EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000009942 (Gene tree)
Gene ID: 102437969
Gene Symbol: PATZ1
Alias: MAZR|PATZ|RIAZ|ZBTB19|ZNF278|ZSG|dJ400N23
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 17352 bases
Position: chrGL430461:96830-114181
Accession: 102437969
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000009055	zf-C2H2	PF00096.26	1.6e-26	1	5
ENSMLUP00000009055	zf-C2H2	PF00096.26	1.6e-26	2	5
ENSMLUP00000009055	zf-C2H2	PF00096.26	1.6e-26	3	5
ENSMLUP00000009055	zf-C2H2	PF00096.26	1.6e-26	4	5
ENSMLUP00000009055	zf-C2H2	PF00096.26	1.6e-26	5	5
ENSMLUP00000022443	zf-C2H2	PF00096.26	3.1e-20	1	4
ENSMLUP00000022443	zf-C2H2	PF00096.26	3.1e-20	2	4
ENSMLUP00000022443	zf-C2H2	PF00096.26	3.1e-20	3	4
ENSMLUP00000022443	zf-C2H2	PF00096.26	3.1e-20	4	4
ENSMLUP00000009055	zf-met	PF12874.7	1.5e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000025701	PATZ1-201	1926	XM_006105537	ENSMLUP00000022443	641 (aa)	XP_006105599	G1QFG0
ENSMLUT00000009932	PATZ1-202	2061	XM_006105536	ENSMLUP00000009055	687 (aa)	XP_006105598	G1PEV1

Gene Model

Click here to download ENSMLUG00000009942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000009942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000009942	PATZ1	76	35.398	ENSMLUG00000002194	GZF1	85	35.165
ENSMLUG00000009942	PATZ1	62	36.301	ENSMLUG00000003564	-	59	36.301
ENSMLUG00000009942	PATZ1	68	37.607	ENSMLUG00000011089	ZNF236	51	36.585
ENSMLUG00000009942	PATZ1	53	32.941	ENSMLUG00000002042	ZFP1	61	32.886
ENSMLUG00000009942	PATZ1	53	32.948	ENSMLUG00000012039	ZNF317	63	32.948
ENSMLUG00000009942	PATZ1	53	32.189	ENSMLUG00000002894	ZNF454	67	32.189
ENSMLUG00000009942	PATZ1	57	32.195	ENSMLUG00000009276	-	86	32.195
ENSMLUG00000009942	PATZ1	50	31.624	ENSMLUG00000013784	ZNF235	69	30.337
ENSMLUG00000009942	PATZ1	72	35.057	ENSMLUG00000009904	ZBTB49	50	30.247
ENSMLUG00000009942	PATZ1	53	36.875	ENSMLUG00000015757	-	92	30.804
ENSMLUG00000009942	PATZ1	51	31.304	ENSMLUG00000014677	ZNF574	51	31.304
ENSMLUG00000009942	PATZ1	74	39.744	ENSMLUG00000016123	ZBTB14	52	39.744
ENSMLUG00000009942	PATZ1	55	33.108	ENSMLUG00000004199	-	98	33.108
ENSMLUG00000009942	PATZ1	68	32.576	ENSMLUG00000025202	ZBTB17	56	33.143
ENSMLUG00000009942	PATZ1	50	31.325	ENSMLUG00000011734	ZNF81	59	32.365
ENSMLUG00000009942	PATZ1	52	33.158	ENSMLUG00000003693	-	83	33.158
ENSMLUG00000009942	PATZ1	70	34.000	ENSMLUG00000029884	ZBTB24	50	34.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000009942	PATZ1	100	99.064	ENSG00000100105	PATZ1	100	99.064	Homo_sapiens
ENSMLUG00000009942	PATZ1	99	59.847	ENSAPOG00000018447	patz1	100	59.310	Acanthochromis_polyacanthus
ENSMLUG00000009942	PATZ1	100	99.563	ENSAMEG00000007074	PATZ1	100	99.563	Ailuropoda_melanoleuca
ENSMLUG00000009942	PATZ1	100	59.961	ENSACIG00000016779	patz1	100	60.039	Amphilophus_citrinellus
ENSMLUG00000009942	PATZ1	100	57.563	ENSAPEG00000013354	patz1	100	57.762	Amphiprion_percula
ENSMLUG00000009942	PATZ1	100	62.353	ENSATEG00000011260	patz1	100	62.549	Anabas_testudineus
ENSMLUG00000009942	PATZ1	85	91.781	ENSAPLG00000003934	PATZ1	99	90.753	Anas_platyrhynchos
