EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000008244 (Gene tree)
Gene ID: 102437146
Gene Symbol: PABPC5
Alias: PABP5
Full Name: poly(A) binding protein cytoplasmic 5
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 2008 bases
Position: chrGL429780:10451217-10453224
Accession: 102437146
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000016820	RRM_5	PF13893.6	4.3e-11	1	2
ENSMLUP00000016820	RRM_5	PF13893.6	4.3e-11	2	2
ENSMLUP00000016820	RRM_1	PF00076.22	2.5e-78	1	4
ENSMLUP00000016820	RRM_1	PF00076.22	2.5e-78	2	4
ENSMLUP00000016820	RRM_1	PF00076.22	2.5e-78	3	4
ENSMLUP00000016820	RRM_1	PF00076.22	2.5e-78	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000008235	PABPC5-201	1468	XM_006084710	ENSMLUP00000016820	382 (aa)	XP_006084772	G1PZD8

Gene Model

Click here to download ENSMLUG00000008244's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000008244's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000008244	PABPC5	95	60.331	ENSMLUG00000006324	PABPC1L	62	60.167
ENSMLUG00000008244	PABPC5	96	59.341	ENSMLUG00000008254	PABPC4L	97	59.270
ENSMLUG00000008244	PABPC5	95	62.568	ENSMLUG00000012245	PABPC1	58	62.849
ENSMLUG00000008244	PABPC5	96	55.163	ENSMLUG00000030069	-	61	55.402
ENSMLUG00000008244	PABPC5	96	30.508	ENSMLUG00000012586	TRNAU1AP	64	30.409
ENSMLUG00000008244	PABPC5	94	33.333	ENSMLUG00000014210	ELAVL2	87	33.333
ENSMLUG00000008244	PABPC5	96	68.320	ENSMLUG00000012068	PABPC4	61	68.539
ENSMLUG00000008244	PABPC5	88	30.435	ENSMLUG00000028644	-	50	31.250

