EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000009234 (Gene tree)
Gene ID: 102433512
Gene Symbol: -
Alias: -
Full Name: HIV-1 Tat specific factor 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 14855 bases
Position: chrGL429769:3845124-3859978
Accession: 102433512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000008409	RRM_1	PF00076.22	1e-16	1	2
ENSMLUP00000008409	RRM_1	PF00076.22	1e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000009227	-	2169	XM_006082044	ENSMLUP00000008409	722 (aa)	XP_006082106	G1PD81

Gene Model

Click here to download ENSMLUG00000009234's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000009234's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000009234	-	98	75.464	ENSMLUG00000028418	-	99	74.900

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000009234	-	98	72.533	ENSG00000102241	HTATSF1	100	86.996	Homo_sapiens
ENSMLUG00000009234	-	55	59.759	ENSAPOG00000009823	htatsf1	90	59.759	Acanthochromis_polyacanthus
ENSMLUG00000009234	-	98	71.688	ENSAMEG00000002921	HTATSF1	99	71.782	Ailuropoda_melanoleuca
ENSMLUG00000009234	-	54	59.413	ENSACIG00000020459	htatsf1	94	57.541	Amphilophus_citrinellus
ENSMLUG00000009234	-	50	61.979	ENSAOCG00000020994	htatsf1	90	58.865	Amphiprion_ocellaris
ENSMLUG00000009234	-	50	61.979	ENSAPEG00000016432	htatsf1	92	57.343	Amphiprion_percula
ENSMLUG00000009234	-	50	61.780	ENSATEG00000008903	htatsf1	84	61.780	Anabas_testudineus
ENSMLUG00000009234	-	95	61.878	ENSANAG00000027986	-	88	63.859	Aotus_nancymaae
ENSMLUG00000009234	-	94	70.282	ENSANAG00000025458	-	99	70.851	Aotus_nancymaae
ENSMLUG00000009234	-	54	60.000	ENSACLG00000008096	htatsf1	96	57.955	Astatotilapia_calliptera
ENSMLUG00000009234	-	51	61.578	ENSAMXG00000008387	htatsf1	82	62.435	Astyanax_mexicanus
ENSMLUG00000009234	-	100	64.387	ENSBTAG00000032711	HTATSF1	99	68.322	Bos_taurus
ENSMLUG00000009234	-	98	68.020	ENSBTAG00000054942	HTATSF1	99	70.795	Bos_taurus
ENSMLUG00000009234	-	98	68.020	ENSBTAG00000055212	HTATSF1	99	70.795	Bos_taurus
ENSMLUG00000009234	-	99	71.713	ENSCJAG00000003676	HTATSF1	99	71.640	Callithrix_jacchus
ENSMLUG00000009234	-	98	73.995	ENSCAFG00000023294	HTATSF1	99	74.434	Canis_familiaris
ENSMLUG00000009234	-	98	72.418	ENSCAFG00020024635	HTATSF1	99	72.857	Canis_lupus_dingo
ENSMLUG00000009234	-	98	68.831	ENSCHIG00000000312	HTATSF1	99	71.696	Capra_hircus
ENSMLUG00000009234	-	98	72.897	ENSTSYG00000028876	HTATSF1	99	72.630	Carlito_syrichta
ENSMLUG00000009234	-	98	70.516	ENSCCAG00000025329	-	99	70.014	Cebus_capucinus
ENSMLUG00000009234	-	100	72.222	ENSCCAG00000022701	-	99	72.409	Cebus_capucinus
ENSMLUG00000009234	-	98	72.594	ENSCATG00000029963	HTATSF1	99	72.764	Cercocebus_atys
ENSMLUG00000009234	-	100	68.579	ENSCLAG00000002718	HTATSF1	99	67.643	Chinchilla_lanigera
ENSMLUG00000009234	-	98	72.727	ENSCSAG00000007505	HTATSF1	99	72.630	Chlorocebus_sabaeus
ENSMLUG00000009234	-	52	68.947	ENSCPBG00000026092	HTATSF1	90	68.633	Chrysemys_picta_bellii
