EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000007476 (Gene tree)
Gene ID: 102437139
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 17335 bases
Position: chrGL429777:10666174-10683508
Accession: 2428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000006825	CSD	PF00313.22	1.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000007476	YBX3-201	807	XM_006084343	ENSMLUP00000006825	268 (aa)	-	G1P9C8

Gene Model

Click here to download ENSMLUG00000007476's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000007476's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000007476	YBX3	97	46.886	ENSMLUG00000029452	-	84	53.992
ENSMLUG00000007476	YBX3	97	50.575	ENSMLUG00000024638	-	84	50.190

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000007476	YBX3	100	91.450	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSMLUG00000007476	YBX3	100	95.522	ENSAMEG00000009393	YBX3	75	95.522	Ailuropoda_melanoleuca
ENSMLUG00000007476	YBX3	100	65.926	ENSAPLG00000003147	YBX3	93	66.667	Anas_platyrhynchos
ENSMLUG00000007476	YBX3	50	81.343	ENSANAG00000033366	-	59	81.343	Aotus_nancymaae
ENSMLUG00000007476	YBX3	100	91.822	ENSANAG00000024492	-	84	93.309	Aotus_nancymaae
ENSMLUG00000007476	YBX3	100	89.179	ENSBTAG00000009663	YBX3	68	90.000	Bos_taurus
ENSMLUG00000007476	YBX3	100	91.822	ENSCJAG00000021660	-	72	93.309	Callithrix_jacchus
ENSMLUG00000007476	YBX3	69	90.000	ENSCJAG00000033824	-	71	90.000	Callithrix_jacchus
ENSMLUG00000007476	YBX3	100	95.896	ENSCAFG00000013401	YBX3	77	95.565	Canis_familiaris
ENSMLUG00000007476	YBX3	95	95.686	ENSCAFG00020006412	YBX3	69	95.686	Canis_lupus_dingo
ENSMLUG00000007476	YBX3	100	89.552	ENSCHIG00000010863	YBX3	74	91.791	Capra_hircus
ENSMLUG00000007476	YBX3	100	52.239	ENSTSYG00000035821	-	65	46.595	Carlito_syrichta
ENSMLUG00000007476	YBX3	100	91.822	ENSTSYG00000004204	-	81	93.680	Carlito_syrichta
ENSMLUG00000007476	YBX3	100	85.874	ENSCAPG00000015039	YBX3	86	88.104	Cavia_aperea
ENSMLUG00000007476	YBX3	100	85.874	ENSCPOG00000011329	YBX3	78	88.104	Cavia_porcellus
ENSMLUG00000007476	YBX3	100	91.450	ENSCCAG00000016469	YBX3	71	92.937	Cebus_capucinus
ENSMLUG00000007476	YBX3	100	90.706	ENSCATG00000034411	YBX3	71	92.565	Cercocebus_atys
ENSMLUG00000007476	YBX3	100	86.245	ENSCLAG00000016030	YBX3	87	88.476	Chinchilla_lanigera
ENSMLUG00000007476	YBX3	100	91.078	ENSCSAG00000008744	YBX3	71	92.937	Chlorocebus_sabaeus
ENSMLUG00000007476	YBX3	75	100.000	ENSCHOG00000011988	YBX3	53	100.000	Choloepus_hoffmanni
ENSMLUG00000007476	YBX3	100	76.952	ENSCPBG00000014147	YBX3	73	79.182	Chrysemys_picta_bellii
ENSMLUG00000007476	YBX3	100	91.822	ENSCANG00000036801	YBX3	84	93.680	Colobus_angolensis_palliatus
ENSMLUG00000007476	YBX3	100	90.706	ENSCGRG00001016148	Ybx3	73	90.706	Cricetulus_griseus_chok1gshd
ENSMLUG00000007476	YBX3	99	90.637	ENSCGRG00000004563	Ybx3	88	90.637	Cricetulus_griseus_crigri
ENSMLUG00000007476	YBX3	100	89.219	ENSDORG00000009103	Ybx3	74	91.450	Dipodomys_ordii