ENSMLUG00000009942	PATZ1	100	99.064	ENSANAG00000029603	PATZ1	100	99.064	Aotus_nancymaae
ENSMLUG00000009942	PATZ1	97	62.524	ENSAMXG00000002273	patz1	98	62.218	Astyanax_mexicanus
ENSMLUG00000009942	PATZ1	100	99.563	ENSBTAG00000005478	PATZ1	100	99.563	Bos_taurus
ENSMLUG00000009942	PATZ1	100	99.064	ENSCJAG00000010978	PATZ1	100	99.064	Callithrix_jacchus
ENSMLUG00000009942	PATZ1	100	99.709	ENSCAFG00000013087	PATZ1	100	99.709	Canis_familiaris
ENSMLUG00000009942	PATZ1	100	99.127	ENSCHIG00000020203	PATZ1	100	99.127	Capra_hircus
ENSMLUG00000009942	PATZ1	100	98.981	ENSTSYG00000033183	PATZ1	100	98.981	Carlito_syrichta
ENSMLUG00000009942	PATZ1	100	99.064	ENSCCAG00000028772	PATZ1	100	99.064	Cebus_capucinus
ENSMLUG00000009942	PATZ1	100	99.064	ENSCATG00000006101	PATZ1	100	99.064	Cercocebus_atys
ENSMLUG00000009942	PATZ1	100	89.130	ENSCPBG00000011277	PATZ1	100	88.551	Chrysemys_picta_bellii
ENSMLUG00000009942	PATZ1	100	99.064	ENSCANG00000024972	PATZ1	100	99.064	Colobus_angolensis_palliatus
ENSMLUG00000009942	PATZ1	100	96.798	ENSCGRG00001004071	Patz1	100	96.798	Cricetulus_griseus_chok1gshd
ENSMLUG00000009942	PATZ1	93	97.512	ENSCGRG00000004814	Patz1	100	97.512	Cricetulus_griseus_crigri
ENSMLUG00000009942	PATZ1	100	55.168	ENSCSEG00000001385	patz1	100	55.201	Cynoglossus_semilaevis
ENSMLUG00000009942	PATZ1	100	58.997	ENSCVAG00000007684	patz1	100	58.789	Cyprinodon_variegatus
ENSMLUG00000009942	PATZ1	97	60.679	ENSDARG00000076584	patz1	98	59.119	Danio_rerio
ENSMLUG00000009942	PATZ1	90	99.031	ENSDNOG00000003183	PATZ1	100	99.031	Dasypus_novemcinctus
ENSMLUG00000009942	PATZ1	100	99.418	ENSDORG00000023834	Patz1	100	99.418	Dipodomys_ordii
ENSMLUG00000009942	PATZ1	100	99.272	ENSECAG00000025030	PATZ1	100	99.272	Equus_caballus
ENSMLUG00000009942	PATZ1	99	61.815	ENSELUG00000002333	patz1	100	60.208	Esox_lucius
ENSMLUG00000009942	PATZ1	100	99.709	ENSFCAG00000030253	PATZ1	100	99.709	Felis_catus
ENSMLUG00000009942	PATZ1	86	91.864	ENSFALG00000007450	PATZ1	99	90.971	Ficedula_albicollis
ENSMLUG00000009942	PATZ1	96	94.872	ENSFDAG00000005614	PATZ1	100	94.872	Fukomys_damarensis
ENSMLUG00000009942	PATZ1	100	57.625	ENSFHEG00000014755	patz1	100	57.625	Fundulus_heteroclitus
ENSMLUG00000009942	PATZ1	98	54.951	ENSGMOG00000001062	patz1	98	54.709	Gadus_morhua
ENSMLUG00000009942	PATZ1	100	88.633	ENSGALG00000006934	PATZ1	100	87.770	Gallus_gallus
ENSMLUG00000009942	PATZ1	100	58.721	ENSGAFG00000010053	patz1	100	57.856	Gambusia_affinis
ENSMLUG00000009942	PATZ1	85	91.938	ENSGAGG00000003214	PATZ1	100	90.909	Gopherus_agassizii
ENSMLUG00000009942	PATZ1	100	99.220	ENSGGOG00000017171	PATZ1	100	99.220	Gorilla_gorilla
ENSMLUG00000009942	PATZ1	98	62.846	ENSHCOG00000017644	patz1	93	58.136	Hippocampus_comes
ENSMLUG00000009942	PATZ1	97	60.285	ENSIPUG00000017653	patz1	97	60.041	Ictalurus_punctatus
ENSMLUG00000009942	PATZ1	100	99.376	ENSSTOG00000020707	PATZ1	100	99.376	Ictidomys_tridecemlineatus
ENSMLUG00000009942	PATZ1	100	96.662	ENSJJAG00000015259	Patz1	100	96.662	Jaculus_jaculus
ENSMLUG00000009942	PATZ1	100	57.528	ENSKMAG00000008157	patz1	100	57.627	Kryptolebias_marmoratus
ENSMLUG00000009942	PATZ1	100	98.690	ENSLAFG00000002317	PATZ1	100	98.690	Loxodonta_africana
