EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000007400 (Gene tree)
Gene ID: 102435524
Gene Symbol: USB1
Alias: C16orf57|FLJ13154|HVSL1|Mpn1
Full Name: U6 snRNA biogenesis phosphodiesterase 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 5953 bases
Position: chrAAPE02069114:580-6532
Accession: 102435524
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000006756	HVSL	PF09749.9	7e-66	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000007402	USB1-201	696	XM_006109305	ENSMLUP00000006756	231 (aa)	XP_006109367	G1P970

Gene Model

Click here to download ENSMLUG00000007400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000007400's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000007400	USB1	100	87.013	ENSG00000103005	USB1	100	87.383	Homo_sapiens
ENSMLUG00000007400	USB1	98	53.304	ENSAPOG00000011942	usb1	81	53.304	Acanthochromis_polyacanthus
ENSMLUG00000007400	USB1	100	89.177	ENSAMEG00000017205	USB1	86	89.177	Ailuropoda_melanoleuca
ENSMLUG00000007400	USB1	98	55.310	ENSACIG00000012234	usb1	83	55.310	Amphilophus_citrinellus
ENSMLUG00000007400	USB1	98	53.744	ENSAOCG00000014831	usb1	80	53.744	Amphiprion_ocellaris
ENSMLUG00000007400	USB1	98	54.185	ENSAPEG00000000296	usb1	80	54.185	Amphiprion_percula
ENSMLUG00000007400	USB1	100	54.113	ENSATEG00000009348	usb1	82	54.113	Anabas_testudineus
ENSMLUG00000007400	USB1	97	70.485	ENSAPLG00000002756	USB1	100	70.925	Anas_platyrhynchos
ENSMLUG00000007400	USB1	98	65.066	ENSACAG00000015481	USB1	100	65.066	Anolis_carolinensis
ENSMLUG00000007400	USB1	100	86.580	ENSANAG00000035640	USB1	87	86.580	Aotus_nancymaae
ENSMLUG00000007400	USB1	97	54.464	ENSACLG00000020586	usb1	79	54.464	Astatotilapia_calliptera
ENSMLUG00000007400	USB1	97	52.000	ENSAMXG00000040146	usb1	75	52.000	Astyanax_mexicanus
ENSMLUG00000007400	USB1	100	88.745	ENSBTAG00000015758	USB1	87	88.745	Bos_taurus
ENSMLUG00000007400	USB1	100	88.745	ENSCJAG00000011733	USB1	87	88.745	Callithrix_jacchus
ENSMLUG00000007400	USB1	99	88.261	ENSCAFG00000008556	USB1	61	88.261	Canis_familiaris
ENSMLUG00000007400	USB1	99	88.261	ENSCAFG00020009263	USB1	86	88.261	Canis_lupus_dingo
ENSMLUG00000007400	USB1	100	88.312	ENSCHIG00000024290	USB1	87	88.312	Capra_hircus
ENSMLUG00000007400	USB1	100	89.610	ENSTSYG00000006997	USB1	87	89.610	Carlito_syrichta
ENSMLUG00000007400	USB1	100	72.294	ENSCAPG00000009057	USB1	99	72.294	Cavia_aperea
ENSMLUG00000007400	USB1	100	87.446	ENSCPOG00000014325	USB1	86	87.446	Cavia_porcellus
ENSMLUG00000007400	USB1	100	87.446	ENSCCAG00000022132	USB1	87	87.446	Cebus_capucinus
ENSMLUG00000007400	USB1	100	88.312	ENSCATG00000032174	USB1	87	88.312	Cercocebus_atys
ENSMLUG00000007400	USB1	76	89.773	ENSCLAG00000007363	USB1	100	89.773	Chinchilla_lanigera
ENSMLUG00000007400	USB1	100	89.177	ENSCSAG00000004783	USB1	87	89.177	Chlorocebus_sabaeus
ENSMLUG00000007400	USB1	100	67.532	ENSCPBG00000026943	USB1	83	67.532	Chrysemys_picta_bellii
ENSMLUG00000007400	USB1	97	34.894	ENSCING00000011490	-	86	34.894	Ciona_intestinalis
ENSMLUG00000007400	USB1	95	30.973	ENSCSAVG00000000894	-	81	30.973	Ciona_savignyi
ENSMLUG00000007400	USB1	100	88.312	ENSCANG00000037135	USB1	88	88.312	Colobus_angolensis_palliatus
