EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000008286 (Gene tree)
Gene ID: 102422049
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG-binding domain protein 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 13077 bases
Position: chrGL429783:1489944-1503020
Accession: 102422049
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000007570	MBD	PF01429.19	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000008294	MBD1-201	1968	XM_006085087	ENSMLUP00000007570	655 (aa)	XP_006085152	G1PB59

Gene Model

Click here to download ENSMLUG00000008286's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000008286's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000008286	MBD1	96	85.238	ENSG00000141644	MBD1	100	85.238	Homo_sapiens
ENSMLUG00000008286	MBD1	97	89.236	ENSAMEG00000000238	MBD1	97	89.704	Ailuropoda_melanoleuca
ENSMLUG00000008286	MBD1	62	43.341	ENSACAG00000006091	-	100	43.341	Anolis_carolinensis
ENSMLUG00000008286	MBD1	96	84.762	ENSANAG00000036253	MBD1	100	84.762	Aotus_nancymaae
ENSMLUG00000008286	MBD1	96	88.273	ENSBTAG00000003801	MBD1	100	88.431	Bos_taurus
ENSMLUG00000008286	MBD1	96	83.333	ENSCJAG00000004959	MBD1	100	83.333	Callithrix_jacchus
ENSMLUG00000008286	MBD1	99	87.231	ENSCAFG00000018928	MBD1	99	88.000	Canis_familiaris
ENSMLUG00000008286	MBD1	95	87.640	ENSCAFG00020024272	MBD1	97	88.443	Canis_lupus_dingo
ENSMLUG00000008286	MBD1	96	87.797	ENSCHIG00000021134	MBD1	100	87.956	Capra_hircus
ENSMLUG00000008286	MBD1	96	84.762	ENSTSYG00000000509	MBD1	100	84.762	Carlito_syrichta
ENSMLUG00000008286	MBD1	95	59.646	ENSCAPG00000015782	MBD1	96	60.227	Cavia_aperea
ENSMLUG00000008286	MBD1	97	66.912	ENSCPOG00000001671	MBD1	97	71.068	Cavia_porcellus
ENSMLUG00000008286	MBD1	98	78.681	ENSCCAG00000034600	MBD1	100	74.127	Cebus_capucinus
ENSMLUG00000008286	MBD1	96	85.556	ENSCATG00000029959	MBD1	100	85.556	Cercocebus_atys
ENSMLUG00000008286	MBD1	97	82.418	ENSCLAG00000007457	MBD1	90	82.418	Chinchilla_lanigera
ENSMLUG00000008286	MBD1	96	81.905	ENSCSAG00000018070	MBD1	100	81.905	Chlorocebus_sabaeus
ENSMLUG00000008286	MBD1	96	85.397	ENSCANG00000033425	MBD1	100	85.397	Colobus_angolensis_palliatus
ENSMLUG00000008286	MBD1	96	68.770	ENSCGRG00001014843	Mbd1	100	68.770	Cricetulus_griseus_chok1gshd
ENSMLUG00000008286	MBD1	95	49.365	ENSCGRG00000014135	Mbd1	96	53.933	Cricetulus_griseus_crigri
ENSMLUG00000008286	MBD1	96	80.824	ENSDNOG00000015998	MBD1	100	82.250	Dasypus_novemcinctus
ENSMLUG00000008286	MBD1	95	64.309	ENSDORG00000013917	Mbd1	97	64.309	Dipodomys_ordii
ENSMLUG00000008286	MBD1	96	90.174	ENSEASG00005003857	MBD1	100	90.016	Equus_asinus_asinus
ENSMLUG00000008286	MBD1	99	88.136	ENSECAG00000011497	MBD1	82	88.099	Equus_caballus
ENSMLUG00000008286	MBD1	98	87.926	ENSFCAG00000015730	MBD1	100	90.348	Felis_catus
ENSMLUG00000008286	MBD1	95	69.391	ENSFDAG00000011085	MBD1	96	79.261	Fukomys_damarensis
ENSMLUG00000008286	MBD1	50	57.143	ENSGAFG00000008975	mbd1b	50	30.435	Gambusia_affinis
ENSMLUG00000008286	MBD1	96	85.079	ENSGGOG00000016966	MBD1	100	85.079	Gorilla_gorilla
ENSMLUG00000008286	MBD1	96	83.333	ENSHGLG00000008740	MBD1	100	83.333	Heterocephalus_glaber_female
ENSMLUG00000008286	MBD1	89	85.987	ENSHGLG00100005198	MBD1	100	87.541	Heterocephalus_glaber_male
ENSMLUG00000008286	MBD1	96	76.875	ENSSTOG00000007780	MBD1	100	77.031	Ictidomys_tridecemlineatus
ENSMLUG00000008286	MBD1	94	63.285	ENSJJAG00000022859	Mbd1	96	63.871	Jaculus_jaculus
ENSMLUG00000008286	MBD1	64	39.618	ENSLACG00000002414	-	52	65.625	Latimeria_chalumnae
ENSMLUG00000008286	MBD1	95	71.338	ENSLAFG00000031328	MBD1	97	72.134	Loxodonta_africana
