EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000007374 (Gene tree)
Gene ID: 102417219
Gene Symbol: PTCD2
Alias: FLJ12598
Full Name: pentatricopeptide repeat domain 2
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 26643 bases
Position: chrGL429767:40957849-40984491
Accession: 102417219
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000006730	MRP-S27	PF10037.9	2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000007373	PTCD2-201	1167	XM_006081344	ENSMLUP00000006730	388 (aa)	XP_006081406	G1P947

Gene Model

Click here to download ENSMLUG00000007374's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000007374's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000007374	PTCD2	99	78.756	ENSG00000049883	PTCD2	100	77.833	Homo_sapiens
ENSMLUG00000007374	PTCD2	90	47.414	ENSAPOG00000020682	ptcd2	91	47.414	Acanthochromis_polyacanthus
ENSMLUG00000007374	PTCD2	99	78.553	ENSAMEG00000007194	PTCD2	99	78.553	Ailuropoda_melanoleuca
ENSMLUG00000007374	PTCD2	89	41.547	ENSACIG00000002053	ptcd2	100	41.547	Amphilophus_citrinellus
ENSMLUG00000007374	PTCD2	90	46.552	ENSAOCG00000006616	ptcd2	89	46.552	Amphiprion_ocellaris
ENSMLUG00000007374	PTCD2	90	46.991	ENSAPEG00000022926	ptcd2	89	46.991	Amphiprion_percula
ENSMLUG00000007374	PTCD2	91	58.708	ENSACAG00000009747	PTCD2	90	58.689	Anolis_carolinensis
ENSMLUG00000007374	PTCD2	99	80.311	ENSANAG00000029353	PTCD2	99	80.311	Aotus_nancymaae
ENSMLUG00000007374	PTCD2	91	44.476	ENSACLG00000027742	ptcd2	89	44.540	Astatotilapia_calliptera
ENSMLUG00000007374	PTCD2	84	44.479	ENSAMXG00000029404	ptcd2	86	44.410	Astyanax_mexicanus
ENSMLUG00000007374	PTCD2	99	80.990	ENSBTAG00000014675	PTCD2	100	80.990	Bos_taurus
ENSMLUG00000007374	PTCD2	99	79.275	ENSCJAG00000016364	PTCD2	99	79.275	Callithrix_jacchus
ENSMLUG00000007374	PTCD2	99	78.961	ENSCAFG00000007982	PTCD2	90	78.961	Canis_familiaris
ENSMLUG00000007374	PTCD2	89	81.214	ENSCAFG00020019147	PTCD2	97	81.214	Canis_lupus_dingo
ENSMLUG00000007374	PTCD2	99	81.771	ENSCHIG00000017118	PTCD2	100	81.771	Capra_hircus
ENSMLUG00000007374	PTCD2	99	71.018	ENSCPOG00000040168	PTCD2	100	71.018	Cavia_porcellus
ENSMLUG00000007374	PTCD2	80	73.955	ENSCCAG00000021996	-	98	71.787	Cebus_capucinus
ENSMLUG00000007374	PTCD2	99	77.979	ENSCCAG00000029389	-	99	77.979	Cebus_capucinus
ENSMLUG00000007374	PTCD2	99	77.807	ENSCATG00000019069	PTCD2	100	77.807	Cercocebus_atys
ENSMLUG00000007374	PTCD2	99	72.063	ENSCLAG00000000072	PTCD2	100	72.063	Chinchilla_lanigera
ENSMLUG00000007374	PTCD2	99	78.590	ENSCSAG00000015623	PTCD2	100	78.590	Chlorocebus_sabaeus
ENSMLUG00000007374	PTCD2	89	56.897	ENSCHOG00000010634	PTCD2	100	56.897	Choloepus_hoffmanni
ENSMLUG00000007374	PTCD2	93	54.444	ENSCPBG00000000216	PTCD2	94	52.023	Chrysemys_picta_bellii
ENSMLUG00000007374	PTCD2	99	77.979	ENSCANG00000035636	PTCD2	99	77.979	Colobus_angolensis_palliatus