ENSMLUG00000007476	YBX3	100	83.026	ENSETEG00000002557	YBX3	93	81.784	Echinops_telfairi
ENSMLUG00000007476	YBX3	95	88.627	ENSEASG00005014726	YBX3	69	90.980	Equus_asinus_asinus
ENSMLUG00000007476	YBX3	95	95.294	ENSECAG00000013777	YBX3	69	95.294	Equus_caballus
ENSMLUG00000007476	YBX3	100	90.706	ENSEEUG00000010415	YBX3	93	92.193	Erinaceus_europaeus
ENSMLUG00000007476	YBX3	100	95.896	ENSFCAG00000027748	YBX3	71	95.896	Felis_catus
ENSMLUG00000007476	YBX3	100	62.132	ENSFALG00000003661	YBX3	93	59.926	Ficedula_albicollis
ENSMLUG00000007476	YBX3	100	82.156	ENSFDAG00000021192	YBX3	85	84.387	Fukomys_damarensis
ENSMLUG00000007476	YBX3	91	77.165	ENSGALG00000031890	YBX3	67	55.185	Gallus_gallus
ENSMLUG00000007476	YBX3	100	75.836	ENSGAGG00000017780	YBX3	73	78.067	Gopherus_agassizii
ENSMLUG00000007476	YBX3	100	91.450	ENSGGOG00000001352	YBX3	71	93.309	Gorilla_gorilla
ENSMLUG00000007476	YBX3	100	73.993	ENSHGLG00000014798	-	78	75.824	Heterocephalus_glaber_female
ENSMLUG00000007476	YBX3	92	77.108	ENSHGLG00000015495	-	71	73.896	Heterocephalus_glaber_female
ENSMLUG00000007476	YBX3	80	90.909	ENSHGLG00100003589	YBX3	78	63.941	Heterocephalus_glaber_male
ENSMLUG00000007476	YBX3	100	85.609	ENSSTOG00000002108	-	81	85.609	Ictidomys_tridecemlineatus
ENSMLUG00000007476	YBX3	100	86.989	ENSSTOG00000032577	-	74	87.732	Ictidomys_tridecemlineatus
ENSMLUG00000007476	YBX3	100	65.683	ENSJJAG00000014239	Ybx3	80	79.310	Jaculus_jaculus
ENSMLUG00000007476	YBX3	100	91.822	ENSLAFG00000017247	YBX3	78	93.309	Loxodonta_africana
ENSMLUG00000007476	YBX3	100	90.706	ENSMFAG00000039369	YBX3	71	92.565	Macaca_fascicularis
ENSMLUG00000007476	YBX3	100	90.706	ENSMMUG00000022469	YBX3	82	92.565	Macaca_mulatta
ENSMLUG00000007476	YBX3	100	91.078	ENSMNEG00000045109	YBX3	71	92.937	Macaca_nemestrina
ENSMLUG00000007476	YBX3	100	90.706	ENSMLEG00000033618	YBX3	75	92.193	Mandrillus_leucophaeus
ENSMLUG00000007476	YBX3	91	77.165	ENSMGAG00000014224	YBX3	92	63.941	Meleagris_gallopavo
ENSMLUG00000007476	YBX3	100	90.335	ENSMAUG00000012185	Ybx3	82	90.335	Mesocricetus_auratus
ENSMLUG00000007476	YBX3	80	82.645	ENSMICG00000031459	-	68	82.645	Microcebus_murinus
ENSMLUG00000007476	YBX3	100	94.796	ENSMICG00000038002	-	71	94.796	Microcebus_murinus
ENSMLUG00000007476	YBX3	100	90.706	ENSMOCG00000016291	Ybx3	86	90.706	Microtus_ochrogaster
ENSMLUG00000007476	YBX3	100	80.370	ENSMODG00000018248	YBX3	84	82.593	Monodelphis_domestica
ENSMLUG00000007476	YBX3	100	89.963	MGP_CAROLIEiJ_G0028947	Ybx3	73	89.963	Mus_caroli
ENSMLUG00000007476	YBX3	100	89.963	ENSMUSG00000030189	Ybx3	73	89.963	Mus_musculus
ENSMLUG00000007476	YBX3	100	90.706	MGP_PahariEiJ_G0022709	Ybx3	73	90.706	Mus_pahari
ENSMLUG00000007476	YBX3	100	90.335	MGP_SPRETEiJ_G0029994	Ybx3	73	90.335	Mus_spretus
ENSMLUG00000007476	YBX3	100	81.522	ENSMPUG00000011810	YBX3	72	81.884	Mustela_putorius_furo
ENSMLUG00000007476	YBX3	100	86.245	ENSNGAG00000000710	Ybx3	58	88.476	Nannospalax_galili
