	93.561	Echinops_telfairi
ENSMLUG00000006490	PUM1	100	98.738	ENSEASG00005010813	PUM1	100	98.738	Equus_asinus_asinus
ENSMLUG00000006490	PUM1	100	98.738	ENSECAG00000021369	PUM1	100	98.738	Equus_caballus
ENSMLUG00000006490	PUM1	76	99.661	ENSEEUG00000003871	PUM1	74	99.661	Erinaceus_europaeus
ENSMLUG00000006490	PUM1	100	76.069	ENSELUG00000002409	pum1	100	84.387	Esox_lucius
ENSMLUG00000006490	PUM1	100	99.411	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSMLUG00000006490	PUM1	100	95.729	ENSFALG00000001214	PUM1	97	94.724	Ficedula_albicollis
ENSMLUG00000006490	PUM1	100	98.738	ENSFDAG00000011319	PUM1	100	99.306	Fukomys_damarensis
ENSMLUG00000006490	PUM1	100	97.477	ENSGALG00000042598	PUM1	99	98.583	Gallus_gallus
ENSMLUG00000006490	PUM1	90	88.222	ENSGAFG00000015617	pum1	100	90.799	Gambusia_affinis
ENSMLUG00000006490	PUM1	100	74.587	ENSGACG00000005717	pum1	100	76.277	Gasterosteus_aculeatus
ENSMLUG00000006490	PUM1	100	97.140	ENSGAGG00000001290	PUM1	99	98.381	Gopherus_agassizii
ENSMLUG00000006490	PUM1	100	99.159	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSMLUG00000006490	PUM1	100	74.111	ENSHBUG00000018718	pum1	100	76.218	Haplochromis_burtoni
ENSMLUG00000006490	PUM1	100	98.570	ENSHGLG00000013819	Pum1	100	98.611	Heterocephalus_glaber_female
ENSMLUG00000006490	PUM1	100	98.570	ENSHGLG00100008621	Pum1	100	98.611	Heterocephalus_glaber_male
ENSMLUG00000006490	PUM1	100	76.808	ENSIPUG00000020421	pum1	100	77.824	Ictalurus_punctatus
ENSMLUG00000006490	PUM1	100	98.907	ENSSTOG00000010757	PUM1	100	100.000	Ictidomys_tridecemlineatus
ENSMLUG00000006490	PUM1	100	98.486	ENSJJAG00000000530	Pum1	100	100.000	Jaculus_jaculus
ENSMLUG00000006490	PUM1	100	73.780	ENSKMAG00000003481	pum1	100	75.805	Kryptolebias_marmoratus
ENSMLUG00000006490	PUM1	100	73.488	ENSLBEG00000002527	pum1	100	75.765	Labrus_bergylta
ENSMLUG00000006490	PUM1	100	86.178	ENSLACG00000017188	PUM1	99	86.345	Latimeria_chalumnae
ENSMLUG00000006490	PUM1	100	87.813	ENSLOCG00000005210	pum1	99	87.980	Lepisosteus_oculatus
ENSMLUG00000006490	PUM1	100	98.570	ENSLAFG00000003178	PUM1	100	98.570	Loxodonta_africana
ENSMLUG00000006490	PUM1	100	98.910	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSMLUG00000006490	PUM1	100	98.910	ENSMMUG00000013520	PUM1	100	100.000	Macaca_mulatta
ENSMLUG00000006490	PUM1	100	99.159	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSMLUG00000006490	PUM1	100	99.159	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSMLUG00000006490	PUM1	100	74.194	ENSMAMG00000011606	pum1	100	76.301	Mastacembelus_armatus
ENSMLUG00000006490	PUM1	100	74.111	ENSMZEG00005005834	pum1	100	76.218	Maylandia_zebra
ENSMLUG00000006490	PUM1	100	97.225	ENSMGAG00000000724	PUM1	100	97.225	Meleagris_gallopavo
ENSMLUG00000006490	PUM1	100	98.486	ENSMAUG00000022090	Pum1	100	99.306	Mesocricetus_auratus
ENSMLUG00000006490	PUM1	99	97.046	ENSMICG00000012213	-	100	96.117	Microcebus_murinus
ENSMLUG00000006490	PUM1	100	98.907	ENSMICG00000007713	-	100	99.515	Microcebus_murinus