ENSMLUG00000007374	PTCD2	100	71.907	ENSCGRG00001015289	Ptcd2	84	72.093	Cricetulus_griseus_chok1gshd
ENSMLUG00000007374	PTCD2	100	71.907	ENSCGRG00000006193	Ptcd2	84	72.093	Cricetulus_griseus_crigri
ENSMLUG00000007374	PTCD2	90	44.253	ENSCVAG00000001285	ptcd2	89	44.253	Cyprinodon_variegatus
ENSMLUG00000007374	PTCD2	96	43.979	ENSDARG00000035391	ptcd2	92	45.455	Danio_rerio
ENSMLUG00000007374	PTCD2	99	75.196	ENSDNOG00000008719	PTCD2	100	75.196	Dasypus_novemcinctus
ENSMLUG00000007374	PTCD2	99	74.935	ENSDORG00000004921	Ptcd2	100	74.160	Dipodomys_ordii
ENSMLUG00000007374	PTCD2	100	67.352	ENSETEG00000016542	PTCD2	100	67.352	Echinops_telfairi
ENSMLUG00000007374	PTCD2	99	80.418	ENSEASG00005018038	PTCD2	100	80.418	Equus_asinus_asinus
ENSMLUG00000007374	PTCD2	99	79.793	ENSECAG00000007022	PTCD2	99	79.793	Equus_caballus
ENSMLUG00000007374	PTCD2	99	73.177	ENSEEUG00000014031	PTCD2	99	73.177	Erinaceus_europaeus
ENSMLUG00000007374	PTCD2	90	49.573	ENSELUG00000003584	ptcd2	91	49.573	Esox_lucius
ENSMLUG00000007374	PTCD2	100	73.196	ENSFCAG00000045432	PTCD2	84	73.196	Felis_catus
ENSMLUG00000007374	PTCD2	84	49.847	ENSFALG00000010299	PTCD2	99	49.847	Ficedula_albicollis
ENSMLUG00000007374	PTCD2	99	72.324	ENSFDAG00000018461	PTCD2	100	72.324	Fukomys_damarensis
ENSMLUG00000007374	PTCD2	90	50.427	ENSGMOG00000003637	ptcd2	91	50.427	Gadus_morhua
ENSMLUG00000007374	PTCD2	96	47.978	ENSGALG00000038260	PTCD2	92	49.143	Gallus_gallus
ENSMLUG00000007374	PTCD2	93	57.500	ENSGAGG00000021952	PTCD2	90	58.571	Gopherus_agassizii
ENSMLUG00000007374	PTCD2	99	78.756	ENSGGOG00000010695	PTCD2	99	78.756	Gorilla_gorilla
ENSMLUG00000007374	PTCD2	91	44.476	ENSHBUG00000009191	ptcd2	89	44.540	Haplochromis_burtoni
ENSMLUG00000007374	PTCD2	99	70.496	ENSHGLG00000001234	PTCD2	100	70.496	Heterocephalus_glaber_female
ENSMLUG00000007374	PTCD2	99	70.757	ENSHGLG00100015419	PTCD2	100	70.757	Heterocephalus_glaber_male
ENSMLUG00000007374	PTCD2	92	45.938	ENSHCOG00000001703	ptcd2	90	46.132	Hippocampus_comes
ENSMLUG00000007374	PTCD2	82	45.000	ENSIPUG00000006080	ptcd2	90	44.798	Ictalurus_punctatus
ENSMLUG00000007374	PTCD2	98	77.428	ENSSTOG00000006596	PTCD2	99	77.428	Ictidomys_tridecemlineatus
ENSMLUG00000007374	PTCD2	99	74.413	ENSJJAG00000024388	Ptcd2	100	74.413	Jaculus_jaculus
ENSMLUG00000007374	PTCD2	93	43.454	ENSKMAG00000009329	ptcd2	91	43.875	Kryptolebias_marmoratus
ENSMLUG00000007374	PTCD2	91	44.633	ENSLBEG00000024871	ptcd2	88	45.087	Labrus_bergylta
ENSMLUG00000007374	PTCD2	90	55.271	ENSLOCG00000011122	ptcd2	91	55.271	Lepisosteus_oculatus
ENSMLUG00000007374	PTCD2	80	77.170	ENSLAFG00000004115	PTCD2	100	77.170	Loxodonta_africana
ENSMLUG00000007374	PTCD2	99	77.461	ENSMFAG00000031516	PTCD2	99	77.461	Macaca_fascicularis
ENSMLUG00000007374	PTCD2	99	77.023	ENSMNEG00000007537	PTCD2	100	77.023	Macaca_nemestrina
ENSMLUG00000007374	PTCD2	99	78.238	ENSMLEG00000031093	PTCD2	99	78.238	Mandrillus_leucophaeus
