EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000009088 (Gene tree)
Gene ID: 102424372
Gene Symbol: -
Alias: -
Full Name: RNA polymerase II subunit A
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 18800 bases
Position: chrGL430457:203991-222790
Accession: 102424372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000008299	RNA_pol_Rpb1_5	PF04998.17	5.5e-101	1	1
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	1	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	2	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	3	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	4	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	5	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	6	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	7	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	8	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	9	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	10	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	11	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	12	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	13	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	14	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	15	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	16	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	17	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	18	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	19	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	20	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	21	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	22	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	23	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	24	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	25	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	26	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	27	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	28	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	29	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	30	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	31	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	32	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	33	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	34	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	35	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	36	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	37	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	38	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	39	40
ENSMLUP00000008299	RNA_pol_Rpb1_R	PF05001.13	3e-27	40	40
ENSMLUP00000008299	RNA_pol_Rpb1_4	PF05000.17	3.1e-38	1	1
ENSMLUP00000008299	RNA_pol_Rpb1_2	PF00623.20	9.8e-75	1	1
ENSMLUP00000008299	RNA_pol_Rpb1_3	PF04983.18	7.3e-50	1	1
ENSMLUP00000008299	RNA_pol_Rpb1_1	PF04997.12	9.5e-107	1	1
ENSMLUP00000008299	RNA_pol_Rpb1_7	PF04990.12	1.7e-54	1	1
