EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000009124 (Gene tree)
Gene ID: -
Gene Symbol: SNRPD1
Alias: HsT2456|SNRPD|Sm-D1
Full Name: small nuclear ribonucleoprotein D1 polypeptide
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 19103 bases
Position: chrGL429967:626378-645480
Accession: 11158
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000008302	LSM	PF01423.22	5.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000009113	SNRPD1-201	387	-	ENSMLUP00000008302	129 (aa)	-	G1PCY8

Gene Model

Click here to download ENSMLUG00000009124's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000009124's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000009124	SNRPD1	58	30.667	ENSMLUG00000023895	LSM10	58	30.986

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000009124	SNRPD1	90	97.414	ENSG00000167088	SNRPD1	99	97.297	Homo_sapiens
ENSMLUG00000009124	SNRPD1	73	94.681	ENSAPOG00000019446	snrpd1	51	94.681	Acanthochromis_polyacanthus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSAMEG00000002576	SNRPD1	99	97.414	Ailuropoda_melanoleuca
ENSMLUG00000009124	SNRPD1	84	96.330	ENSACIG00000011263	snrpd1	97	96.330	Amphilophus_citrinellus
ENSMLUG00000009124	SNRPD1	73	94.681	ENSAOCG00000007406	snrpd1	79	94.681	Amphiprion_ocellaris
ENSMLUG00000009124	SNRPD1	73	89.362	ENSAPEG00000014961	snrpd1	78	89.362	Amphiprion_percula
ENSMLUG00000009124	SNRPD1	84	96.330	ENSAPEG00000012539	SNRPD1	97	96.330	Amphiprion_percula
ENSMLUG00000009124	SNRPD1	84	96.330	ENSATEG00000014399	snrpd1	97	96.330	Anabas_testudineus
ENSMLUG00000009124	SNRPD1	88	98.246	ENSAPLG00000012256	SNRPD1	96	98.246	Anas_platyrhynchos
ENSMLUG00000009124	SNRPD1	90	97.414	ENSACAG00000006364	SNRPD1	97	97.414	Anolis_carolinensis
ENSMLUG00000009124	SNRPD1	90	97.414	ENSANAG00000025641	SNRPD1	97	97.414	Aotus_nancymaae
ENSMLUG00000009124	SNRPD1	84	96.330	ENSACLG00000017406	snrpd1	97	96.330	Astatotilapia_calliptera
ENSMLUG00000009124	SNRPD1	88	96.491	ENSAMXG00000004589	snrpd1	96	96.491	Astyanax_mexicanus
ENSMLUG00000009124	SNRPD1	73	94.681	ENSBTAG00000055316	-	81	94.681	Bos_taurus
ENSMLUG00000009124	SNRPD1	73	95.745	ENSBTAG00000047266	-	79	95.745	Bos_taurus
ENSMLUG00000009124	SNRPD1	73	96.809	ENSBTAG00000012376	-	70	96.809	Bos_taurus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSBTAG00000008292	SNRPD1	97	97.414	Bos_taurus
ENSMLUG00000009124	SNRPD1	67	79.070	WBGene00004916	snr-3	75	74.468	Caenorhabditis_elegans
ENSMLUG00000009124	SNRPD1	90	97.414	ENSCJAG00000042955	SNRPD1	97	97.414	Callithrix_jacchus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSCAFG00000018247	SNRPD1	97	97.414	Canis_familiaris
ENSMLUG00000009124	SNRPD1	72	98.925	ENSCAFG00020015914	SNRPD1	73	98.925	Canis_lupus_dingo
ENSMLUG00000009124	SNRPD1	91	98.291	ENSCHIG00000005557	SNRPD1	98	98.291	Capra_hircus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSTSYG00000030028	SNRPD1	97	97.414	Carlito_syrichta
ENSMLUG00000009124	SNRPD1	88	98.230	ENSCAPG00000008103	SNRPD1	97	98.230	Cavia_aperea