ENSMLUG00000007476	YBX3	100	88.848	ENSNLEG00000034844	YBX3	75	88.848	Nomascus_leucogenys
ENSMLUG00000007476	YBX3	52	89.209	ENSMEUG00000002507	-	65	89.209	Notamacropus_eugenii
ENSMLUG00000007476	YBX3	94	81.746	ENSODEG00000017957	YBX3	78	82.528	Octodon_degus
ENSMLUG00000007476	YBX3	99	91.011	ENSOCUG00000001889	YBX3	76	93.258	Oryctolagus_cuniculus
ENSMLUG00000007476	YBX3	99	89.051	ENSOGAG00000013245	YBX3	71	91.241	Otolemur_garnettii
ENSMLUG00000007476	YBX3	100	77.407	ENSOARG00000020919	YBX3	89	81.852	Ovis_aries
ENSMLUG00000007476	YBX3	100	91.450	ENSPPAG00000039068	YBX3	74	93.309	Pan_paniscus
ENSMLUG00000007476	YBX3	100	95.522	ENSPPRG00000005859	YBX3	71	95.522	Panthera_pardus
ENSMLUG00000007476	YBX3	100	95.149	ENSPTIG00000005322	YBX3	75	95.149	Panthera_tigris_altaica
ENSMLUG00000007476	YBX3	100	91.450	ENSPTRG00000004681	YBX3	71	93.309	Pan_troglodytes
ENSMLUG00000007476	YBX3	100	90.706	ENSPANG00000010280	YBX3	71	92.565	Papio_anubis
ENSMLUG00000007476	YBX3	73	98.810	ENSPSIG00000009247	YBX3	83	100.000	Pelodiscus_sinensis
ENSMLUG00000007476	YBX3	100	88.848	ENSPEMG00000012132	-	83	91.078	Peromyscus_maniculatus_bairdii
ENSMLUG00000007476	YBX3	80	91.919	ENSPEMG00000010391	-	73	62.687	Peromyscus_maniculatus_bairdii
ENSMLUG00000007476	YBX3	98	80.228	ENSPCIG00000029949	YBX3	100	80.228	Phascolarctos_cinereus
ENSMLUG00000007476	YBX3	100	91.450	ENSPPYG00000004279	YBX3	71	92.937	Pongo_abelii
ENSMLUG00000007476	YBX3	69	94.595	ENSPCAG00000001397	YBX3	64	94.595	Procavia_capensis
ENSMLUG00000007476	YBX3	53	94.444	ENSPCOG00000011663	YBX3	59	94.444	Propithecus_coquereli
ENSMLUG00000007476	YBX3	100	76.866	ENSPVAG00000006740	YBX3	71	76.866	Pteropus_vampyrus
ENSMLUG00000007476	YBX3	100	91.078	ENSRNOG00000005480	Ybx3	73	91.078	Rattus_norvegicus
ENSMLUG00000007476	YBX3	100	91.078	ENSRBIG00000039208	YBX3	71	92.937	Rhinopithecus_bieti
ENSMLUG00000007476	YBX3	100	91.078	ENSRROG00000029638	YBX3	71	92.937	Rhinopithecus_roxellana
ENSMLUG00000007476	YBX3	100	91.450	ENSSBOG00000030573	YBX3	78	93.309	Saimiri_boliviensis_boliviensis
ENSMLUG00000007476	YBX3	100	79.273	ENSSHAG00000003262	YBX3	91	80.000	Sarcophilus_harrisii
ENSMLUG00000007476	YBX3	100	95.149	ENSSSCG00000000633	YBX3	69	95.149	Sus_scrofa
ENSMLUG00000007476	YBX3	100	64.815	ENSTGUG00000012047	YBX3	93	64.444	Taeniopygia_guttata
ENSMLUG00000007476	YBX3	100	95.167	ENSTBEG00000012570	YBX3	73	95.167	Tupaia_belangeri
ENSMLUG00000007476	YBX3	99	84.074	ENSTTRG00000008045	YBX3	100	85.556	Tursiops_truncatus
ENSMLUG00000007476	YBX3	97	94.615	ENSUAMG00000016662	YBX3	93	94.615	Ursus_americanus
ENSMLUG00000007476	YBX3	100	95.896	ENSUMAG00000016118	YBX3	87	95.896	Ursus_maritimus
ENSMLUG00000007476	YBX3	100	70.896	ENSVPAG00000000876	YBX3	93	72.761	Vicugna_pacos
ENSMLUG00000007476	YBX3	95	95.294	ENSVVUG00000004956	YBX3	93	95.294	Vulpes_vulpes
ENSMLUG00000007476	YBX3	90	67.176	ENSXETG00000016239	ybx3	83	53.521	Xenopus_tropicalis