ENSMLUP00000008299	RNA_pol_Rpb1_6	PF04992.14	2.2e-67	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000009110	-	5919	XM_006105498	ENSMLUP00000008299	1972 (aa)	XP_006105560	G1PCY5

Gene Model

Click here to download ENSMLUG00000009088's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000009088's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000009088	-	66	37.676	ENSMLUG00000011522	POLR3A	91	37.540
ENSMLUG00000009088	-	53	38.806	ENSMLUG00000015723	POLR1A	62	38.806

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000009088	-	82	93.870	ENSAPOG00000006552	polr2a	91	93.862	Acanthochromis_polyacanthus
ENSMLUG00000009088	-	100	99.190	ENSAMEG00000016265	-	100	99.190	Ailuropoda_melanoleuca
ENSMLUG00000009088	-	82	91.889	ENSACIG00000015982	polr2a	81	91.878	Amphilophus_citrinellus
ENSMLUG00000009088	-	97	91.827	ENSAOCG00000004255	polr2a	96	91.816	Amphiprion_ocellaris
ENSMLUG00000009088	-	82	93.932	ENSAPEG00000012623	polr2a	82	93.924	Amphiprion_percula
ENSMLUG00000009088	-	82	93.932	ENSATEG00000019644	polr2a	82	93.924	Anabas_testudineus
ENSMLUG00000009088	-	100	97.921	ENSACAG00000014561	POLR2A	100	97.921	Anolis_carolinensis
ENSMLUG00000009088	-	100	99.493	ENSANAG00000020093	-	100	99.493	Aotus_nancymaae
ENSMLUG00000009088	-	82	93.746	ENSACLG00000006735	polr2a	82	93.738	Astatotilapia_calliptera
ENSMLUG00000009088	-	82	94.180	ENSAMXG00000020046	polr2a	82	94.172	Astyanax_mexicanus
ENSMLUG00000009088	-	100	99.442	ENSBTAG00000046765	POLR2A	100	99.442	Bos_taurus
ENSMLUG00000009088	-	94	69.693	WBGene00000123	ama-1	99	72.727	Caenorhabditis_elegans
ENSMLUG00000009088	-	100	99.037	ENSCAFG00000016532	POLR2A	100	99.162	Canis_familiaris
ENSMLUG00000009088	-	100	98.530	ENSCAFG00020007929	-	100	98.530	Canis_lupus_dingo
ENSMLUG00000009088	-	100	99.442	ENSCHIG00000027173	-	100	99.442	Capra_hircus
ENSMLUG00000009088	-	100	97.008	ENSTSYG00000012803	-	100	97.515	Carlito_syrichta
ENSMLUG00000009088	-	98	95.058	ENSCAPG00000001882	-	98	97.913	Cavia_aperea
ENSMLUG00000009088	-	100	95.142	ENSCPOG00000014812	-	98	97.953	Cavia_porcellus
ENSMLUG00000009088	-	100	99.493	ENSCCAG00000020938	-	100	99.493	Cebus_capucinus
ENSMLUG00000009088	-	100	99.442	ENSCATG00000013680	-	100	99.442	Cercocebus_atys
ENSMLUG00000009088	-	100	99.341	ENSCLAG00000012196	-	100	99.341	Chinchilla_lanigera
ENSMLUG00000009088	-	82	90.259	ENSCSAG00000011644	-	82	90.259	Chlorocebus_sabaeus
ENSMLUG00000009088	-	100	93.560	ENSCPBG00000012697	POLR2A	100	93.560	Chrysemys_picta_bellii
ENSMLUG00000009088	-	99	75.971	ENSCING00000007884	-	99	76.223	Ciona_intestinalis
ENSMLUG00000009088	-	95	83.333	ENSCSAVG00000008334	-	99	83.871	Ciona_savignyi
ENSMLUG00000009088	-	100	98.783	ENSCANG00000010622	-	100	98.783	Colobus_angolensis_palliatus
ENSMLUG00000009088	-	100	93.863	ENSCGRG00001003538	Polr2a	100	94.165	Cricetulus_griseus_chok1gshd
ENSMLUG00000009088	-	82	95.527	ENSCGRG00000012105	Polr2a	95	95.466	Cricetulus_griseus_crigri
