EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000009617 (Gene tree)
Gene ID: -
Gene Symbol: CPSF4L
Alias: -
Full Name: cleavage and polyadenylation specific factor 4 like
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 7371 bases
Position: chrGL429913:56679-64049
Accession: 33632
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000008750	zf-CCCH	PF00642.24	4.2e-19	1	2
ENSMLUP00000008750	zf-CCCH	PF00642.24	4.2e-19	2	2
ENSMLUP00000008750	zf-CCCH_2	PF14608.6	3.9e-06	1	3
ENSMLUP00000008750	zf-CCCH_2	PF14608.6	3.9e-06	2	3
ENSMLUP00000008750	zf-CCCH_2	PF14608.6	3.9e-06	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000009604	CPSF4L-201	537	XM_006094908	ENSMLUP00000008750	179 (aa)	-	G1PE27

Gene Model

Click here to download ENSMLUG00000009617's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000009617's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000009617	CPSF4L	74	68.182	ENSMLUG00000010980	CPSF4	63	68.182

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000009617	CPSF4L	100	77.095	ENSG00000187959	CPSF4L	100	77.095	Homo_sapiens
ENSMLUG00000009617	CPSF4L	99	73.596	ENSAMEG00000002707	CPSF4L	65	73.596	Ailuropoda_melanoleuca
ENSMLUG00000009617	CPSF4L	56	59.406	ENSANAG00000026558	-	65	59.406	Aotus_nancymaae
ENSMLUG00000009617	CPSF4L	91	61.963	ENSCJAG00000019911	CPSF4L	96	61.963	Callithrix_jacchus
ENSMLUG00000009617	CPSF4L	100	74.860	ENSCATG00000044555	CPSF4L	100	74.860	Cercocebus_atys
ENSMLUG00000009617	CPSF4L	100	73.889	ENSCSAG00000004429	CPSF4L	100	73.889	Chlorocebus_sabaeus
ENSMLUG00000009617	CPSF4L	100	74.860	ENSCANG00000035042	CPSF4L	100	74.860	Colobus_angolensis_palliatus
ENSMLUG00000009617	CPSF4L	99	69.101	ENSCGRG00001020079	Cpsf4l	99	69.101	Cricetulus_griseus_chok1gshd
ENSMLUG00000009617	CPSF4L	99	69.101	ENSCGRG00000010419	Cpsf4l	99	69.101	Cricetulus_griseus_crigri
ENSMLUG00000009617	CPSF4L	93	76.048	ENSDNOG00000014458	CPSF4L	87	76.048	Dasypus_novemcinctus
ENSMLUG00000009617	CPSF4L	93	78.916	ENSEASG00005018763	CPSF4L	100	78.916	Equus_asinus_asinus
ENSMLUG00000009617	CPSF4L	93	78.916	ENSECAG00000024813	CPSF4L	100	78.916	Equus_caballus
ENSMLUG00000009617	CPSF4L	98	73.295	ENSFCAG00000004745	CPSF4L	70	73.295	Felis_catus
ENSMLUG00000009617	CPSF4L	100	77.095	ENSGGOG00000026659	CPSF4L	100	77.095	Gorilla_gorilla
ENSMLUG00000009617	CPSF4L	93	72.892	ENSSTOG00000001849	CPSF4L	95	72.892	Ictidomys_tridecemlineatus
ENSMLUG00000009617	CPSF4L	99	73.034	ENSLAFG00000010697	CPSF4L	100	73.034	Loxodonta_africana
ENSMLUG00000009617	CPSF4L	100	74.860	ENSMFAG00000037840	CPSF4L	100	74.860	Macaca_fascicularis
ENSMLUG00000009617	CPSF4L	100	74.860	ENSMMUG00000001271	CPSF4L	100	74.860	Macaca_mulatta
ENSMLUG00000009617	CPSF4L	100	74.860	ENSMNEG00000045419	CPSF4L	100	74.860	Macaca_nemestrina
