EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000008405 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 3138 bases
Position: chrGL429805:1158152-1161289
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000007663	zf-C2H2	PF00096.26	1.2e-25	1	5
ENSMLUP00000007663	zf-C2H2	PF00096.26	1.2e-25	2	5
ENSMLUP00000007663	zf-C2H2	PF00096.26	1.2e-25	3	5
ENSMLUP00000007663	zf-C2H2	PF00096.26	1.2e-25	4	5
ENSMLUP00000007663	zf-C2H2	PF00096.26	1.2e-25	5	5
ENSMLUP00000007663	zf-met	PF12874.7	8.5e-10	1	2
ENSMLUP00000007663	zf-met	PF12874.7	8.5e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000008397	-	2982	-	ENSMLUP00000007663	993 (aa)	-	G1PBE1

Gene Model

Click here to download ENSMLUG00000008405's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000008405's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000008405	-	87	57.333	ENSMLUG00000015541	SALL1	87	55.769
ENSMLUG00000008405	-	56	34.343	ENSMLUG00000009276	-	86	34.343
ENSMLUG00000008405	-	99	60.594	ENSMLUG00000028073	-	99	60.403
ENSMLUG00000008405	-	52	33.071	ENSMLUG00000004199	-	99	33.071
ENSMLUG00000008405	-	56	40.698	ENSMLUG00000002894	ZNF454	68	40.698
ENSMLUG00000008405	-	52	40.659	ENSMLUG00000015757	-	95	31.111
ENSMLUG00000008405	-	92	55.769	ENSMLUG00000010582	SALL3	96	55.769
ENSMLUG00000008405	-	98	89.176	ENSMLUG00000007060	-	99	89.176

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000008405	-	100	75.545	ENSG00000101115	SALL4	100	78.879	Homo_sapiens
ENSMLUG00000008405	-	100	40.881	ENSAPOG00000002465	sall4	100	40.881	Acanthochromis_polyacanthus
ENSMLUG00000008405	-	100	75.283	ENSAMEG00000013250	-	100	75.283	Ailuropoda_melanoleuca
ENSMLUG00000008405	-	100	41.155	ENSACIG00000017298	sall4	100	41.155	Amphilophus_citrinellus
ENSMLUG00000008405	-	100	41.102	ENSAOCG00000023678	sall4	100	41.039	Amphiprion_ocellaris
ENSMLUG00000008405	-	100	40.946	ENSAPEG00000000751	sall4	100	40.885	Amphiprion_percula
ENSMLUG00000008405	-	100	40.357	ENSATEG00000024480	sall4	100	40.357	Anabas_testudineus
ENSMLUG00000008405	-	100	51.287	ENSAPLG00000006498	SALL4	100	52.599	Anas_platyrhynchos
ENSMLUG00000008405	-	100	50.795	ENSACAG00000012748	SALL4	100	51.058	Anolis_carolinensis
ENSMLUG00000008405	-	100	75.473	ENSANAG00000023352	SALL4	100	75.473	Aotus_nancymaae
ENSMLUG00000008405	-	100	40.514	ENSACLG00000017851	sall4	100	40.869	Astatotilapia_calliptera
ENSMLUG00000008405	-	99	42.806	ENSAMXG00000001254	sall4	99	43.538	Astyanax_mexicanus
ENSMLUG00000008405	-	100	69.897	ENSBTAG00000003101	SALL4	100	69.897	Bos_taurus
ENSMLUG00000008405	-	82	78.184	ENSCJAG00000000591	SALL4	99	78.184	Callithrix_jacchus
ENSMLUG00000008405	-	100	75.614	ENSCAFG00000011738	-	100	75.614	Canis_familiaris
ENSMLUG00000008405	-	100	75.520	ENSCAFG00020021870	SALL4	100	75.520	Canis_lupus_dingo
ENSMLUG00000008405	-	100	69.390	ENSCHIG00000026270	SALL4	100	69.577	Capra_hircus
ENSMLUG00000008405	-	100	71.591	ENSTSYG00000007359	SALL4	100	80.603	Carlito_syrichta
ENSMLUG00000008405	-	99	70.302	ENSCAPG00000012135	SALL4	98	70.594	Cavia_aperea
ENSMLUG00000008405	-	100	71.063	ENSCCAG00000029512	-	100	73.016	Cebus_capucinus