ENSMLUG00000007374	PTCD2	90	47.564	ENSMAMG00000018529	ptcd2	91	47.564	Mastacembelus_armatus
ENSMLUG00000007374	PTCD2	91	44.476	ENSMZEG00005003625	ptcd2	89	44.540	Maylandia_zebra
ENSMLUG00000007374	PTCD2	90	49.713	ENSMGAG00000005033	PTCD2	100	49.713	Meleagris_gallopavo
ENSMLUG00000007374	PTCD2	99	58.290	ENSMAUG00000020253	Ptcd2	100	58.290	Mesocricetus_auratus
ENSMLUG00000007374	PTCD2	99	77.865	ENSMICG00000004535	PTCD2	99	77.865	Microcebus_murinus
ENSMLUG00000007374	PTCD2	99	73.107	ENSMOCG00000019985	Ptcd2	100	73.107	Microtus_ochrogaster
ENSMLUG00000007374	PTCD2	99	56.771	ENSMODG00000001695	PTCD2	91	59.829	Monodelphis_domestica
ENSMLUG00000007374	PTCD2	91	47.458	ENSMALG00000022372	ptcd2	91	47.701	Monopterus_albus
ENSMLUG00000007374	PTCD2	99	70.496	MGP_CAROLIEiJ_G0018829	Ptcd2	100	70.496	Mus_caroli
ENSMLUG00000007374	PTCD2	99	69.974	ENSMUSG00000021650	Ptcd2	100	69.974	Mus_musculus
ENSMLUG00000007374	PTCD2	99	72.846	MGP_PahariEiJ_G0015904	Ptcd2	100	72.846	Mus_pahari
ENSMLUG00000007374	PTCD2	99	70.496	MGP_SPRETEiJ_G0019711	Ptcd2	100	70.496	Mus_spretus
ENSMLUG00000007374	PTCD2	99	79.634	ENSMPUG00000014401	PTCD2	100	79.634	Mustela_putorius_furo
ENSMLUG00000007374	PTCD2	99	71.802	ENSNGAG00000005027	Ptcd2	100	71.802	Nannospalax_galili
ENSMLUG00000007374	PTCD2	91	44.759	ENSNBRG00000008174	ptcd2	91	44.828	Neolamprologus_brichardi
ENSMLUG00000007374	PTCD2	85	43.939	ENSNBRG00000000092	-	100	43.939	Neolamprologus_brichardi
ENSMLUG00000007374	PTCD2	99	79.016	ENSNLEG00000004516	PTCD2	99	79.016	Nomascus_leucogenys
ENSMLUG00000007374	PTCD2	77	51.667	ENSMEUG00000014012	-	82	50.799	Notamacropus_eugenii
ENSMLUG00000007374	PTCD2	99	75.194	ENSOPRG00000007290	PTCD2	99	75.194	Ochotona_princeps
ENSMLUG00000007374	PTCD2	99	73.890	ENSODEG00000016417	PTCD2	100	73.890	Octodon_degus
ENSMLUG00000007374	PTCD2	76	46.939	ENSONIG00000011269	ptcd2	85	47.059	Oreochromis_niloticus
ENSMLUG00000007374	PTCD2	99	75.196	ENSOCUG00000007970	PTCD2	100	75.196	Oryctolagus_cuniculus
ENSMLUG00000007374	PTCD2	89	45.954	ENSORLG00000003851	ptcd2	88	45.954	Oryzias_latipes
ENSMLUG00000007374	PTCD2	89	45.376	ENSORLG00020009823	ptcd2	90	45.376	Oryzias_latipes_hni
ENSMLUG00000007374	PTCD2	89	45.087	ENSORLG00015016777	ptcd2	99	45.087	Oryzias_latipes_hsok
ENSMLUG00000007374	PTCD2	93	43.175	ENSOMEG00000012396	ptcd2	84	44.220	Oryzias_melastigma
ENSMLUG00000007374	PTCD2	99	74.352	ENSOGAG00000008390	PTCD2	99	74.352	Otolemur_garnettii
ENSMLUG00000007374	PTCD2	100	80.720	ENSOARG00000005087	PTCD2	100	80.720	Ovis_aries
ENSMLUG00000007374	PTCD2	99	78.756	ENSPPAG00000028480	PTCD2	99	78.756	Pan_paniscus
ENSMLUG00000007374	PTCD2	99	78.238	ENSPTRG00000016968	PTCD2	99	78.238	Pan_troglodytes
ENSMLUG00000007374	PTCD2	89	80.000	ENSPANG00000006611	PTCD2	89	80.000	Papio_anubis
ENSMLUG00000007374	PTCD2	90	49.008	ENSPKIG00000019896	ptcd2	92	49.008	Paramormyrops_kingsleyae