ENSMLUG00000007400	USB1	100	85.281	ENSCGRG00001011243	USB1	86	85.281	Cricetulus_griseus_chok1gshd
ENSMLUG00000007400	USB1	100	85.281	ENSCGRG00000013252	USB1	86	85.281	Cricetulus_griseus_crigri
ENSMLUG00000007400	USB1	100	51.515	ENSCSEG00000013881	usb1	83	51.515	Cynoglossus_semilaevis
ENSMLUG00000007400	USB1	97	50.877	ENSCVAG00000009252	usb1	97	51.316	Cyprinodon_variegatus
ENSMLUG00000007400	USB1	97	50.893	ENSDARG00000003841	usb1	81	50.893	Danio_rerio
ENSMLUG00000007400	USB1	100	82.251	ENSDORG00000001888	Usb1	87	82.251	Dipodomys_ordii
ENSMLUG00000007400	USB1	88	41.429	FBgn0037713	CG16790	78	41.429	Drosophila_melanogaster
ENSMLUG00000007400	USB1	100	71.429	ENSETEG00000019682	USB1	87	71.429	Echinops_telfairi
ENSMLUG00000007400	USB1	96	50.450	ENSEBUG00000005889	usb1	78	50.450	Eptatretus_burgeri
ENSMLUG00000007400	USB1	100	91.775	ENSEASG00005005484	USB1	87	91.775	Equus_asinus_asinus
ENSMLUG00000007400	USB1	100	90.909	ENSECAG00000019493	USB1	80	90.909	Equus_caballus
ENSMLUG00000007400	USB1	76	80.114	ENSEEUG00000000154	USB1	66	80.114	Erinaceus_europaeus
ENSMLUG00000007400	USB1	98	49.561	ENSELUG00000010974	usb1	84	49.561	Esox_lucius
ENSMLUG00000007400	USB1	100	92.208	ENSFCAG00000002693	USB1	87	92.208	Felis_catus
ENSMLUG00000007400	USB1	97	66.964	ENSFALG00000006876	USB1	84	66.964	Ficedula_albicollis
ENSMLUG00000007400	USB1	100	89.177	ENSFDAG00000010052	USB1	87	89.177	Fukomys_damarensis
ENSMLUG00000007400	USB1	84	54.124	ENSFHEG00000012334	usb1	77	54.124	Fundulus_heteroclitus
ENSMLUG00000007400	USB1	97	52.018	ENSGMOG00000004228	usb1	99	52.018	Gadus_morhua
ENSMLUG00000007400	USB1	97	69.196	ENSGALG00000035604	USB1	89	69.163	Gallus_gallus
ENSMLUG00000007400	USB1	98	52.155	ENSGAFG00000021890	usb1	82	53.070	Gambusia_affinis
ENSMLUG00000007400	USB1	97	53.125	ENSGACG00000003257	usb1	81	53.125	Gasterosteus_aculeatus
ENSMLUG00000007400	USB1	100	66.234	ENSGAGG00000022572	USB1	85	66.234	Gopherus_agassizii
ENSMLUG00000007400	USB1	100	87.879	ENSGGOG00000017147	USB1	87	87.879	Gorilla_gorilla
ENSMLUG00000007400	USB1	98	54.626	ENSHBUG00000009823	usb1	81	54.626	Haplochromis_burtoni
ENSMLUG00000007400	USB1	100	88.745	ENSHGLG00000016078	USB1	85	88.745	Heterocephalus_glaber_female
ENSMLUG00000007400	USB1	100	88.745	ENSHGLG00100005562	USB1	85	88.745	Heterocephalus_glaber_male
ENSMLUG00000007400	USB1	94	54.167	ENSHCOG00000015633	usb1	86	54.260	Hippocampus_comes
ENSMLUG00000007400	USB1	97	53.571	ENSIPUG00000008601	usb1	78	53.571	Ictalurus_punctatus
ENSMLUG00000007400	USB1	100	89.177	ENSSTOG00000007548	USB1	85	89.177	Ictidomys_tridecemlineatus
ENSMLUG00000007400	USB1	100	90.476	ENSJJAG00000021859	Usb1	86	90.476	Jaculus_jaculus
ENSMLUG00000007400	USB1	98	52.863	ENSKMAG00000007200	usb1	80	52.863	Kryptolebias_marmoratus
ENSMLUG00000007400	USB1	86	53.266	ENSLBEG00000008452	usb1	64	54.211	Labrus_bergylta
ENSMLUG00000007400	USB1	96	59.735	ENSLACG00000000105	USB1	72	63.636	Latimeria_chalumnae
ENSMLUG00000007400	USB1	99	56.087	ENSLOCG00000000465	usb1	82	56.087	Lepisosteus_oculatus
ENSMLUG00000007400	USB1	100	69.528	ENSLAFG00000002267	USB1	86	69.528	Loxodonta_africana