ENSMLUG00000009124	SNRPD1	90	97.414	ENSCPOG00000004679	SNRPD1	97	98.230	Cavia_porcellus
ENSMLUG00000009124	SNRPD1	73	94.681	ENSCCAG00000005390	-	79	94.681	Cebus_capucinus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSCCAG00000032658	SNRPD1	97	97.414	Cebus_capucinus
ENSMLUG00000009124	SNRPD1	90	96.552	ENSCCAG00000020611	-	97	96.552	Cebus_capucinus
ENSMLUG00000009124	SNRPD1	73	94.681	ENSCCAG00000016652	-	79	94.681	Cebus_capucinus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSCATG00000039978	SNRPD1	97	97.414	Cercocebus_atys
ENSMLUG00000009124	SNRPD1	90	97.414	ENSCLAG00000008691	SNRPD1	97	97.414	Chinchilla_lanigera
ENSMLUG00000009124	SNRPD1	90	97.414	ENSCSAG00000017654	SNRPD1	97	97.414	Chlorocebus_sabaeus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSCPBG00000023143	SNRPD1	97	97.414	Chrysemys_picta_bellii
ENSMLUG00000009124	SNRPD1	65	86.905	ENSCING00000024100	-	67	86.905	Ciona_intestinalis
ENSMLUG00000009124	SNRPD1	66	84.706	ENSCSAVG00000004578	-	68	84.706	Ciona_savignyi
ENSMLUG00000009124	SNRPD1	91	96.581	ENSCGRG00001021055	-	97	97.414	Cricetulus_griseus_chok1gshd
ENSMLUG00000009124	SNRPD1	73	74.468	ENSCGRG00001009945	-	83	74.468	Cricetulus_griseus_chok1gshd
ENSMLUG00000009124	SNRPD1	73	74.468	ENSCGRG00000006224	-	83	74.468	Cricetulus_griseus_crigri
ENSMLUG00000009124	SNRPD1	91	96.581	ENSCGRG00000000490	-	97	97.414	Cricetulus_griseus_crigri
ENSMLUG00000009124	SNRPD1	72	93.548	ENSCSEG00000018141	snrpd1	79	93.617	Cynoglossus_semilaevis
ENSMLUG00000009124	SNRPD1	73	94.681	ENSCVAG00000000534	snrpd1	79	94.681	Cyprinodon_variegatus
ENSMLUG00000009124	SNRPD1	88	96.491	ENSDARG00000011648	snrpd1	96	96.491	Danio_rerio
ENSMLUG00000009124	SNRPD1	90	97.414	ENSDNOG00000040310	SNRPD1	97	97.414	Dasypus_novemcinctus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSDORG00000008349	Snrpd1	97	97.414	Dipodomys_ordii
ENSMLUG00000009124	SNRPD1	71	81.522	FBgn0261933	SmD1	74	81.522	Drosophila_melanogaster
ENSMLUG00000009124	SNRPD1	67	97.701	ENSETEG00000011689	SNRPD1	73	97.701	Echinops_telfairi
ENSMLUG00000009124	SNRPD1	73	90.426	ENSEBUG00000003170	snrpd1	91	90.217	Eptatretus_burgeri
ENSMLUG00000009124	SNRPD1	84	100.000	ENSEASG00005002433	SNRPD1	97	100.000	Equus_asinus_asinus
ENSMLUG00000009124	SNRPD1	84	100.000	ENSECAG00000014373	SNRPD1	97	100.000	Equus_caballus
ENSMLUG00000009124	SNRPD1	69	100.000	ENSEEUG00000004987	SNRPD1	100	100.000	Erinaceus_europaeus
ENSMLUG00000009124	SNRPD1	84	84.404	ENSELUG00000000088	snrpd1	77	94.565	Esox_lucius
ENSMLUG00000009124	SNRPD1	90	97.414	ENSFCAG00000012352	SNRPD1	97	97.414	Felis_catus
ENSMLUG00000009124	SNRPD1	84	100.000	ENSFALG00000002646	SNRPD1	97	100.000	Ficedula_albicollis
ENSMLUG00000009124	SNRPD1	88	96.491	ENSGMOG00000015607	snrpd1	96	96.491	Gadus_morhua
ENSMLUG00000009124	SNRPD1	90	97.414	ENSGALG00000041334	SNRPD1	97	97.414	Gallus_gallus
ENSMLUG00000009124	SNRPD1	73	94.681	ENSGAFG00000011171	snrpd1	79	94.681	Gambusia_affinis