ENSMLUG00000009088	-	82	93.313	ENSCSEG00000002635	polr2a	82	93.304	Cynoglossus_semilaevis
ENSMLUG00000009088	-	82	94.056	ENSCVAG00000005156	polr2a	82	94.048	Cyprinodon_variegatus
ENSMLUG00000009088	-	82	93.874	ENSDARG00000099966	polr2a	82	93.866	Danio_rerio
ENSMLUG00000009088	-	100	96.552	ENSDNOG00000016482	-	100	96.552	Dasypus_novemcinctus
ENSMLUG00000009088	-	100	99.493	ENSDORG00000008667	Polr2a	100	99.493	Dipodomys_ordii
ENSMLUG00000009088	-	99	69.551	FBgn0003277	RpII215	99	74.298	Drosophila_melanogaster
ENSMLUG00000009088	-	94	88.028	ENSETEG00000002540	-	94	84.646	Echinops_telfairi
ENSMLUG00000009088	-	81	87.671	ENSEBUG00000013967	polr2a	82	87.081	Eptatretus_burgeri
ENSMLUG00000009088	-	100	96.450	ENSEASG00005019114	-	100	96.552	Equus_asinus_asinus
ENSMLUG00000009088	-	100	99.442	ENSECAG00000018485	POLR2A	100	99.442	Equus_caballus
ENSMLUG00000009088	-	87	99.133	ENSEEUG00000001154	-	95	99.133	Erinaceus_europaeus
ENSMLUG00000009088	-	89	89.415	ENSELUG00000014284	polr2a	84	90.080	Esox_lucius
ENSMLUG00000009088	-	100	99.442	ENSFDAG00000008287	-	100	99.442	Fukomys_damarensis
ENSMLUG00000009088	-	85	94.056	ENSFHEG00000001768	polr2a	99	94.048	Fundulus_heteroclitus
ENSMLUG00000009088	-	99	89.771	ENSGMOG00000007725	polr2a	100	100.000	Gadus_morhua
ENSMLUG00000009088	-	98	94.366	ENSGAFG00000005389	polr2a	99	91.816	Gambusia_affinis
ENSMLUG00000009088	-	99	90.278	ENSGACG00000019366	polr2a	100	87.789	Gasterosteus_aculeatus
ENSMLUG00000009088	-	100	97.672	ENSGGOG00000014800	-	100	97.672	Gorilla_gorilla
ENSMLUG00000009088	-	85	93.746	ENSHBUG00000018937	polr2a	99	93.738	Haplochromis_burtoni
ENSMLUG00000009088	-	100	99.442	ENSHGLG00000012381	POLR2A	100	99.442	Heterocephalus_glaber_female
ENSMLUG00000009088	-	100	99.442	ENSHGLG00100014843	POLR2A	100	99.442	Heterocephalus_glaber_male
ENSMLUG00000009088	-	82	93.313	ENSHCOG00000011874	polr2a	82	93.304	Hippocampus_comes
ENSMLUG00000009088	-	82	93.560	ENSIPUG00000002613	Polr2a	82	93.552	Ictalurus_punctatus
ENSMLUG00000009088	-	100	99.493	ENSSTOG00000001304	-	100	99.493	Ictidomys_tridecemlineatus
ENSMLUG00000009088	-	100	99.391	ENSJJAG00000013049	Polr2a	100	99.391	Jaculus_jaculus
ENSMLUG00000009088	-	80	84.799	ENSKMAG00000016343	polr2a	86	89.286	Kryptolebias_marmoratus
ENSMLUG00000009088	-	82	93.684	ENSLBEG00000027652	polr2a	82	93.676	Labrus_bergylta
ENSMLUG00000009088	-	80	86.545	ENSLACG00000012071	POLR2A	81	86.599	Latimeria_chalumnae
ENSMLUG00000009088	-	91	94.217	ENSLOCG00000013863	polr2a	99	93.921	Lepisosteus_oculatus
ENSMLUG00000009088	-	100	99.442	ENSLAFG00000008626	-	100	99.442	Loxodonta_africana
ENSMLUG00000009088	-	50	97.452	ENSMFAG00000007042	-	99	97.452	Macaca_fascicularis
ENSMLUG00000009088	-	100	99.442	ENSMMUG00000023620	-	100	99.442	Macaca_mulatta
ENSMLUG00000009088	-	100	98.737	ENSMNEG00000040407	-	100	98.737	Macaca_nemestrina
ENSMLUG00000009088	-	99	94.521	ENSMLEG00000030263	-	99	97.452	Mandrillus_leucophaeus