ENSMLUG00000008405	-	100	75.829	ENSCATG00000030757	SALL4	100	75.829	Cercocebus_atys
ENSMLUG00000008405	-	100	70.688	ENSCLAG00000010479	SALL4	100	71.065	Chinchilla_lanigera
ENSMLUG00000008405	-	100	75.735	ENSCSAG00000015269	SALL4	100	75.735	Chlorocebus_sabaeus
ENSMLUG00000008405	-	100	53.083	ENSCPBG00000014995	SALL4	100	53.441	Chrysemys_picta_bellii
ENSMLUG00000008405	-	100	75.735	ENSCANG00000036463	SALL4	100	75.735	Colobus_angolensis_palliatus
ENSMLUG00000008405	-	100	66.100	ENSCGRG00001019569	Sall4	100	69.099	Cricetulus_griseus_chok1gshd
ENSMLUG00000008405	-	100	65.911	ENSCGRG00000000462	Sall4	98	79.012	Cricetulus_griseus_crigri
ENSMLUG00000008405	-	81	57.692	ENSCSEG00000014604	sall4	100	40.321	Cynoglossus_semilaevis
ENSMLUG00000008405	-	100	40.625	ENSCVAG00000010815	sall4	100	40.661	Cyprinodon_variegatus
ENSMLUG00000008405	-	99	42.406	ENSDARG00000044485	sall4	99	42.529	Danio_rerio
ENSMLUG00000008405	-	100	73.510	ENSDNOG00000040633	SALL4	100	73.510	Dasypus_novemcinctus
ENSMLUG00000008405	-	100	62.476	ENSDORG00000012841	Sall4	100	81.319	Dipodomys_ordii
ENSMLUG00000008405	-	72	67.000	ENSETEG00000012475	-	66	67.554	Echinops_telfairi
ENSMLUG00000008405	-	100	78.450	ENSECAG00000018533	SALL4	100	78.450	Equus_caballus
ENSMLUG00000008405	-	100	72.545	ENSEEUG00000003649	SALL4	99	72.545	Erinaceus_europaeus
ENSMLUG00000008405	-	100	40.961	ENSELUG00000005696	sall4	100	41.223	Esox_lucius
ENSMLUG00000008405	-	100	73.019	ENSFCAG00000002822	SALL4	100	73.019	Felis_catus
ENSMLUG00000008405	-	100	50.801	ENSFALG00000013149	SALL4	100	51.779	Ficedula_albicollis
ENSMLUG00000008405	-	100	69.668	ENSFDAG00000017812	SALL4	100	69.668	Fukomys_damarensis
ENSMLUG00000008405	-	100	42.152	ENSFHEG00000014187	sall4	100	42.152	Fundulus_heteroclitus
ENSMLUG00000008405	-	54	59.615	ENSGMOG00000003822	sall4	100	41.044	Gadus_morhua
ENSMLUG00000008405	-	100	51.291	ENSGALG00000041365	SALL4	100	51.925	Gallus_gallus
ENSMLUG00000008405	-	100	41.763	ENSGAFG00000019925	sall4	100	41.927	Gambusia_affinis
ENSMLUG00000008405	-	84	57.692	ENSGACG00000011124	sall4	78	59.615	Gasterosteus_aculeatus
ENSMLUG00000008405	-	100	53.083	ENSGAGG00000002297	SALL4	100	53.441	Gopherus_agassizii
ENSMLUG00000008405	-	98	78.196	ENSGGOG00000001832	SALL4	100	75.924	Gorilla_gorilla
ENSMLUG00000008405	-	100	40.267	ENSHBUG00000007327	sall4	100	40.516	Haplochromis_burtoni
ENSMLUG00000008405	-	98	75.223	ENSHGLG00000009043	SALL4	96	75.223	Heterocephalus_glaber_female
ENSMLUG00000008405	-	98	75.223	ENSHGLG00100002722	SALL4	96	75.223	Heterocephalus_glaber_male
ENSMLUG00000008405	-	100	41.044	ENSHCOG00000008519	sall4	100	41.314	Hippocampus_comes
ENSMLUG00000008405	-	99	42.756	ENSIPUG00000019170	sall4	99	42.934	Ictalurus_punctatus
ENSMLUG00000008405	-	68	76.395	ENSSTOG00000025002	SALL4	95	89.706	Ictidomys_tridecemlineatus
ENSMLUG00000008405	-	100	71.429	ENSJJAG00000020688	Sall4	98	90.141	Jaculus_jaculus
ENSMLUG00000008405	-	100	40.888	ENSKMAG00000002501	sall4	100	41.314	Kryptolebias_marmoratus
ENSMLUG00000008405	-	100	41.166	ENSLBEG00000019951	sall4	100	41.287	Labrus_bergylta
ENSMLUG00000008405	-	96	43.955	ENSLACG00000013898	SALL4	100	57.778	Latimeria_chalumnae