ENSMLUG00000009124	SNRPD1	88	96.491	ENSGACG00000005201	SNRPD1	96	96.491	Gasterosteus_aculeatus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSGAGG00000011197	SNRPD1	97	97.414	Gopherus_agassizii
ENSMLUG00000009124	SNRPD1	91	83.898	ENSGGOG00000026706	-	78	93.617	Gorilla_gorilla
ENSMLUG00000009124	SNRPD1	90	97.414	ENSGGOG00000041053	SNRPD1	97	97.414	Gorilla_gorilla
ENSMLUG00000009124	SNRPD1	73	94.681	ENSHBUG00000003236	snrpd1	79	94.681	Haplochromis_burtoni
ENSMLUG00000009124	SNRPD1	90	97.414	ENSHGLG00000007152	SNRPD1	97	97.414	Heterocephalus_glaber_female
ENSMLUG00000009124	SNRPD1	90	97.414	ENSHGLG00100008618	SNRPD1	97	97.414	Heterocephalus_glaber_male
ENSMLUG00000009124	SNRPD1	73	94.681	ENSIPUG00000003576	snrpd1	79	94.681	Ictalurus_punctatus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSSTOG00000000485	SNRPD1	97	97.414	Ictidomys_tridecemlineatus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSJJAG00000017698	Snrpd1	97	97.414	Jaculus_jaculus
ENSMLUG00000009124	SNRPD1	73	94.681	ENSKMAG00000005987	snrpd1	79	94.681	Kryptolebias_marmoratus
ENSMLUG00000009124	SNRPD1	73	94.681	ENSLBEG00000003327	snrpd1	79	94.681	Labrus_bergylta
ENSMLUG00000009124	SNRPD1	90	97.414	ENSLACG00000001955	SNRPD1	97	97.414	Latimeria_chalumnae
ENSMLUG00000009124	SNRPD1	90	95.690	ENSLOCG00000002003	snrpd1	99	95.690	Lepisosteus_oculatus
ENSMLUG00000009124	SNRPD1	90	98.276	ENSLAFG00000005819	SNRPD1	98	98.276	Loxodonta_africana
ENSMLUG00000009124	SNRPD1	90	97.414	ENSMFAG00000042080	SNRPD1	97	97.414	Macaca_fascicularis
ENSMLUG00000009124	SNRPD1	90	96.552	ENSMMUG00000003992	SNRPD1	99	96.552	Macaca_mulatta
ENSMLUG00000009124	SNRPD1	90	97.414	ENSMNEG00000041296	SNRPD1	97	97.414	Macaca_nemestrina
ENSMLUG00000009124	SNRPD1	90	97.414	ENSMLEG00000028659	SNRPD1	97	97.414	Mandrillus_leucophaeus
ENSMLUG00000009124	SNRPD1	73	94.681	ENSMAMG00000012971	snrpd1	79	94.681	Mastacembelus_armatus
ENSMLUG00000009124	SNRPD1	73	94.681	ENSMZEG00005004685	snrpd1	79	94.681	Maylandia_zebra
ENSMLUG00000009124	SNRPD1	91	96.610	ENSMGAG00000011598	SNRPD1	98	96.610	Meleagris_gallopavo
ENSMLUG00000009124	SNRPD1	73	82.979	ENSMAUG00000016502	-	85	82.979	Mesocricetus_auratus
ENSMLUG00000009124	SNRPD1	73	82.979	ENSMAUG00000016467	-	85	82.979	Mesocricetus_auratus
ENSMLUG00000009124	SNRPD1	77	93.939	ENSMAUG00000006829	-	63	93.939	Mesocricetus_auratus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSMICG00000044066	SNRPD1	97	97.414	Microcebus_murinus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSMOCG00000017367	Snrpd1	97	97.414	Microtus_ochrogaster
ENSMLUG00000009124	SNRPD1	73	94.681	ENSMMOG00000019089	snrpd1	79	94.681	Mola_mola
ENSMLUG00000009124	SNRPD1	90	97.414	ENSMODG00000021487	SNRPD1	96	100.000	Monodelphis_domestica
ENSMLUG00000009124	SNRPD1	73	94.681	ENSMALG00000014459	snrpd1	79	94.681	Monopterus_albus
ENSMLUG00000009124	SNRPD1	90	97.414	MGP_CAROLIEiJ_G0021994	Snrpd1	97	97.414	Mus_caroli
ENSMLUG00000009124	SNRPD1	90	97.414	ENSMUSG00000002477	Snrpd1	97	97.414	Mus_musculus
ENSMLUG00000009124	SNRPD1	90	97.414	MGP_PahariEiJ_G0018731	Snrpd1	97	97.414	Mus_pahari