ENSMLUG00000007374	PTCD2	81	58.991	ENSPSIG00000014559	PTCD2	95	60.261	Pelodiscus_sinensis
ENSMLUG00000007374	PTCD2	99	73.506	ENSPEMG00000000884	Ptcd2	100	73.506	Peromyscus_maniculatus_bairdii
ENSMLUG00000007374	PTCD2	92	60.615	ENSPCIG00000029047	PTCD2	92	61.364	Phascolarctos_cinereus
ENSMLUG00000007374	PTCD2	87	43.917	ENSPLAG00000010456	ptcd2	91	43.966	Poecilia_latipinna
ENSMLUG00000007374	PTCD2	90	44.253	ENSPREG00000021797	ptcd2	88	44.253	Poecilia_reticulata
ENSMLUG00000007374	PTCD2	99	69.689	ENSPPYG00000015543	PTCD2	99	69.689	Pongo_abelii
ENSMLUG00000007374	PTCD2	81	64.331	ENSPCAG00000006806	PTCD2	100	64.331	Procavia_capensis
ENSMLUG00000007374	PTCD2	100	80.670	ENSPVAG00000010935	PTCD2	100	80.670	Pteropus_vampyrus
ENSMLUG00000007374	PTCD2	91	44.476	ENSPNYG00000003122	ptcd2	89	44.540	Pundamilia_nyererei
ENSMLUG00000007374	PTCD2	98	46.475	ENSPNAG00000021490	ptcd2	91	48.857	Pygocentrus_nattereri
ENSMLUG00000007374	PTCD2	99	71.802	ENSRNOG00000028403	Ptcd2	100	71.802	Rattus_norvegicus
ENSMLUG00000007374	PTCD2	99	73.316	ENSRBIG00000032929	PTCD2	99	73.316	Rhinopithecus_bieti
ENSMLUG00000007374	PTCD2	99	78.068	ENSRROG00000000080	PTCD2	100	78.068	Rhinopithecus_roxellana
ENSMLUG00000007374	PTCD2	99	76.762	ENSSBOG00000018911	PTCD2	100	76.762	Saimiri_boliviensis_boliviensis
ENSMLUG00000007374	PTCD2	99	58.333	ENSSHAG00000003833	PTCD2	91	61.364	Sarcophilus_harrisii
ENSMLUG00000007374	PTCD2	85	47.879	ENSSFOG00015015415	ptcd2	83	48.125	Scleropages_formosus
ENSMLUG00000007374	PTCD2	89	44.092	ENSSMAG00000010350	ptcd2	90	44.092	Scophthalmus_maximus
ENSMLUG00000007374	PTCD2	99	44.703	ENSSDUG00000008142	ptcd2	87	46.974	Seriola_dumerili
ENSMLUG00000007374	PTCD2	95	45.699	ENSSLDG00000015284	ptcd2	91	47.262	Seriola_lalandi_dorsalis
ENSMLUG00000007374	PTCD2	81	69.010	ENSSARG00000004983	PTCD2	100	69.010	Sorex_araneus
ENSMLUG00000007374	PTCD2	92	56.704	ENSSPUG00000000176	PTCD2	92	56.704	Sphenodon_punctatus
ENSMLUG00000007374	PTCD2	90	46.264	ENSSPAG00000008591	ptcd2	89	46.264	Stegastes_partitus
ENSMLUG00000007374	PTCD2	100	81.959	ENSSSCG00000016975	PTCD2	91	81.959	Sus_scrofa
ENSMLUG00000007374	PTCD2	89	49.711	ENSTGUG00000005705	PTCD2	99	49.711	Taeniopygia_guttata
ENSMLUG00000007374	PTCD2	99	75.711	ENSTBEG00000016559	PTCD2	99	75.711	Tupaia_belangeri
ENSMLUG00000007374	PTCD2	100	81.748	ENSTTRG00000011851	PTCD2	100	81.748	Tursiops_truncatus
ENSMLUG00000007374	PTCD2	99	78.553	ENSUAMG00000007583	PTCD2	91	78.553	Ursus_americanus
ENSMLUG00000007374	PTCD2	99	78.590	ENSUMAG00000007666	PTCD2	100	78.590	Ursus_maritimus
ENSMLUG00000007374	PTCD2	100	80.977	ENSVPAG00000009597	PTCD2	100	80.977	Vicugna_pacos
ENSMLUG00000007374	PTCD2	99	79.112	ENSVVUG00000007299	-	100	79.112	Vulpes_vulpes
ENSMLUG00000007374	PTCD2	93	52.778	ENSXETG00000031652	PTCD2	92	53.276	Xenopus_tropicalis
ENSMLUG00000007374	PTCD2	90	42.980	ENSXMAG00000005940	ptcd2	82	44.253	Xiphophorus_maculatus