ENSMLUG00000006490	PUM1	100	98.402	ENSMOCG00000015463	Pum1	100	98.611	Microtus_ochrogaster
ENSMLUG00000006490	PUM1	90	88.684	ENSMMOG00000019817	pum1	100	91.283	Mola_mola
ENSMLUG00000006490	PUM1	100	97.397	ENSMODG00000017067	PUM1	100	97.397	Monodelphis_domestica
ENSMLUG00000006490	PUM1	90	88.915	ENSMALG00000016399	pum1	100	91.525	Monopterus_albus
ENSMLUG00000006490	PUM1	100	98.231	MGP_CAROLIEiJ_G0026549	Pum1	100	98.611	Mus_caroli
ENSMLUG00000006490	PUM1	100	98.484	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSMLUG00000006490	PUM1	100	98.315	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSMLUG00000006490	PUM1	100	98.399	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSMLUG00000006490	PUM1	100	98.823	ENSMPUG00000015454	PUM1	100	98.823	Mustela_putorius_furo
ENSMLUG00000006490	PUM1	100	98.738	ENSNGAG00000002378	Pum1	100	98.753	Nannospalax_galili
ENSMLUG00000006490	PUM1	80	81.289	ENSNBRG00000010689	pum1	100	83.684	Neolamprologus_brichardi
ENSMLUG00000006490	PUM1	100	97.729	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSMLUG00000006490	PUM1	84	96.622	ENSMEUG00000000976	-	82	96.622	Notamacropus_eugenii
ENSMLUG00000006490	PUM1	84	99.065	ENSOPRG00000001776	PUM1	72	99.065	Ochotona_princeps
ENSMLUG00000006490	PUM1	100	98.570	ENSODEG00000003465	PUM1	100	98.611	Octodon_degus
ENSMLUG00000006490	PUM1	100	74.693	ENSONIG00000002290	pum1	100	76.548	Oreochromis_niloticus
ENSMLUG00000006490	PUM1	81	77.766	ENSOANG00000004902	-	100	77.766	Ornithorhynchus_anatinus
ENSMLUG00000006490	PUM1	100	98.652	ENSOCUG00000008641	PUM1	99	98.652	Oryctolagus_cuniculus
ENSMLUG00000006490	PUM1	100	74.608	ENSORLG00000011482	pum1	100	75.967	Oryzias_latipes
ENSMLUG00000006490	PUM1	100	74.691	ENSORLG00020019461	pum1	100	75.967	Oryzias_latipes_hni
ENSMLUG00000006490	PUM1	100	74.691	ENSORLG00015011375	pum1	100	76.049	Oryzias_latipes_hsok
ENSMLUG00000006490	PUM1	90	93.220	ENSOMEG00000009312	pum1	100	90.799	Oryzias_melastigma
ENSMLUG00000006490	PUM1	100	96.222	ENSOGAG00000011063	PUM1	100	96.222	Otolemur_garnettii
ENSMLUG00000006490	PUM1	100	98.234	ENSOARG00000001899	PUM1	100	100.000	Ovis_aries
ENSMLUG00000006490	PUM1	100	99.159	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSMLUG00000006490	PUM1	100	99.327	ENSPPRG00000001370	PUM1	100	100.000	Panthera_pardus
ENSMLUG00000006490	PUM1	100	99.159	ENSPTIG00000010798	PUM1	100	100.000	Panthera_tigris_altaica
ENSMLUG00000006490	PUM1	100	99.159	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSMLUG00000006490	PUM1	100	99.159	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSMLUG00000006490	PUM1	100	78.246	ENSPKIG00000010578	pum1	100	78.153	Paramormyrops_kingsleyae
ENSMLUG00000006490	PUM1	100	97.477	ENSPSIG00000014118	PUM1	100	97.477	Pelodiscus_sinensis
ENSMLUG00000006490	PUM1	80	79.632	ENSPMGG00000005836	pum1	100	82.130	Periophthalmus_magnuspinnatus
ENSMLUG00000006490	PUM1	100	98.570	ENSPEMG00000010009	Pum1	100	99.306	Peromyscus_maniculatus_bairdii