ENSMLUG00000007400	USB1	100	88.745	ENSMFAG00000003926	USB1	87	88.745	Macaca_fascicularis
ENSMLUG00000007400	USB1	100	88.745	ENSMMUG00000022669	USB1	87	88.745	Macaca_mulatta
ENSMLUG00000007400	USB1	100	88.312	ENSMNEG00000042487	USB1	87	88.312	Macaca_nemestrina
ENSMLUG00000007400	USB1	100	88.745	ENSMLEG00000028756	USB1	87	88.745	Mandrillus_leucophaeus
ENSMLUG00000007400	USB1	97	54.911	ENSMAMG00000015092	usb1	80	54.911	Mastacembelus_armatus
ENSMLUG00000007400	USB1	97	54.464	ENSMZEG00005010008	usb1	80	54.464	Maylandia_zebra
ENSMLUG00000007400	USB1	100	84.848	ENSMAUG00000007832	Usb1	87	84.848	Mesocricetus_auratus
ENSMLUG00000007400	USB1	100	89.610	ENSMICG00000004900	USB1	87	89.610	Microcebus_murinus
ENSMLUG00000007400	USB1	100	84.416	ENSMOCG00000022647	Usb1	87	84.416	Microtus_ochrogaster
ENSMLUG00000007400	USB1	99	53.070	ENSMMOG00000000490	usb1	88	53.070	Mola_mola
ENSMLUG00000007400	USB1	94	73.853	ENSMODG00000014067	USB1	85	72.926	Monodelphis_domestica
ENSMLUG00000007400	USB1	98	55.507	ENSMALG00000005930	usb1	80	55.507	Monopterus_albus
ENSMLUG00000007400	USB1	100	84.848	MGP_CAROLIEiJ_G0031421	Usb1	100	82.301	Mus_caroli
ENSMLUG00000007400	USB1	100	84.416	ENSMUSG00000031792	Usb1	100	81.416	Mus_musculus
ENSMLUG00000007400	USB1	100	84.416	MGP_PahariEiJ_G0023019	Usb1	100	81.197	Mus_pahari
ENSMLUG00000007400	USB1	100	83.550	MGP_SPRETEiJ_G0032540	Usb1	87	83.550	Mus_spretus
ENSMLUG00000007400	USB1	100	88.312	ENSMPUG00000004684	USB1	83	88.312	Mustela_putorius_furo
ENSMLUG00000007400	USB1	100	88.745	ENSNGAG00000009703	Usb1	86	88.745	Nannospalax_galili
ENSMLUG00000007400	USB1	100	48.485	ENSNBRG00000008747	usb1	99	52.804	Neolamprologus_brichardi
ENSMLUG00000007400	USB1	94	87.500	ENSNLEG00000003340	USB1	86	87.500	Nomascus_leucogenys
ENSMLUG00000007400	USB1	72	94.118	ENSOPRG00000011803	USB1	72	94.118	Ochotona_princeps
ENSMLUG00000007400	USB1	100	86.147	ENSODEG00000016214	USB1	86	86.147	Octodon_degus
ENSMLUG00000007400	USB1	98	54.185	ENSONIG00000011063	usb1	81	54.185	Oreochromis_niloticus
ENSMLUG00000007400	USB1	97	75.111	ENSOANG00000012118	USB1	94	75.111	Ornithorhynchus_anatinus
ENSMLUG00000007400	USB1	97	51.786	ENSORLG00000012479	usb1	82	51.786	Oryzias_latipes
ENSMLUG00000007400	USB1	97	51.786	ENSORLG00020018671	usb1	82	51.786	Oryzias_latipes_hni
ENSMLUG00000007400	USB1	97	51.786	ENSORLG00015009679	usb1	83	51.786	Oryzias_latipes_hsok
ENSMLUG00000007400	USB1	97	52.232	ENSOMEG00000012930	usb1	81	52.232	Oryzias_melastigma
ENSMLUG00000007400	USB1	100	82.684	ENSOGAG00000003273	USB1	86	82.684	Otolemur_garnettii
ENSMLUG00000007400	USB1	100	90.043	ENSOARG00000001107	USB1	89	90.043	Ovis_aries
ENSMLUG00000007400	USB1	100	87.446	ENSPPAG00000042137	USB1	87	87.446	Pan_paniscus
ENSMLUG00000007400	USB1	100	91.775	ENSPPRG00000024797	USB1	87	91.775	Panthera_pardus
ENSMLUG00000007400	USB1	100	91.342	ENSPTIG00000007506	USB1	87	91.342	Panthera_tigris_altaica
ENSMLUG00000007400	USB1	100	81.385	ENSPTRG00000008172	USB1	100	88.318	Pan_troglodytes
ENSMLUG00000007400	USB1	100	88.745	ENSPANG00000025138	USB1	87	88.745	Papio_anubis
ENSMLUG00000007400	USB1	97	54.260	ENSPKIG00000015109	usb1	75	54.260	Paramormyrops_kingsleyae