ENSMLUG00000008405	-	100	45.293	ENSLOCG00000002427	sall4	100	45.382	Lepisosteus_oculatus
ENSMLUG00000008405	-	100	74.502	ENSLAFG00000004309	SALL4	100	74.502	Loxodonta_africana
ENSMLUG00000008405	-	100	75.829	ENSMFAG00000027169	SALL4	100	75.829	Macaca_fascicularis
ENSMLUG00000008405	-	93	78.384	ENSMMUG00000003870	SALL4	100	79.741	Macaca_mulatta
ENSMLUG00000008405	-	93	78.489	ENSMNEG00000035995	SALL4	100	78.489	Macaca_nemestrina
ENSMLUG00000008405	-	100	75.924	ENSMLEG00000030467	SALL4	100	75.924	Mandrillus_leucophaeus
ENSMLUG00000008405	-	100	41.156	ENSMAMG00000005223	sall4	100	41.600	Mastacembelus_armatus
ENSMLUG00000008405	-	100	40.655	ENSMZEG00005023418	sall4	100	41.067	Maylandia_zebra
ENSMLUG00000008405	-	78	55.769	ENSMGAG00000009344	SALL4	99	55.769	Meleagris_gallopavo
ENSMLUG00000008405	-	100	65.725	ENSMAUG00000015814	Sall4	98	73.494	Mesocricetus_auratus
ENSMLUG00000008405	-	100	75.594	ENSMICG00000000027	SALL4	100	75.594	Microcebus_murinus
ENSMLUG00000008405	-	100	68.293	ENSMOCG00000018245	Sall4	98	84.932	Microtus_ochrogaster
ENSMLUG00000008405	-	100	40.560	ENSMMOG00000014929	sall4	100	40.938	Mola_mola
ENSMLUG00000008405	-	100	54.174	ENSMODG00000016387	SALL4	97	54.174	Monodelphis_domestica
ENSMLUG00000008405	-	100	36.943	ENSMALG00000018709	sall4	92	57.692	Monopterus_albus
ENSMLUG00000008405	-	100	64.640	MGP_CAROLIEiJ_G0024723	Sall4	98	88.889	Mus_caroli
ENSMLUG00000008405	-	100	64.513	ENSMUSG00000027547	Sall4	98	88.889	Mus_musculus
ENSMLUG00000008405	-	100	63.519	MGP_PahariEiJ_G0026164	Sall4	98	88.889	Mus_pahari
ENSMLUG00000008405	-	100	64.700	MGP_SPRETEiJ_G0025643	Sall4	98	88.889	Mus_spretus
ENSMLUG00000008405	-	100	74.670	ENSMPUG00000017543	SALL4	96	74.953	Mustela_putorius_furo
ENSMLUG00000008405	-	100	69.763	ENSNGAG00000017833	Sall4	100	70.237	Nannospalax_galili
ENSMLUG00000008405	-	100	40.502	ENSNBRG00000001829	sall4	100	41.156	Neolamprologus_brichardi
ENSMLUG00000008405	-	100	75.640	ENSNLEG00000007013	SALL4	100	75.640	Nomascus_leucogenys
ENSMLUG00000008405	-	85	55.769	ENSMEUG00000005793	-	99	55.809	Notamacropus_eugenii
ENSMLUG00000008405	-	100	70.151	ENSOPRG00000011640	SALL4	100	70.151	Ochotona_princeps
ENSMLUG00000008405	-	100	40.877	ENSONIG00000016557	sall4	100	41.404	Oreochromis_niloticus
ENSMLUG00000008405	-	100	56.408	ENSOANG00000008667	SALL4	97	56.408	Ornithorhynchus_anatinus
ENSMLUG00000008405	-	98	71.724	ENSOCUG00000011797	SALL4	99	71.724	Oryctolagus_cuniculus
ENSMLUG00000008405	-	100	41.888	ENSORLG00000016130	sall4	100	41.797	Oryzias_latipes
ENSMLUG00000008405	-	100	41.985	ENSORLG00020007339	sall4	100	41.667	Oryzias_latipes_hni
ENSMLUG00000008405	-	100	41.575	ENSORLG00015002265	sall4	100	41.575	Oryzias_latipes_hsok
ENSMLUG00000008405	-	100	41.000	ENSOMEG00000017344	sall4	100	41.000	Oryzias_melastigma
ENSMLUG00000008405	-	97	75.787	ENSOGAG00000013799	SALL4	99	75.787	Otolemur_garnettii
ENSMLUG00000008405	-	100	67.627	ENSOARG00000014570	SALL4	100	67.627	Ovis_aries
ENSMLUG00000008405	-	98	77.899	ENSPPAG00000038064	SALL4	100	75.640	Pan_paniscus
ENSMLUG00000008405	-	100	73.019	ENSPPRG00000008677	SALL4	100	73.019	Panthera_pardus