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000008244	PABPC5	99	96.063	ENSG00000174740	PABPC5	99	96.063	Homo_sapiens
ENSMLUG00000008244	PABPC5	99	96.588	ENSAMEG00000020114	PABPC5	100	96.588	Ailuropoda_melanoleuca
ENSMLUG00000008244	PABPC5	99	96.063	ENSANAG00000005063	PABPC5	99	96.063	Aotus_nancymaae
ENSMLUG00000008244	PABPC5	100	95.288	ENSBTAG00000019942	PABPC5	100	95.288	Bos_taurus
ENSMLUG00000008244	PABPC5	99	95.538	ENSCJAG00000003665	PABPC5	99	95.538	Callithrix_jacchus
ENSMLUG00000008244	PABPC5	100	96.073	ENSCAFG00000017452	PABPC5	100	96.073	Canis_familiaris
ENSMLUG00000008244	PABPC5	100	95.288	ENSCHIG00000019004	PABPC5	100	95.288	Capra_hircus
ENSMLUG00000008244	PABPC5	100	95.812	ENSTSYG00000036351	PABPC5	100	95.812	Carlito_syrichta
ENSMLUG00000008244	PABPC5	99	85.340	ENSCAPG00000010714	PABPC5	100	85.340	Cavia_aperea
ENSMLUG00000008244	PABPC5	100	92.670	ENSCPOG00000002555	PABPC5	100	92.670	Cavia_porcellus
ENSMLUG00000008244	PABPC5	99	96.063	ENSCCAG00000032154	PABPC5	99	96.063	Cebus_capucinus
ENSMLUG00000008244	PABPC5	99	96.063	ENSCATG00000043083	PABPC5	99	96.063	Cercocebus_atys
ENSMLUG00000008244	PABPC5	100	94.764	ENSCLAG00000000647	PABPC5	100	94.764	Chinchilla_lanigera
ENSMLUG00000008244	PABPC5	99	96.063	ENSCSAG00000000065	PABPC5	99	96.063	Chlorocebus_sabaeus
ENSMLUG00000008244	PABPC5	99	96.063	ENSCANG00000011473	PABPC5	99	96.063	Colobus_angolensis_palliatus
ENSMLUG00000008244	PABPC5	100	92.932	ENSCGRG00000018699	Pabpc5	100	92.932	Cricetulus_griseus_crigri
ENSMLUG00000008244	PABPC5	100	77.023	ENSETEG00000011832	PABPC5	100	77.023	Echinops_telfairi
ENSMLUG00000008244	PABPC5	100	96.597	ENSEASG00005014396	PABPC5	100	96.597	Equus_asinus_asinus
ENSMLUG00000008244	PABPC5	100	96.597	ENSECAG00000003452	PABPC5	100	96.597	Equus_caballus
ENSMLUG00000008244	PABPC5	100	96.335	ENSFCAG00000004998	PABPC5	100	96.335	Felis_catus
ENSMLUG00000008244	PABPC5	100	94.764	ENSFDAG00000000126	PABPC5	100	94.764	Fukomys_damarensis
ENSMLUG00000008244	PABPC5	99	96.063	ENSGGOG00000007622	PABPC5	99	96.063	Gorilla_gorilla
ENSMLUG00000008244	PABPC5	95	94.037	ENSJJAG00000011960	Pabpc5	100	94.037	Jaculus_jaculus
ENSMLUG00000008244	PABPC5	99	96.063	ENSMFAG00000024561	PABPC5	99	96.063	Macaca_fascicularis
ENSMLUG00000008244	PABPC5	99	96.063	ENSMMUG00000011562	PABPC5	99	96.063	Macaca_mulatta
ENSMLUG00000008244	PABPC5	99	96.063	ENSMNEG00000037604	PABPC5	99	96.063	Macaca_nemestrina
ENSMLUG00000008244	PABPC5	99	96.063	ENSMLEG00000028318	PABPC5	99	96.063	Mandrillus_leucophaeus
ENSMLUG00000008244	PABPC5	100	94.503	ENSMICG00000041706	PABPC5	100	94.503	Microcebus_murinus
ENSMLUG00000008244	PABPC5	100	94.241	ENSMOCG00000001554	Pabpc5	100	94.241	Microtus_ochrogaster
ENSMLUG00000008244	PABPC5	99	92.632	MGP_CAROLIEiJ_G0033367	Pabpc5	99	92.632	Mus_caroli
ENSMLUG00000008244	PABPC5	99	93.158	ENSMUSG00000034732	Pabpc5	99	93.158	Mus_musculus
ENSMLUG00000008244	PABPC5	100	93.455	MGP_PahariEiJ_G0031908	Pabpc5	100	93.455	Mus_pahari
ENSMLUG00000008244	PABPC5	99	93.158	MGP_SPRETEiJ_G0034533	Pabpc5	99	93.158	Mus_spretus
ENSMLUG00000008244	PABPC5	100	95.812	ENSMPUG00000018465	PABPC5	100	95.812	Mustela_putorius_furo
ENSMLUG00000008244	PABPC5	95	93.119	ENSNGAG00000004371	Pabpc5	100	93.119	Nannospalax_galili
ENSMLUG00000008244	PABPC5	99	96.063	ENSNLEG00000035086	PABPC5	99	96.063	Nomascus_leucogenys
ENSMLUG00000008244	PABPC5	98	96.833	ENSOPRG00000000856	PABPC5	100	96.833	Ochotona_princeps
ENSMLUG00000008244	PABPC5	100	95.550	ENSOCUG00000010919	PABPC5	100	95.550	Oryctolagus_cuniculus
ENSMLUG00000008244	PABPC5	100	95.026	ENSOGAG00000006882	PABPC5	100	95.026	Otolemur_garnettii
ENSMLUG00000008244	PABPC5	100	95.550	ENSOARG00000010260	PABPC5	100	95.550	Ovis_aries
ENSMLUG00000008244	PABPC5	99	95.801	ENSPPAG00000007378	PABPC5	99	95.801	Pan_paniscus
ENSMLUG00000008244	PABPC5	100	96.335	ENSPPRG00000010742	PABPC5	100	96.335	Panthera_pardus
ENSMLUG00000008244	PABPC5	100	96.335	ENSPTIG00000001480	PABPC5	100	96.335	Panthera_tigris_altaica
ENSMLUG00000008244	PABPC5	99	96.063	ENSPTRG00000022078	PABPC5	99	96.063	Pan_troglodytes
ENSMLUG00000008244	PABPC5	99	96.063	ENSPANG00000018282	PABPC5	99	96.063	Papio_anubis
ENSMLUG00000008244	PABPC5	100	94.241	ENSPEMG00000000171	Pabpc5	100	94.241	Peromyscus_maniculatus_bairdii
ENSMLUG00000008244	PABPC5	99	96.063	ENSPPYG00000020526	PABPC5	99	96.063	Pongo_abelii
ENSMLUG00000008244	PABPC5	99	97.091	ENSPCAG00000015577	PABPC5	100	97.091	Procavia_capensis
ENSMLUG00000008244	PABPC5	100	95.288	ENSPCOG00000000676	PABPC5	100	95.288	Propithecus_coquereli
ENSMLUG00000008244	PABPC5	100	96.859	ENSPVAG00000006465	PABPC5	100	96.859	Pteropus_vampyrus
ENSMLUG00000008244	PABPC5	100	93.717	ENSRNOG00000003354	Pabpc5	100	93.717	Rattus_norvegicus
ENSMLUG00000008244	PABPC5	99	96.063	ENSRBIG00000011760	PABPC5	99	96.063	Rhinopithecus_bieti
ENSMLUG00000008244	PABPC5	99	96.063	ENSRROG00000036708	PABPC5	99	96.063	Rhinopithecus_roxellana
ENSMLUG00000008244	PABPC5	99	96.063	ENSSBOG00000008658	PABPC5	99	96.063	Saimiri_boliviensis_boliviensis
ENSMLUG00000008244	PABPC5	100	93.717	ENSSARG00000014012	PABPC5	100	93.717	Sorex_araneus
ENSMLUG00000008244	PABPC5	100	96.073	ENSSSCG00000040194	PABPC5	100	96.073	Sus_scrofa
ENSMLUG00000008244	PABPC5	100	96.335	ENSTBEG00000016482	PABPC5	100	96.335	Tupaia_belangeri
ENSMLUG00000008244	PABPC5	100	96.073	ENSUAMG00000013627	PABPC5	100	96.073	Ursus_americanus
ENSMLUG00000008244	PABPC5	100	95.812	ENSUMAG00000023934	PABPC5	100	95.812	Ursus_maritimus
ENSMLUG00000008244	PABPC5	100	97.120	ENSVPAG00000001063	PABPC5	100	97.120	Vicugna_pacos
ENSMLUG00000008244	PABPC5	100	96.335	ENSVVUG00000013172	PABPC5	100	96.335	Vulpes_vulpes