ENSMLUG00000009617	CPSF4L	100	74.860	ENSMLEG00000038527	CPSF4L	100	74.860	Mandrillus_leucophaeus
ENSMLUG00000009617	CPSF4L	93	71.084	ENSMAUG00000019519	-	100	71.084	Mesocricetus_auratus
ENSMLUG00000009617	CPSF4L	94	76.786	ENSMICG00000007503	CPSF4L	97	76.786	Microcebus_murinus
ENSMLUG00000009617	CPSF4L	75	71.111	ENSMOCG00000015313	-	93	71.111	Microtus_ochrogaster
ENSMLUG00000009617	CPSF4L	91	70.988	ENSMODG00000025672	CPSF4L	100	70.988	Monodelphis_domestica
ENSMLUG00000009617	CPSF4L	93	71.856	MGP_CAROLIEiJ_G0017369	-	73	71.856	Mus_caroli
ENSMLUG00000009617	CPSF4L	93	72.455	ENSMUSG00000018727	Cpsf4l	73	72.455	Mus_musculus
ENSMLUG00000009617	CPSF4L	63	71.930	MGP_PahariEiJ_G0018499	-	75	71.930	Mus_pahari
ENSMLUG00000009617	CPSF4L	63	70.175	MGP_SPRETEiJ_G0018215	-	75	70.175	Mus_spretus
ENSMLUG00000009617	CPSF4L	93	74.251	ENSMPUG00000014276	CPSF4L	100	74.251	Mustela_putorius_furo
ENSMLUG00000009617	CPSF4L	92	75.000	ENSNGAG00000009325	-	96	75.000	Nannospalax_galili
ENSMLUG00000009617	CPSF4L	100	77.095	ENSNLEG00000001420	CPSF4L	100	77.095	Nomascus_leucogenys
ENSMLUG00000009617	CPSF4L	56	73.529	ENSMEUG00000004051	-	100	73.529	Notamacropus_eugenii
ENSMLUG00000009617	CPSF4L	61	69.643	ENSOPRG00000007484	-	83	69.643	Ochotona_princeps
ENSMLUG00000009617	CPSF4L	98	71.591	ENSOCUG00000026495	CPSF4L	79	71.591	Oryctolagus_cuniculus
ENSMLUG00000009617	CPSF4L	82	76.190	ENSPPAG00000037000	-	100	76.190	Pan_paniscus
ENSMLUG00000009617	CPSF4L	58	81.731	ENSPPRG00000001058	CPSF4L	78	67.227	Panthera_pardus
ENSMLUG00000009617	CPSF4L	77	76.642	ENSPTIG00000012676	CPSF4L	84	76.642	Panthera_tigris_altaica
ENSMLUG00000009617	CPSF4L	100	77.095	ENSPTRG00000009598	CPSF4L	100	77.095	Pan_troglodytes
ENSMLUG00000009617	CPSF4L	100	74.860	ENSPANG00000020331	CPSF4L	100	74.860	Papio_anubis
ENSMLUG00000009617	CPSF4L	93	72.289	ENSPEMG00000011680	Cpsf4l	75	69.298	Peromyscus_maniculatus_bairdii
ENSMLUG00000009617	CPSF4L	93	74.096	ENSPCIG00000001889	CPSF4L	98	74.096	Phascolarctos_cinereus
ENSMLUG00000009617	CPSF4L	56	79.412	ENSPPYG00000008589	-	67	79.412	Pongo_abelii
ENSMLUG00000009617	CPSF4L	90	78.261	ENSPCOG00000021801	CPSF4L	91	78.261	Propithecus_coquereli
ENSMLUG00000009617	CPSF4L	57	75.728	ENSPVAG00000006736	CPSF4L	69	75.728	Pteropus_vampyrus
ENSMLUG00000009617	CPSF4L	100	74.302	ENSRBIG00000029048	CPSF4L	97	77.711	Rhinopithecus_bieti
ENSMLUG00000009617	CPSF4L	100	73.743	ENSRROG00000037051	CPSF4L	100	73.743	Rhinopithecus_roxellana
ENSMLUG00000009617	CPSF4L	56	75.490	ENSTTRG00000005243	CPSF4L	68	75.490	Tursiops_truncatus
ENSMLUG00000009617	CPSF4L	75	78.519	ENSUAMG00000007728	CPSF4L	86	78.519	Ursus_americanus
ENSMLUG00000009617	CPSF4L	75	78.519	ENSUMAG00000007869	CPSF4L	86	78.519	Ursus_maritimus