ENSMLUG00000009088	-	82	93.808	ENSMAMG00000003351	polr2a	82	93.800	Mastacembelus_armatus
ENSMLUG00000009088	-	82	93.746	ENSMZEG00005021429	polr2a	82	93.738	Maylandia_zebra
ENSMLUG00000009088	-	50	99.084	ENSMAUG00000021055	-	99	99.084	Mesocricetus_auratus
ENSMLUG00000009088	-	100	99.391	ENSMICG00000013372	-	100	99.391	Microcebus_murinus
ENSMLUG00000009088	-	100	92.734	ENSMOCG00000018279	Polr2a	100	92.938	Microtus_ochrogaster
ENSMLUG00000009088	-	87	93.189	ENSMMOG00000012515	polr2a	95	93.180	Mola_mola
ENSMLUG00000009088	-	100	99.037	ENSMODG00000007009	-	100	99.037	Monodelphis_domestica
ENSMLUG00000009088	-	94	91.100	ENSMALG00000008716	polr2a	99	91.754	Monopterus_albus
ENSMLUG00000009088	-	100	99.442	MGP_CAROLIEiJ_G0016587	Polr2a	100	99.442	Mus_caroli
ENSMLUG00000009088	-	100	99.442	ENSMUSG00000005198	Polr2a	100	99.442	Mus_musculus
ENSMLUG00000009088	-	100	97.676	MGP_PahariEiJ_G0017718	Polr2a	100	97.676	Mus_pahari
ENSMLUG00000009088	-	100	99.442	MGP_SPRETEiJ_G0017423	Polr2a	100	99.442	Mus_spretus
ENSMLUG00000009088	-	100	99.391	ENSMPUG00000009648	-	100	99.391	Mustela_putorius_furo
ENSMLUG00000009088	-	100	99.493	ENSNGAG00000002543	Polr2a	100	99.493	Nannospalax_galili
ENSMLUG00000009088	-	82	91.703	ENSNBRG00000002005	polr2a	81	91.692	Neolamprologus_brichardi
ENSMLUG00000009088	-	100	98.279	ENSNLEG00000009460	-	100	98.279	Nomascus_leucogenys
ENSMLUG00000009088	-	94	98.769	ENSMEUG00000008611	-	93	98.769	Notamacropus_eugenii
ENSMLUG00000009088	-	80	99.117	ENSOPRG00000015116	-	99	99.117	Ochotona_princeps
ENSMLUG00000009088	-	100	91.797	ENSODEG00000017674	-	100	94.675	Octodon_degus
ENSMLUG00000009088	-	82	93.932	ENSONIG00000009231	polr2a	82	93.924	Oreochromis_niloticus
ENSMLUG00000009088	-	100	96.908	ENSOCUG00000017929	-	100	97.198	Oryctolagus_cuniculus
ENSMLUG00000009088	-	82	93.684	ENSORLG00000006431	polr2a	82	93.676	Oryzias_latipes
ENSMLUG00000009088	-	82	93.684	ENSORLG00020010235	polr2a	82	93.676	Oryzias_latipes_hni
ENSMLUG00000009088	-	82	93.684	ENSORLG00015007075	polr2a	82	93.676	Oryzias_latipes_hsok
ENSMLUG00000009088	-	92	93.793	ENSOMEG00000010713	polr2a	100	93.793	Oryzias_melastigma
ENSMLUG00000009088	-	100	99.341	ENSOGAG00000033608	-	100	99.341	Otolemur_garnettii
ENSMLUG00000009088	-	98	99.260	ENSOARG00000013874	-	100	99.260	Ovis_aries
ENSMLUG00000009088	-	93	96.631	ENSPPAG00000043734	-	100	96.907	Pan_paniscus
ENSMLUG00000009088	-	100	98.279	ENSPTRG00000008691	POLR2A	100	98.279	Pan_troglodytes
ENSMLUG00000009088	-	100	98.783	ENSPANG00000024099	-	100	98.783	Papio_anubis
ENSMLUG00000009088	-	77	92.793	ENSPKIG00000005727	polr2a	85	82.000	Paramormyrops_kingsleyae
ENSMLUG00000009088	-	98	95.876	ENSPSIG00000014006	POLR2A	100	95.876	Pelodiscus_sinensis
ENSMLUG00000009088	-	100	93.746	ENSPMGG00000019734	polr2a	99	94.172	Periophthalmus_magnuspinnatus
ENSMLUG00000009088	-	100	99.493	ENSPEMG00000012521	Polr2a	100	99.493	Peromyscus_maniculatus_bairdii