ENSMLUG00000009234	-	98	72.727	ENSCANG00000028495	HTATSF1	99	72.630	Colobus_angolensis_palliatus
ENSMLUG00000009234	-	81	68.900	ENSCGRG00001021602	Htatsf1	99	64.304	Cricetulus_griseus_chok1gshd
ENSMLUG00000009234	-	73	62.766	ENSCGRG00000002085	Htatsf1	99	58.626	Cricetulus_griseus_crigri
ENSMLUG00000009234	-	50	63.613	ENSCVAG00000014070	htatsf1	94	58.974	Cyprinodon_variegatus
ENSMLUG00000009234	-	51	60.313	ENSDARG00000056649	htatsf1	83	60.158	Danio_rerio
ENSMLUG00000009234	-	98	69.948	ENSDNOG00000002254	HTATSF1	99	71.070	Dasypus_novemcinctus
ENSMLUG00000009234	-	59	51.064	ENSETEG00000006377	-	69	48.047	Echinops_telfairi
ENSMLUG00000009234	-	54	48.585	ENSEBUG00000001534	htatsf1	84	48.821	Eptatretus_burgeri
ENSMLUG00000009234	-	98	71.613	ENSEASG00005003440	HTATSF1	99	72.775	Equus_asinus_asinus
ENSMLUG00000009234	-	98	71.613	ENSECAG00000009156	HTATSF1	99	72.775	Equus_caballus
ENSMLUG00000009234	-	98	61.316	ENSEEUG00000010668	HTATSF1	87	64.083	Erinaceus_europaeus
ENSMLUG00000009234	-	56	55.787	ENSELUG00000005486	htatsf1	84	57.512	Esox_lucius
ENSMLUG00000009234	-	100	72.549	ENSFCAG00000031924	HTATSF1	99	73.635	Felis_catus
ENSMLUG00000009234	-	98	67.109	ENSFDAG00000008617	HTATSF1	99	67.328	Fukomys_damarensis
ENSMLUG00000009234	-	52	61.069	ENSFHEG00000020286	htatsf1	97	57.208	Fundulus_heteroclitus
ENSMLUG00000009234	-	52	61.111	ENSGAFG00000003041	htatsf1	96	56.982	Gambusia_affinis
ENSMLUG00000009234	-	50	62.895	ENSGACG00000020459	htatsf1	84	62.895	Gasterosteus_aculeatus
ENSMLUG00000009234	-	98	72.533	ENSGGOG00000026072	HTATSF1	99	72.630	Gorilla_gorilla
ENSMLUG00000009234	-	54	59.286	ENSHBUG00000004392	htatsf1	96	57.273	Haplochromis_burtoni
ENSMLUG00000009234	-	97	67.828	ENSHGLG00000005328	HTATSF1	99	66.533	Heterocephalus_glaber_female
ENSMLUG00000009234	-	51	61.140	ENSHCOG00000009056	htatsf1	88	61.140	Hippocampus_comes
ENSMLUG00000009234	-	51	63.243	ENSIPUG00000017828	htatsf1	79	64.247	Ictalurus_punctatus
ENSMLUG00000009234	-	98	68.318	ENSSTOG00000012505	HTATSF1	100	69.120	Ictidomys_tridecemlineatus
ENSMLUG00000009234	-	57	58.430	ENSKMAG00000007622	htatsf1	95	58.295	Kryptolebias_marmoratus
ENSMLUG00000009234	-	51	61.558	ENSLBEG00000001154	htatsf1	93	57.944	Labrus_bergylta
ENSMLUG00000009234	-	51	64.286	ENSLACG00000015989	HTATSF1	84	64.286	Latimeria_chalumnae
ENSMLUG00000009234	-	51	43.603	ENSLOCG00000015118	htatsf1	81	42.228	Lepisosteus_oculatus
ENSMLUG00000009234	-	98	67.862	ENSLAFG00000014307	HTATSF1	99	65.793	Loxodonta_africana
ENSMLUG00000009234	-	98	72.460	ENSMFAG00000044705	HTATSF1	99	72.363	Macaca_fascicularis
ENSMLUG00000009234	-	98	72.460	ENSMMUG00000006450	HTATSF1	99	72.363	Macaca_mulatta
ENSMLUG00000009234	-	98	67.790	ENSMNEG00000024084	HTATSF1	99	70.110	Macaca_nemestrina
ENSMLUG00000009234	-	98	73.333	ENSMLEG00000035511	HTATSF1	99	72.363	Mandrillus_leucophaeus
ENSMLUG00000009234	-	50	63.613	ENSMAMG00000021225	htatsf1	85	63.089	Mastacembelus_armatus
ENSMLUG00000009234	-	54	60.000	ENSMZEG00005000485	htatsf1	96	57.955	Maylandia_zebra