ENSMLUG00000008286	MBD1	96	85.397	ENSMFAG00000026335	MBD1	100	85.397	Macaca_fascicularis
ENSMLUG00000008286	MBD1	96	85.397	ENSMMUG00000009050	MBD1	100	85.397	Macaca_mulatta
ENSMLUG00000008286	MBD1	96	85.397	ENSMNEG00000038822	MBD1	100	85.397	Macaca_nemestrina
ENSMLUG00000008286	MBD1	96	85.397	ENSMLEG00000043121	MBD1	100	85.397	Mandrillus_leucophaeus
ENSMLUG00000008286	MBD1	96	83.228	ENSMICG00000006414	MBD1	100	83.228	Microcebus_murinus
ENSMLUG00000008286	MBD1	95	62.730	ENSMUSG00000024561	Mbd1	97	62.577	Mus_musculus
ENSMLUG00000008286	MBD1	96	63.303	MGP_PahariEiJ_G0019128	Mbd1	100	62.997	Mus_pahari
ENSMLUG00000008286	MBD1	94	64.062	MGP_SPRETEiJ_G0023304	Mbd1	99	63.906	Mus_spretus
ENSMLUG00000008286	MBD1	100	87.234	ENSMPUG00000008843	MBD1	100	87.690	Mustela_putorius_furo
ENSMLUG00000008286	MBD1	94	61.429	ENSNGAG00000011412	Mbd1	96	61.746	Nannospalax_galili
ENSMLUG00000008286	MBD1	96	84.444	ENSNLEG00000011661	-	100	84.444	Nomascus_leucogenys
ENSMLUG00000008286	MBD1	94	64.506	ENSNLEG00000032711	-	89	64.344	Nomascus_leucogenys
ENSMLUG00000008286	MBD1	96	68.889	ENSOPRG00000007647	MBD1	100	68.889	Ochotona_princeps
ENSMLUG00000008286	MBD1	95	65.120	ENSODEG00000018451	MBD1	97	75.926	Octodon_degus
ENSMLUG00000008286	MBD1	96	80.983	ENSOCUG00000006554	MBD1	100	81.300	Oryctolagus_cuniculus
ENSMLUG00000008286	MBD1	97	82.689	ENSOGAG00000003784	MBD1	97	82.689	Otolemur_garnettii
ENSMLUG00000008286	MBD1	96	87.559	ENSOARG00000004218	MBD1	95	87.717	Ovis_aries
ENSMLUG00000008286	MBD1	96	81.587	ENSPPAG00000038886	MBD1	100	81.587	Pan_paniscus
ENSMLUG00000008286	MBD1	96	90.032	ENSPPRG00000021387	MBD1	100	90.506	Panthera_pardus
ENSMLUG00000008286	MBD1	96	89.873	ENSPTIG00000021231	MBD1	100	90.348	Panthera_tigris_altaica
ENSMLUG00000008286	MBD1	96	85.079	ENSPTRG00000010021	MBD1	100	85.079	Pan_troglodytes
ENSMLUG00000008286	MBD1	96	85.238	ENSPANG00000010867	MBD1	100	85.238	Papio_anubis
ENSMLUG00000008286	MBD1	95	55.919	ENSPEMG00000022630	Mbd1	97	56.006	Peromyscus_maniculatus_bairdii
ENSMLUG00000008286	MBD1	93	45.997	ENSPCIG00000027937	-	79	45.354	Phascolarctos_cinereus
ENSMLUG00000008286	MBD1	50	57.143	ENSPFOG00000007511	mbd1b	50	30.435	Poecilia_formosa
ENSMLUG00000008286	MBD1	50	57.143	ENSPLAG00000021258	mbd1b	50	30.435	Poecilia_latipinna
ENSMLUG00000008286	MBD1	53	57.143	ENSPMEG00000024145	mbd1b	50	30.435	Poecilia_mexicana
ENSMLUG00000008286	MBD1	50	57.143	ENSPREG00000021805	mbd1b	50	30.435	Poecilia_reticulata
ENSMLUG00000008286	MBD1	96	81.833	ENSPPYG00000009158	MBD1	93	81.115	Pongo_abelii
ENSMLUG00000008286	MBD1	96	69.683	ENSPCAG00000001648	MBD1	93	84.848	Procavia_capensis
ENSMLUG00000008286	MBD1	96	82.567	ENSPCOG00000012450	MBD1	100	82.567	Propithecus_coquereli
ENSMLUG00000008286	MBD1	95	44.720	ENSRNOG00000024104	Mbd1	96	45.794	Rattus_norvegicus
ENSMLUG00000008286	MBD1	96	78.730	ENSRBIG00000041294	MBD1	100	78.730	Rhinopithecus_bieti
ENSMLUG00000008286	MBD1	96	85.079	ENSRROG00000032517	MBD1	100	85.079	Rhinopithecus_roxellana
ENSMLUG00000008286	MBD1	98	83.129	ENSSBOG00000027169	MBD1	100	75.238	Saimiri_boliviensis_boliviensis
ENSMLUG00000008286	MBD1	74	45.214	ENSSHAG00000003661	-	100	43.788	Sarcophilus_harrisii
ENSMLUG00000008286	MBD1	95	84.727	ENSSSCG00000004516	MBD1	100	82.222	Sus_scrofa
ENSMLUG00000008286	MBD1	63	78.750	ENSTBEG00000012651	-	68	78.750	Tupaia_belangeri
ENSMLUG00000008286	MBD1	96	80.696	ENSTTRG00000015523	MBD1	100	81.962	Tursiops_truncatus
ENSMLUG00000008286	MBD1	95	83.788	ENSUAMG00000004752	MBD1	97	84.135	Ursus_americanus
ENSMLUG00000008286	MBD1	96	88.394	ENSUMAG00000002947	MBD1	100	85.918	Ursus_maritimus