ENSMLUG00000006490	PUM1	100	97.481	ENSPCIG00000014151	PUM1	100	97.826	Phascolarctos_cinereus
ENSMLUG00000006490	PUM1	95	76.970	ENSPFOG00000007289	pum1	99	82.416	Poecilia_formosa
ENSMLUG00000006490	PUM1	100	72.990	ENSPLAG00000007256	pum1	100	78.054	Poecilia_latipinna
ENSMLUG00000006490	PUM1	90	76.980	ENSPMEG00000019543	pum1	99	78.217	Poecilia_mexicana
ENSMLUG00000006490	PUM1	100	74.194	ENSPREG00000005195	pum1	100	81.189	Poecilia_reticulata
ENSMLUG00000006490	PUM1	100	97.197	ENSPPYG00000001621	PUM1	100	97.197	Pongo_abelii
ENSMLUG00000006490	PUM1	78	99.174	ENSPCAG00000001979	PUM1	74	99.174	Procavia_capensis
ENSMLUG00000006490	PUM1	100	98.907	ENSPCOG00000004398	PUM1	100	99.515	Propithecus_coquereli
ENSMLUG00000006490	PUM1	100	96.972	ENSPVAG00000005207	PUM1	97	96.972	Pteropus_vampyrus
ENSMLUG00000006490	PUM1	100	74.194	ENSPNYG00000009518	pum1	100	81.840	Pundamilia_nyererei
ENSMLUG00000006490	PUM1	100	78.780	ENSPNAG00000026728	pum1	100	80.292	Pygocentrus_nattereri
ENSMLUG00000006490	PUM1	100	98.484	ENSRNOG00000011709	Pum1	100	98.484	Rattus_norvegicus
ENSMLUG00000006490	PUM1	100	99.159	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSMLUG00000006490	PUM1	100	99.326	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSMLUG00000006490	PUM1	100	99.075	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSMLUG00000006490	PUM1	100	97.313	ENSSHAG00000010918	PUM1	100	97.313	Sarcophilus_harrisii
ENSMLUG00000006490	PUM1	90	88.915	ENSSMAG00000010918	pum1	100	91.525	Scophthalmus_maximus
ENSMLUG00000006490	PUM1	100	74.194	ENSSDUG00000009021	pum1	100	76.548	Seriola_dumerili
ENSMLUG00000006490	PUM1	95	75.726	ENSSLDG00000009667	pum1	100	78.571	Seriola_lalandi_dorsalis
ENSMLUG00000006490	PUM1	94	100.000	ENSSARG00000003055	PUM1	91	100.000	Sorex_araneus
ENSMLUG00000006490	PUM1	100	96.804	ENSSPUG00000006267	PUM1	100	96.804	Sphenodon_punctatus
ENSMLUG00000006490	PUM1	90	92.010	ENSSPAG00000016636	pum1	100	91.525	Stegastes_partitus
ENSMLUG00000006490	PUM1	100	99.327	ENSSSCG00000003591	PUM1	100	100.000	Sus_scrofa
ENSMLUG00000006490	PUM1	100	74.089	ENSTRUG00000013121	pum1	100	83.313	Takifugu_rubripes
ENSMLUG00000006490	PUM1	100	74.419	ENSTNIG00000016983	pum1	99	76.534	Tetraodon_nigroviridis
ENSMLUG00000006490	PUM1	87	95.122	ENSTBEG00000013810	PUM1	88	95.122	Tupaia_belangeri
ENSMLUG00000006490	PUM1	92	98.906	ENSTTRG00000007436	PUM1	90	98.906	Tursiops_truncatus
ENSMLUG00000006490	PUM1	99	98.984	ENSUAMG00000018262	-	100	98.984	Ursus_americanus
ENSMLUG00000006490	PUM1	95	99.517	ENSUMAG00000009211	PUM1	100	99.517	Ursus_maritimus
ENSMLUG00000006490	PUM1	92	99.322	ENSVPAG00000005902	PUM1	92	99.322	Vicugna_pacos
ENSMLUG00000006490	PUM1	100	99.243	ENSVVUG00000014631	PUM1	100	99.517	Vulpes_vulpes
ENSMLUG00000006490	PUM1	100	87.322	ENSXETG00000012904	pum1	99	86.482	Xenopus_tropicalis
ENSMLUG00000006490	PUM1	100	73.615	ENSXMAG00000002945	pum1	100	78.054	Xiphophorus_maculatus