ENSMLUG00000009234	-	100	63.368	ENSMAUG00000007235	Htatsf1	99	65.782	Mesocricetus_auratus
ENSMLUG00000009234	-	98	72.984	ENSMICG00000009348	HTATSF1	99	73.514	Microcebus_murinus
ENSMLUG00000009234	-	100	63.057	ENSMOCG00000023007	-	99	64.163	Microtus_ochrogaster
ENSMLUG00000009234	-	98	63.941	ENSMOCG00000022370	-	95	62.500	Microtus_ochrogaster
ENSMLUG00000009234	-	55	58.019	ENSMMOG00000011013	htatsf1	93	57.857	Mola_mola
ENSMLUG00000009234	-	53	69.974	ENSMODG00000014087	-	84	69.974	Monodelphis_domestica
ENSMLUG00000009234	-	53	58.809	ENSMALG00000019977	htatsf1	88	58.809	Monopterus_albus
ENSMLUG00000009234	-	100	65.040	MGP_CAROLIEiJ_G0033094	Htatsf1	99	66.216	Mus_caroli
ENSMLUG00000009234	-	97	65.013	ENSMUSG00000067873	Htatsf1	99	65.912	Mus_musculus
ENSMLUG00000009234	-	97	65.147	MGP_SPRETEiJ_G0034249	Htatsf1	99	66.045	Mus_spretus
ENSMLUG00000009234	-	100	70.077	ENSMPUG00000001901	HTATSF1	99	70.871	Mustela_putorius_furo
ENSMLUG00000009234	-	97	68.478	ENSNGAG00000017831	Htatsf1	99	68.342	Nannospalax_galili
ENSMLUG00000009234	-	54	60.000	ENSNBRG00000003818	htatsf1	96	57.955	Neolamprologus_brichardi
ENSMLUG00000009234	-	98	72.363	ENSNLEG00000002746	HTATSF1	99	73.494	Nomascus_leucogenys
ENSMLUG00000009234	-	55	68.182	ENSMEUG00000004133	-	95	68.434	Notamacropus_eugenii
ENSMLUG00000009234	-	54	59.854	ENSONIG00000008638	htatsf1	99	55.677	Oreochromis_niloticus
ENSMLUG00000009234	-	100	67.821	ENSOCUG00000012570	HTATSF1	99	70.665	Oryctolagus_cuniculus
ENSMLUG00000009234	-	51	61.183	ENSORLG00000002356	htatsf1	98	50.540	Oryzias_latipes
ENSMLUG00000009234	-	51	61.440	ENSORLG00020017818	htatsf1	93	55.481	Oryzias_latipes_hni
ENSMLUG00000009234	-	51	60.668	ENSORLG00015002268	htatsf1	95	55.936	Oryzias_latipes_hsok
ENSMLUG00000009234	-	51	61.183	ENSOMEG00000007564	htatsf1	93	57.710	Oryzias_melastigma
ENSMLUG00000009234	-	97	70.375	ENSOGAG00000005565	HTATSF1	99	70.916	Otolemur_garnettii
ENSMLUG00000009234	-	98	67.640	ENSOARG00000011215	-	99	70.795	Ovis_aries
ENSMLUG00000009234	-	99	65.947	ENSOARG00000000481	-	99	66.623	Ovis_aries
ENSMLUG00000009234	-	98	72.533	ENSPPAG00000024268	HTATSF1	99	72.630	Pan_paniscus
ENSMLUG00000009234	-	100	72.906	ENSPPRG00000014209	HTATSF1	99	73.867	Panthera_pardus
ENSMLUG00000009234	-	92	72.355	ENSPTIG00000016887	HTATSF1	95	73.381	Panthera_tigris_altaica
ENSMLUG00000009234	-	98	72.533	ENSPTRG00000044591	HTATSF1	99	72.630	Pan_troglodytes
ENSMLUG00000009234	-	98	60.561	ENSPANG00000010946	HTATSF1	99	60.292	Papio_anubis
ENSMLUG00000009234	-	51	65.147	ENSPKIG00000024852	htatsf1	83	65.323	Paramormyrops_kingsleyae
ENSMLUG00000009234	-	51	61.598	ENSPMGG00000006172	htatsf1	84	61.598	Periophthalmus_magnuspinnatus
ENSMLUG00000009234	-	97	66.309	ENSPEMG00000022397	Htatsf1	99	65.737	Peromyscus_maniculatus_bairdii
ENSMLUG00000009234	-	54	65.228	ENSPCIG00000018896	-	88	65.228	Phascolarctos_cinereus
ENSMLUG00000009234	-	59	63.741	ENSPCIG00000030173	-	99	63.741	Phascolarctos_cinereus