ENSMLUG00000008405	-	98	77.899	ENSPTRG00000013631	SALL4	100	75.640	Pan_troglodytes
ENSMLUG00000008405	-	93	78.489	ENSPANG00000021792	SALL4	100	78.489	Papio_anubis
ENSMLUG00000008405	-	100	43.024	ENSPKIG00000007074	sall4	100	43.204	Paramormyrops_kingsleyae
ENSMLUG00000008405	-	100	52.542	ENSPSIG00000009066	SALL4	100	52.899	Pelodiscus_sinensis
ENSMLUG00000008405	-	100	40.703	ENSPMGG00000022551	sall4	100	40.901	Periophthalmus_magnuspinnatus
ENSMLUG00000008405	-	100	68.327	ENSPEMG00000022706	Sall4	98	90.278	Peromyscus_maniculatus_bairdii
ENSMLUG00000008405	-	100	53.641	ENSPCIG00000022838	SALL4	97	53.996	Phascolarctos_cinereus
ENSMLUG00000008405	-	100	41.779	ENSPFOG00000001442	sall4	100	41.779	Poecilia_formosa
ENSMLUG00000008405	-	100	41.689	ENSPLAG00000008760	sall4	100	41.689	Poecilia_latipinna
ENSMLUG00000008405	-	100	41.973	ENSPMEG00000008497	sall4	100	41.973	Poecilia_mexicana
ENSMLUG00000008405	-	100	41.607	ENSPREG00000021140	sall4	100	41.607	Poecilia_reticulata
ENSMLUG00000008405	-	100	75.450	ENSPPYG00000011138	SALL4	100	75.450	Pongo_abelii
ENSMLUG00000008405	-	100	69.282	ENSPCAG00000004726	SALL4	99	69.282	Procavia_capensis
ENSMLUG00000008405	-	100	75.924	ENSPCOG00000016321	SALL4	100	75.924	Propithecus_coquereli
ENSMLUG00000008405	-	94	78.702	ENSPVAG00000002075	SALL4	94	78.702	Pteropus_vampyrus
ENSMLUG00000008405	-	100	40.516	ENSPNYG00000021738	sall4	100	40.747	Pundamilia_nyererei
ENSMLUG00000008405	-	99	42.946	ENSPNAG00000020929	sall4	99	43.036	Pygocentrus_nattereri
ENSMLUG00000008405	-	100	65.363	ENSRNOG00000050035	Sall4	100	65.736	Rattus_norvegicus
ENSMLUG00000008405	-	100	75.735	ENSRBIG00000039876	SALL4	100	78.384	Rhinopithecus_bieti
ENSMLUG00000008405	-	100	75.829	ENSRROG00000036585	SALL4	100	75.829	Rhinopithecus_roxellana
ENSMLUG00000008405	-	100	74.597	ENSSBOG00000030011	SALL4	100	74.597	Saimiri_boliviensis_boliviensis
ENSMLUG00000008405	-	98	66.176	ENSSHAG00000018013	SALL4	87	66.176	Sarcophilus_harrisii
ENSMLUG00000008405	-	100	43.446	ENSSFOG00015021075	sall4	100	43.470	Scleropages_formosus
ENSMLUG00000008405	-	100	40.737	ENSSMAG00000019218	sall4	99	40.661	Scophthalmus_maximus
ENSMLUG00000008405	-	100	40.941	ENSSDUG00000004657	sall4	100	41.187	Seriola_dumerili
ENSMLUG00000008405	-	100	40.989	ENSSLDG00000004973	sall4	100	41.416	Seriola_lalandi_dorsalis
ENSMLUG00000008405	-	100	40.470	ENSSPAG00000001978	sall4	100	40.631	Stegastes_partitus
ENSMLUG00000008405	-	100	74.340	ENSSSCG00000007479	SALL4	100	74.340	Sus_scrofa
ENSMLUG00000008405	-	84	61.538	ENSTRUG00000007410	sall4	78	61.538	Takifugu_rubripes
ENSMLUG00000008405	-	84	61.538	ENSTNIG00000012460	sall4	99	41.322	Tetraodon_nigroviridis
ENSMLUG00000008405	-	98	75.719	ENSTTRG00000007753	SALL4	99	75.719	Tursiops_truncatus
ENSMLUG00000008405	-	100	75.660	ENSUAMG00000010113	SALL4	100	75.660	Ursus_americanus
ENSMLUG00000008405	-	98	76.840	ENSUMAG00000024274	SALL4	99	76.840	Ursus_maritimus
ENSMLUG00000008405	-	100	48.942	ENSXETG00000012326	sall4	100	48.942	Xenopus_tropicalis
ENSMLUG00000008405	-	100	39.576	ENSXCOG00000015467	sall4	100	39.741	Xiphophorus_couchianus
ENSMLUG00000008405	-	100	39.361	ENSXMAG00000012692	sall4	100	39.524	Xiphophorus_maculatus