EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000008254 (Gene tree)
Gene ID: 102442503
Gene Symbol: PABPC4L
Alias: -
Full Name: poly(A) binding protein cytoplasmic 4 like
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 1113 bases
Position: chrGL429768:9167883-9168995
Accession: 102442503
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000022465	RRM_5	PF13893.6	6.7e-16	1	3
ENSMLUP00000022465	RRM_5	PF13893.6	6.7e-16	2	3
ENSMLUP00000022465	RRM_5	PF13893.6	6.7e-16	3	3
ENSMLUP00000022465	RRM_1	PF00076.22	2.8e-83	1	4
ENSMLUP00000022465	RRM_1	PF00076.22	2.8e-83	2	4
ENSMLUP00000022465	RRM_1	PF00076.22	2.8e-83	3	4
ENSMLUP00000022465	RRM_1	PF00076.22	2.8e-83	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000008250	PABPC4L-201	1113	XM_006081687	ENSMLUP00000022465	370 (aa)	XP_006081749	G1QFI2

Gene Model

Click here to download ENSMLUG00000008254's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000008254's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000008254	PABPC4L	99	61.157	ENSMLUG00000006324	PABPC1L	61	61.157
ENSMLUG00000008254	PABPC4L	97	59.270	ENSMLUG00000008244	PABPC5	96	59.341
ENSMLUG00000008254	PABPC4L	98	55.249	ENSMLUG00000030069	-	61	55.249
ENSMLUG00000008254	PABPC4L	53	35.802	ENSMLUG00000006781	MYEF2	52	35.802
ENSMLUG00000008254	PABPC4L	98	34.211	ENSMLUG00000014210	ELAVL2	90	34.211
ENSMLUG00000008254	PABPC4L	99	36.842	ENSMLUG00000010789	SF3B4	56	36.649
ENSMLUG00000008254	PABPC4L	97	33.333	ENSMLUG00000012586	TRNAU1AP	69	30.808
ENSMLUG00000008254	PABPC4L	99	68.493	ENSMLUG00000012068	PABPC4	62	68.493
ENSMLUG00000008254	PABPC4L	97	31.818	ENSMLUG00000016320	ELAVL3	88	31.818
ENSMLUG00000008254	PABPC4L	99	61.853	ENSMLUG00000012245	PABPC1	60	61.853
ENSMLUG00000008254	PABPC4L	65	34.177	ENSMLUG00000015007	CIRBP	52	34.177
ENSMLUG00000008254	PABPC4L	61	43.038	ENSMLUG00000003996	RBM3	56	43.038