ENSMLUG00000009124	SNRPD1	90	97.414	MGP_SPRETEiJ_G0022910	Snrpd1	97	97.414	Mus_spretus
ENSMLUG00000009124	SNRPD1	88	98.246	ENSMPUG00000020041	-	96	98.246	Mustela_putorius_furo
ENSMLUG00000009124	SNRPD1	90	97.414	ENSMPUG00000005567	-	99	97.414	Mustela_putorius_furo
ENSMLUG00000009124	SNRPD1	90	97.414	ENSNGAG00000023946	Snrpd1	97	97.414	Nannospalax_galili
ENSMLUG00000009124	SNRPD1	71	94.565	ENSNBRG00000012119	snrpd1	76	94.565	Neolamprologus_brichardi
ENSMLUG00000009124	SNRPD1	90	94.828	ENSNLEG00000031430	SNRPD1	97	94.828	Nomascus_leucogenys
ENSMLUG00000009124	SNRPD1	90	97.414	ENSODEG00000005764	SNRPD1	97	97.414	Octodon_degus
ENSMLUG00000009124	SNRPD1	73	94.681	ENSONIG00000002486	snrpd1	79	94.681	Oreochromis_niloticus
ENSMLUG00000009124	SNRPD1	76	88.776	ENSOANG00000004638	-	82	88.776	Ornithorhynchus_anatinus
ENSMLUG00000009124	SNRPD1	88	98.246	ENSOCUG00000014399	-	96	98.246	Oryctolagus_cuniculus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSOCUG00000023761	-	99	97.414	Oryctolagus_cuniculus
ENSMLUG00000009124	SNRPD1	84	96.330	ENSORLG00000012516	snrpd1	97	96.330	Oryzias_latipes
ENSMLUG00000009124	SNRPD1	73	94.681	ENSORLG00020005743	snrpd1	79	94.681	Oryzias_latipes_hni
ENSMLUG00000009124	SNRPD1	73	94.681	ENSORLG00015013402	snrpd1	79	94.681	Oryzias_latipes_hsok
ENSMLUG00000009124	SNRPD1	73	94.681	ENSOMEG00000011571	snrpd1	79	94.681	Oryzias_melastigma
ENSMLUG00000009124	SNRPD1	90	96.552	ENSOGAG00000007833	SNRPD1	97	96.552	Otolemur_garnettii
ENSMLUG00000009124	SNRPD1	83	99.065	ENSOARG00000003413	-	80	99.065	Ovis_aries
ENSMLUG00000009124	SNRPD1	90	97.414	ENSPPAG00000042593	SNRPD1	97	97.414	Pan_paniscus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSPPRG00000002399	SNRPD1	97	97.414	Panthera_pardus
ENSMLUG00000009124	SNRPD1	78	68.000	ENSPPRG00000005009	-	79	68.000	Panthera_pardus
ENSMLUG00000009124	SNRPD1	86	100.000	ENSPTIG00000013206	SNRPD1	97	100.000	Panthera_tigris_altaica
ENSMLUG00000009124	SNRPD1	90	97.414	ENSPTRG00000009909	SNRPD1	97	97.414	Pan_troglodytes
ENSMLUG00000009124	SNRPD1	78	93.000	ENSPTRG00000050159	-	85	93.000	Pan_troglodytes
ENSMLUG00000009124	SNRPD1	90	97.414	ENSPANG00000023478	SNRPD1	97	97.414	Papio_anubis
ENSMLUG00000009124	SNRPD1	69	94.382	ENSPKIG00000021610	snrpd1	79	95.455	Paramormyrops_kingsleyae
ENSMLUG00000009124	SNRPD1	90	94.828	ENSPKIG00000003985	SNRPD1	97	94.828	Paramormyrops_kingsleyae
ENSMLUG00000009124	SNRPD1	73	94.681	ENSPMGG00000001862	snrpd1	79	94.681	Periophthalmus_magnuspinnatus
ENSMLUG00000009124	SNRPD1	91	96.581	ENSPEMG00000014773	-	97	97.414	Peromyscus_maniculatus_bairdii
ENSMLUG00000009124	SNRPD1	78	82.353	ENSPMAG00000003938	-	84	82.353	Petromyzon_marinus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSPCIG00000020320	SNRPD1	97	100.000	Phascolarctos_cinereus
ENSMLUG00000009124	SNRPD1	73	94.681	ENSPFOG00000012448	SNRPD1	83	94.681	Poecilia_formosa
ENSMLUG00000009124	SNRPD1	73	94.681	ENSPLAG00000006738	snrpd1	83	94.681	Poecilia_latipinna