ENSMLUG00000009234	-	52	60.859	ENSPFOG00000007871	htatsf1	92	57.209	Poecilia_formosa
ENSMLUG00000009234	-	52	60.354	ENSPLAG00000007532	htatsf1	87	60.354	Poecilia_latipinna
ENSMLUG00000009234	-	52	60.859	ENSPMEG00000000352	htatsf1	95	57.209	Poecilia_mexicana
ENSMLUG00000009234	-	57	57.809	ENSPREG00000007811	htatsf1	95	57.674	Poecilia_reticulata
ENSMLUG00000009234	-	88	74.734	ENSPPYG00000020765	HTATSF1	87	75.305	Pongo_abelii
ENSMLUG00000009234	-	96	66.382	ENSPCAG00000010576	HTATSF1	99	64.993	Procavia_capensis
ENSMLUG00000009234	-	100	70.505	ENSPCOG00000021823	HTATSF1	99	73.128	Propithecus_coquereli
ENSMLUG00000009234	-	98	72.162	ENSPVAG00000010281	HTATSF1	99	73.997	Pteropus_vampyrus
ENSMLUG00000009234	-	54	60.238	ENSPNYG00000016693	htatsf1	96	58.182	Pundamilia_nyererei
ENSMLUG00000009234	-	50	65.289	ENSPNAG00000006166	htatsf1	93	59.903	Pygocentrus_nattereri
ENSMLUG00000009234	-	100	63.995	ENSRNOG00000027761	Htatsf1	99	65.065	Rattus_norvegicus
ENSMLUG00000009234	-	98	63.904	ENSRBIG00000035486	HTATSF1	99	63.952	Rhinopithecus_bieti
ENSMLUG00000009234	-	98	72.460	ENSRROG00000021939	HTATSF1	99	72.497	Rhinopithecus_roxellana
ENSMLUG00000009234	-	98	69.542	ENSSBOG00000017914	-	99	69.137	Saimiri_boliviensis_boliviensis
ENSMLUG00000009234	-	98	72.874	ENSSBOG00000027186	-	99	72.678	Saimiri_boliviensis_boliviensis
ENSMLUG00000009234	-	52	69.271	ENSSHAG00000006440	-	97	69.271	Sarcophilus_harrisii
ENSMLUG00000009234	-	54	67.595	ENSSHAG00000018908	-	88	67.595	Sarcophilus_harrisii
ENSMLUG00000009234	-	52	62.141	ENSSFOG00015012002	htatsf1	81	62.105	Scleropages_formosus
ENSMLUG00000009234	-	51	62.533	ENSSMAG00000002970	htatsf1	95	56.561	Scophthalmus_maximus
ENSMLUG00000009234	-	55	57.381	ENSSLDG00000016880	htatsf1	95	55.658	Seriola_lalandi_dorsalis
ENSMLUG00000009234	-	98	62.759	ENSSARG00000005193	HTATSF1	87	66.980	Sorex_araneus
ENSMLUG00000009234	-	53	65.722	ENSSPUG00000014767	HTATSF1	84	65.722	Sphenodon_punctatus
ENSMLUG00000009234	-	51	62.176	ENSSPAG00000000732	htatsf1	93	58.237	Stegastes_partitus
ENSMLUG00000009234	-	98	67.596	ENSSSCG00000023062	HTATSF1	98	66.932	Sus_scrofa
ENSMLUG00000009234	-	51	62.694	ENSTRUG00000013383	htatsf1	86	62.694	Takifugu_rubripes
ENSMLUG00000009234	-	52	62.437	ENSTNIG00000016140	htatsf1	87	62.087	Tetraodon_nigroviridis
ENSMLUG00000009234	-	85	72.425	ENSTTRG00000002269	HTATSF1	99	71.949	Tursiops_truncatus
ENSMLUG00000009234	-	100	73.368	ENSUAMG00000012048	HTATSF1	99	74.069	Ursus_americanus
ENSMLUG00000009234	-	100	71.775	ENSUMAG00000010393	HTATSF1	99	72.432	Ursus_maritimus
ENSMLUG00000009234	-	90	68.950	ENSVPAG00000004569	HTATSF1	99	66.520	Vicugna_pacos
ENSMLUG00000009234	-	98	72.288	ENSVVUG00000024802	HTATSF1	99	72.597	Vulpes_vulpes
ENSMLUG00000009234	-	50	65.160	ENSXETG00000019749	htatsf1	70	65.160	Xenopus_tropicalis
ENSMLUG00000009234	-	57	59.806	ENSXCOG00000006912	htatsf1	95	59.806	Xiphophorus_couchianus
ENSMLUG00000009234	-	57	59.189	ENSXMAG00000000490	htatsf1	94	59.427	Xiphophorus_maculatus