ENSMLUG00000007400	USB1	97	52.889	ENSPSIG00000004305	USB1	100	52.889	Pelodiscus_sinensis
ENSMLUG00000007400	USB1	97	52.444	ENSPMGG00000017725	usb1	86	52.444	Periophthalmus_magnuspinnatus
ENSMLUG00000007400	USB1	100	86.580	ENSPEMG00000016183	Usb1	85	86.580	Peromyscus_maniculatus_bairdii
ENSMLUG00000007400	USB1	97	54.185	ENSPMAG00000000462	usb1	95	54.185	Petromyzon_marinus
ENSMLUG00000007400	USB1	98	53.070	ENSPFOG00000011130	usb1	82	53.070	Poecilia_formosa
ENSMLUG00000007400	USB1	98	52.632	ENSPLAG00000009820	usb1	82	52.632	Poecilia_latipinna
ENSMLUG00000007400	USB1	98	53.070	ENSPMEG00000006402	usb1	82	53.070	Poecilia_mexicana
ENSMLUG00000007400	USB1	84	54.639	ENSPREG00000001047	usb1	78	54.639	Poecilia_reticulata
ENSMLUG00000007400	USB1	94	83.486	ENSPPYG00000007401	USB1	87	83.486	Pongo_abelii
ENSMLUG00000007400	USB1	100	90.476	ENSPCOG00000022612	USB1	87	90.476	Propithecus_coquereli
ENSMLUG00000007400	USB1	98	87.611	ENSPVAG00000004613	USB1	87	87.611	Pteropus_vampyrus
ENSMLUG00000007400	USB1	98	54.626	ENSPNYG00000022262	usb1	81	54.626	Pundamilia_nyererei
ENSMLUG00000007400	USB1	97	52.679	ENSPNAG00000011736	usb1	76	52.679	Pygocentrus_nattereri
ENSMLUG00000007400	USB1	100	85.281	ENSRNOG00000013216	Usb1	87	85.281	Rattus_norvegicus
ENSMLUG00000007400	USB1	100	83.117	ENSRBIG00000044466	USB1	100	89.720	Rhinopithecus_bieti
ENSMLUG00000007400	USB1	100	89.177	ENSRROG00000029211	USB1	87	89.177	Rhinopithecus_roxellana
ENSMLUG00000007400	USB1	100	87.879	ENSSBOG00000029362	USB1	87	87.879	Saimiri_boliviensis_boliviensis
ENSMLUG00000007400	USB1	95	73.059	ENSSHAG00000006993	USB1	91	72.489	Sarcophilus_harrisii
ENSMLUG00000007400	USB1	98	57.709	ENSSFOG00015023663	usb1	71	57.709	Scleropages_formosus
ENSMLUG00000007400	USB1	97	52.941	ENSSMAG00000015834	usb1	80	52.941	Scophthalmus_maximus
ENSMLUG00000007400	USB1	98	55.752	ENSSDUG00000002949	usb1	84	55.752	Seriola_dumerili
ENSMLUG00000007400	USB1	97	55.804	ENSSLDG00000014174	usb1	80	55.804	Seriola_lalandi_dorsalis
ENSMLUG00000007400	USB1	93	67.757	ENSSPUG00000006741	USB1	100	67.757	Sphenodon_punctatus
ENSMLUG00000007400	USB1	98	52.863	ENSSPAG00000007484	usb1	80	52.863	Stegastes_partitus
ENSMLUG00000007400	USB1	100	90.043	ENSSSCG00000002807	USB1	86	90.043	Sus_scrofa
ENSMLUG00000007400	USB1	90	69.378	ENSTGUG00000004792	USB1	82	69.378	Taeniopygia_guttata
ENSMLUG00000007400	USB1	100	51.948	ENSTRUG00000021069	usb1	86	51.948	Takifugu_rubripes
ENSMLUG00000007400	USB1	98	49.558	ENSTNIG00000000626	usb1	84	49.558	Tetraodon_nigroviridis
ENSMLUG00000007400	USB1	100	59.307	ENSTBEG00000001507	USB1	99	59.307	Tupaia_belangeri
ENSMLUG00000007400	USB1	100	87.879	ENSUAMG00000016823	USB1	86	87.879	Ursus_americanus
ENSMLUG00000007400	USB1	93	86.916	ENSUMAG00000021369	USB1	100	86.916	Ursus_maritimus
ENSMLUG00000007400	USB1	52	86.667	ENSVPAG00000009834	-	59	86.667	Vicugna_pacos
ENSMLUG00000007400	USB1	99	88.696	ENSVVUG00000023700	USB1	89	88.696	Vulpes_vulpes
ENSMLUG00000007400	USB1	94	56.422	ENSXETG00000013795	usb1	89	56.502	Xenopus_tropicalis
ENSMLUG00000007400	USB1	98	52.155	ENSXMAG00000024687	usb1	67	53.070	Xiphophorus_maculatus