ENSMLUG00000009124	SNRPD1	73	94.681	ENSPMEG00000021942	snrpd1	83	94.681	Poecilia_mexicana
ENSMLUG00000009124	SNRPD1	73	94.681	ENSPREG00000007094	snrpd1	79	94.681	Poecilia_reticulata
ENSMLUG00000009124	SNRPD1	90	97.414	ENSPPYG00000025874	SNRPD1	97	97.414	Pongo_abelii
ENSMLUG00000009124	SNRPD1	90	97.414	ENSPCOG00000013327	SNRPD1	97	97.414	Propithecus_coquereli
ENSMLUG00000009124	SNRPD1	90	97.414	ENSPVAG00000005511	SNRPD1	78	97.414	Pteropus_vampyrus
ENSMLUG00000009124	SNRPD1	73	94.681	ENSPNAG00000017824	snrpd1	79	94.681	Pygocentrus_nattereri
ENSMLUG00000009124	SNRPD1	90	97.414	ENSRNOG00000013714	Snrpd1	97	97.414	Rattus_norvegicus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSRBIG00000022996	SNRPD1	97	97.414	Rhinopithecus_bieti
ENSMLUG00000009124	SNRPD1	90	97.414	ENSRROG00000027640	SNRPD1	97	97.414	Rhinopithecus_roxellana
ENSMLUG00000009124	SNRPD1	90	97.414	ENSSBOG00000020998	SNRPD1	97	97.414	Saimiri_boliviensis_boliviensis
ENSMLUG00000009124	SNRPD1	90	97.414	ENSSHAG00000011791	SNRPD1	97	97.414	Sarcophilus_harrisii
ENSMLUG00000009124	SNRPD1	73	93.617	ENSSFOG00015022253	-	79	93.617	Scleropages_formosus
ENSMLUG00000009124	SNRPD1	73	93.617	ENSSFOG00015008809	-	79	93.617	Scleropages_formosus
ENSMLUG00000009124	SNRPD1	73	93.617	ENSSMAG00000008765	snrpd1	79	94.382	Scophthalmus_maximus
ENSMLUG00000009124	SNRPD1	71	94.565	ENSSDUG00000010521	snrpd1	78	94.565	Seriola_dumerili
ENSMLUG00000009124	SNRPD1	73	94.681	ENSSLDG00000011858	snrpd1	79	94.681	Seriola_lalandi_dorsalis
ENSMLUG00000009124	SNRPD1	52	100.000	ENSSARG00000004271	SNRPD1	100	100.000	Sorex_araneus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSSPUG00000002824	SNRPD1	97	97.414	Sphenodon_punctatus
ENSMLUG00000009124	SNRPD1	84	96.330	ENSSPAG00000015229	snrpd1	97	96.330	Stegastes_partitus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSSSCG00000003701	SNRPD1	97	100.000	Sus_scrofa
ENSMLUG00000009124	SNRPD1	91	95.726	ENSTGUG00000005095	SNRPD1	98	95.726	Taeniopygia_guttata
ENSMLUG00000009124	SNRPD1	84	96.330	ENSTRUG00000008977	snrpd1	97	96.330	Takifugu_rubripes
ENSMLUG00000009124	SNRPD1	62	90.000	ENSTNIG00000001224	snrpd1	77	90.000	Tetraodon_nigroviridis
ENSMLUG00000009124	SNRPD1	67	97.701	ENSTBEG00000013776	SNRPD1	99	97.701	Tupaia_belangeri
ENSMLUG00000009124	SNRPD1	88	98.246	ENSTTRG00000002654	SNRPD1	99	98.246	Tursiops_truncatus
ENSMLUG00000009124	SNRPD1	86	100.000	ENSUAMG00000013431	SNRPD1	95	100.000	Ursus_americanus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSUMAG00000019740	SNRPD1	97	97.414	Ursus_maritimus
ENSMLUG00000009124	SNRPD1	90	97.414	ENSVPAG00000010056	SNRPD1	78	97.414	Vicugna_pacos
ENSMLUG00000009124	SNRPD1	84	100.000	ENSVVUG00000004009	SNRPD1	97	100.000	Vulpes_vulpes
ENSMLUG00000009124	SNRPD1	90	95.690	ENSXETG00000027354	snrpd1	97	95.690	Xenopus_tropicalis
ENSMLUG00000009124	SNRPD1	73	94.681	ENSXCOG00000020108	snrpd1	79	94.681	Xiphophorus_couchianus
ENSMLUG00000009124	SNRPD1	73	94.681	ENSXMAG00000003368	snrpd1	79	94.681	Xiphophorus_maculatus