ENSMLUG00000009088	-	86	98.823	ENSPCIG00000028851	-	82	98.823	Phascolarctos_cinereus
ENSMLUG00000009088	-	85	93.994	ENSPFOG00000007890	polr2a	99	93.986	Poecilia_formosa
ENSMLUG00000009088	-	85	93.994	ENSPLAG00000007399	polr2a	99	93.986	Poecilia_latipinna
ENSMLUG00000009088	-	85	93.994	ENSPMEG00000002071	polr2a	99	93.986	Poecilia_mexicana
ENSMLUG00000009088	-	82	93.932	ENSPREG00000013122	polr2a	82	93.924	Poecilia_reticulata
ENSMLUG00000009088	-	100	96.302	ENSPPYG00000007924	-	100	98.430	Pongo_abelii
ENSMLUG00000009088	-	92	99.429	ENSPCAG00000006951	-	92	99.429	Procavia_capensis
ENSMLUG00000009088	-	100	98.289	ENSPCOG00000025260	-	100	98.289	Propithecus_coquereli
ENSMLUG00000009088	-	100	99.239	ENSPVAG00000005069	-	100	99.239	Pteropus_vampyrus
ENSMLUG00000009088	-	82	93.808	ENSPNYG00000022340	polr2a	82	93.800	Pundamilia_nyererei
ENSMLUG00000009088	-	82	93.994	ENSPNAG00000011237	polr2a	82	93.986	Pygocentrus_nattereri
ENSMLUG00000009088	-	100	99.391	ENSRNOG00000028834	Polr2a	100	99.391	Rattus_norvegicus
ENSMLUG00000009088	-	82	98.946	ENSRBIG00000002471	-	100	96.045	Rhinopithecus_bieti
ENSMLUG00000009088	-	100	99.087	ENSRROG00000029583	-	100	99.087	Rhinopithecus_roxellana
ENSMLUG00000009088	-	83	88.000	YDL140C	RPO21	99	80.180	Saccharomyces_cerevisiae
ENSMLUG00000009088	-	100	99.493	ENSSBOG00000000808	-	100	99.493	Saimiri_boliviensis_boliviensis
ENSMLUG00000009088	-	92	98.822	ENSSHAG00000002858	-	100	96.552	Sarcophilus_harrisii
ENSMLUG00000009088	-	82	93.932	ENSSFOG00015023275	polr2a	82	93.924	Scleropages_formosus
ENSMLUG00000009088	-	82	93.313	ENSSMAG00000009137	polr2a	82	93.304	Scophthalmus_maximus
ENSMLUG00000009088	-	82	93.932	ENSSDUG00000020466	polr2a	82	93.924	Seriola_dumerili
ENSMLUG00000009088	-	82	93.932	ENSSLDG00000020613	polr2a	82	93.924	Seriola_lalandi_dorsalis
ENSMLUG00000009088	-	97	94.504	ENSSARG00000005875	-	99	94.504	Sorex_araneus
ENSMLUG00000009088	-	100	93.870	ENSSPAG00000016741	polr2a	94	93.862	Stegastes_partitus
ENSMLUG00000009088	-	100	98.732	ENSSSCG00000028278	-	100	98.732	Sus_scrofa
ENSMLUG00000009088	-	99	88.119	ENSTRUG00000012320	polr2a	81	88.104	Takifugu_rubripes
ENSMLUG00000009088	-	99	92.322	ENSTNIG00000010136	polr2a	100	92.312	Tetraodon_nigroviridis
ENSMLUG00000009088	-	74	99.737	ENSTBEG00000013294	-	58	99.737	Tupaia_belangeri
ENSMLUG00000009088	-	100	98.022	ENSTTRG00000014273	-	100	98.022	Tursiops_truncatus
ENSMLUG00000009088	-	96	96.289	ENSUAMG00000014866	-	100	98.949	Ursus_americanus
ENSMLUG00000009088	-	99	97.325	ENSUMAG00000015732	-	100	97.325	Ursus_maritimus
ENSMLUG00000009088	-	65	100.000	ENSVPAG00000008842	-	76	100.000	Vicugna_pacos
ENSMLUG00000009088	-	100	96.101	ENSVVUG00000027878	-	100	98.022	Vulpes_vulpes
ENSMLUG00000009088	-	99	96.462	ENSXETG00000012465	polr2a	100	96.462	Xenopus_tropicalis
ENSMLUG00000009088	-	90	92.105	ENSXCOG00000001804	polr2a	94	91.754	Xiphophorus_couchianus
ENSMLUG00000009088	-	82	93.932	ENSXMAG00000015687	polr2a	82	93.924	Xiphophorus_maculatus