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000008254	PABPC4L	99	78.862	ENSG00000254535	PABPC4L	99	78.862	Homo_sapiens
ENSMLUG00000008254	PABPC4L	99	78.862	ENSANAG00000017199	PABPC4L	86	78.862	Aotus_nancymaae
ENSMLUG00000008254	PABPC4L	99	81.572	ENSBTAG00000046902	PABPC4L	99	81.572	Bos_taurus
ENSMLUG00000008254	PABPC4L	99	78.320	ENSCJAG00000045332	PABPC4L	86	78.320	Callithrix_jacchus
ENSMLUG00000008254	PABPC4L	99	70.652	ENSCAFG00020019182	-	55	70.652	Canis_lupus_dingo
ENSMLUG00000008254	PABPC4L	99	81.572	ENSCHIG00000007231	PABPC4L	99	81.572	Capra_hircus
ENSMLUG00000008254	PABPC4L	97	72.156	ENSCAPG00000000555	PABPC4L	100	72.156	Cavia_aperea
ENSMLUG00000008254	PABPC4L	99	68.564	ENSCPOG00000033167	PABPC4L	100	68.564	Cavia_porcellus
ENSMLUG00000008254	PABPC4L	99	78.320	ENSCCAG00000031681	PABPC4L	86	78.320	Cebus_capucinus
ENSMLUG00000008254	PABPC4L	99	73.984	ENSCLAG00000017628	PABPC4L	99	73.984	Chinchilla_lanigera
ENSMLUG00000008254	PABPC4L	99	78.591	ENSCANG00000037677	PABPC4L	99	78.591	Colobus_angolensis_palliatus
ENSMLUG00000008254	PABPC4L	99	74.255	ENSCGRG00001002070	Pabpc4l	99	74.255	Cricetulus_griseus_chok1gshd
ENSMLUG00000008254	PABPC4L	99	74.255	ENSCGRG00000020086	Pabpc4l	99	74.255	Cricetulus_griseus_crigri
ENSMLUG00000008254	PABPC4L	99	79.946	ENSDNOG00000031077	PABPC4L	95	79.946	Dasypus_novemcinctus
ENSMLUG00000008254	PABPC4L	99	81.843	ENSEASG00005007883	PABPC4L	99	81.843	Equus_asinus_asinus
ENSMLUG00000008254	PABPC4L	99	82.385	ENSECAG00000031416	PABPC4L	99	82.385	Equus_caballus
ENSMLUG00000008254	PABPC4L	99	81.572	ENSFCAG00000028270	PABPC4L	99	81.572	Felis_catus
ENSMLUG00000008254	PABPC4L	99	73.984	ENSFDAG00000019606	PABPC4L	99	73.984	Fukomys_damarensis
ENSMLUG00000008254	PABPC4L	99	79.404	ENSGGOG00000024991	PABPC4L	99	79.404	Gorilla_gorilla
ENSMLUG00000008254	PABPC4L	99	74.526	ENSHGLG00000020104	PABPC4L	99	74.526	Heterocephalus_glaber_female
ENSMLUG00000008254	PABPC4L	99	74.526	ENSHGLG00100020648	PABPC4L	99	74.526	Heterocephalus_glaber_male
ENSMLUG00000008254	PABPC4L	99	76.757	ENSSTOG00000019472	PABPC4L	99	76.757	Ictidomys_tridecemlineatus
ENSMLUG00000008254	PABPC4L	99	74.526	ENSJJAG00000004090	Pabpc4l	99	74.526	Jaculus_jaculus
ENSMLUG00000008254	PABPC4L	99	73.984	ENSMAUG00000016313	Pabpc4l	99	73.984	Mesocricetus_auratus
ENSMLUG00000008254	PABPC4L	99	78.862	ENSMICG00000029683	PABPC4L	99	78.862	Microcebus_murinus
ENSMLUG00000008254	PABPC4L	99	74.797	ENSMOCG00000007551	Pabpc4l	99	74.797	Microtus_ochrogaster
ENSMLUG00000008254	PABPC4L	99	75.581	MGP_CAROLIEiJ_G0024968	Pabpc4l	100	75.581	Mus_caroli
ENSMLUG00000008254	PABPC4L	99	75.581	ENSMUSG00000090919	Pabpc4l	100	75.581	Mus_musculus
ENSMLUG00000008254	PABPC4L	99	76.744	MGP_PahariEiJ_G0026409	Pabpc4l	100	76.744	Mus_pahari
ENSMLUG00000008254	PABPC4L	99	75.000	MGP_SPRETEiJ_G0025903	Pabpc4l	100	75.000	Mus_spretus
ENSMLUG00000008254	PABPC4L	99	77.507	ENSNGAG00000001502	Pabpc4l	99	77.507	Nannospalax_galili
ENSMLUG00000008254	PABPC4L	99	79.133	ENSNLEG00000019300	PABPC4L	99	79.133	Nomascus_leucogenys
ENSMLUG00000008254	PABPC4L	99	73.713	ENSOGAG00000026166	PABPC4L	99	73.713	Otolemur_garnettii
ENSMLUG00000008254	PABPC4L	99	78.947	ENSPPAG00000043745	PABPC4L	92	78.947	Pan_paniscus
ENSMLUG00000008254	PABPC4L	99	81.301	ENSPPRG00000018628	PABPC4L	99	81.301	Panthera_pardus
ENSMLUG00000008254	PABPC4L	99	81.572	ENSPTIG00000010106	PABPC4L	99	81.572	Panthera_tigris_altaica
ENSMLUG00000008254	PABPC4L	99	78.947	ENSPTRG00000045513	-	76	78.947	Pan_troglodytes
ENSMLUG00000008254	PABPC4L	99	73.442	ENSPEMG00000012565	Pabpc4l	99	73.442	Peromyscus_maniculatus_bairdii
ENSMLUG00000008254	PABPC4L	99	79.133	ENSPCOG00000025578	PABPC4L	99	79.133	Propithecus_coquereli
ENSMLUG00000008254	PABPC4L	99	73.171	ENSRNOG00000029749	Pabpc4l	99	73.171	Rattus_norvegicus
ENSMLUG00000008254	PABPC4L	99	78.862	ENSRBIG00000030229	PABPC4L	99	78.862	Rhinopithecus_bieti
ENSMLUG00000008254	PABPC4L	99	78.591	ENSRROG00000020367	PABPC4L	99	78.591	Rhinopithecus_roxellana
ENSMLUG00000008254	PABPC4L	99	78.049	ENSSBOG00000016382	PABPC4L	99	78.049	Saimiri_boliviensis_boliviensis
ENSMLUG00000008254	PABPC4L	99	75.068	ENSSSCG00000009067	PABPC4L	99	75.068	Sus_scrofa
ENSMLUG00000008254	PABPC4L	99	81.572	ENSUAMG00000001289	PABPC4L	99	81.572	Ursus_americanus
ENSMLUG00000008254	PABPC4L	99	81.572	ENSUMAG00000014887	PABPC4L	99	81.572	Ursus_maritimus
ENSMLUG00000008254	PABPC4L	93	71.341	ENSVVUG00000011060	-	75	71.341	Vulpes_vulpes