ENSMLUG00000009942	PATZ1	100	98.908	ENSMFAG00000040968	PATZ1	100	98.908	Macaca_fascicularis
ENSMLUG00000009942	PATZ1	100	98.908	ENSMNEG00000037588	PATZ1	100	98.908	Macaca_nemestrina
ENSMLUG00000009942	PATZ1	100	99.064	ENSMLEG00000030938	PATZ1	100	99.064	Mandrillus_leucophaeus
ENSMLUG00000009942	PATZ1	100	57.478	ENSMAMG00000023652	patz1	100	57.771	Mastacembelus_armatus
ENSMLUG00000009942	PATZ1	85	88.034	ENSMGAG00000008439	PATZ1	100	87.009	Meleagris_gallopavo
ENSMLUG00000009942	PATZ1	100	98.596	ENSMAUG00000004129	Patz1	100	98.596	Mesocricetus_auratus
ENSMLUG00000009942	PATZ1	100	98.981	ENSMICG00000005430	PATZ1	100	98.981	Microcebus_murinus
ENSMLUG00000009942	PATZ1	100	98.440	ENSMOCG00000014488	Patz1	100	98.440	Microtus_ochrogaster
ENSMLUG00000009942	PATZ1	99	55.273	ENSMMOG00000021679	patz1	100	54.867	Mola_mola
ENSMLUG00000009942	PATZ1	100	57.143	ENSMALG00000021172	patz1	100	56.780	Monopterus_albus
ENSMLUG00000009942	PATZ1	100	98.440	MGP_CAROLIEiJ_G0016007	Patz1	100	98.440	Mus_caroli
ENSMLUG00000009942	PATZ1	100	98.596	ENSMUSG00000020453	Patz1	100	98.596	Mus_musculus
ENSMLUG00000009942	PATZ1	100	98.596	MGP_PahariEiJ_G0016884	Patz1	100	98.596	Mus_pahari
ENSMLUG00000009942	PATZ1	100	98.596	MGP_SPRETEiJ_G0016846	Patz1	100	98.596	Mus_spretus
ENSMLUG00000009942	PATZ1	100	98.908	ENSNGAG00000010268	Patz1	100	98.908	Nannospalax_galili
ENSMLUG00000009942	PATZ1	100	59.768	ENSNBRG00000016032	patz1	100	59.846	Neolamprologus_brichardi
ENSMLUG00000009942	PATZ1	68	93.978	ENSMEUG00000016293	PATZ1	99	93.966	Notamacropus_eugenii
ENSMLUG00000009942	PATZ1	100	98.544	ENSODEG00000003589	PATZ1	100	98.544	Octodon_degus
ENSMLUG00000009942	PATZ1	100	58.565	ENSONIG00000004248	patz1	100	58.626	Oreochromis_niloticus
ENSMLUG00000009942	PATZ1	100	93.324	ENSOANG00000014654	PATZ1	100	93.614	Ornithorhynchus_anatinus
ENSMLUG00000009942	PATZ1	100	58.626	ENSORLG00020010937	patz1	100	58.537	Oryzias_latipes_hni
ENSMLUG00000009942	PATZ1	100	58.003	ENSORLG00015007396	patz1	100	57.918	Oryzias_latipes_hsok
ENSMLUG00000009942	PATZ1	100	57.312	ENSOMEG00000006636	patz1	100	57.312	Oryzias_melastigma
ENSMLUG00000009942	PATZ1	100	99.127	ENSOGAG00000027905	PATZ1	100	99.127	Otolemur_garnettii
ENSMLUG00000009942	PATZ1	100	99.220	ENSPPAG00000033227	PATZ1	100	99.220	Pan_paniscus
ENSMLUG00000009942	PATZ1	100	99.709	ENSPPRG00000001573	PATZ1	100	99.709	Panthera_pardus
ENSMLUG00000009942	PATZ1	86	99.831	ENSPTIG00000007937	PATZ1	91	99.831	Panthera_tigris_altaica
ENSMLUG00000009942	PATZ1	100	99.220	ENSPTRG00000014268	PATZ1	100	99.220	Pan_troglodytes
ENSMLUG00000009942	PATZ1	100	99.064	ENSPANG00000006821	PATZ1	100	98.981	Papio_anubis
ENSMLUG00000009942	PATZ1	100	62.500	ENSPKIG00000019584	patz1	100	62.127	Paramormyrops_kingsleyae
ENSMLUG00000009942	PATZ1	60	83.535	ENSPSIG00000016553	-	91	82.809	Pelodiscus_sinensis
ENSMLUG00000009942	PATZ1	58	95.707	ENSPSIG00000011562	-	100	96.000	Pelodiscus_sinensis
ENSMLUG00000009942	PATZ1	100	56.882	ENSPMGG00000010196	patz1	100	56.942	Periophthalmus_magnuspinnatus
ENSMLUG00000009942	PATZ1	100	98.596	ENSPEMG00000005321	Patz1	100	98.596	Peromyscus_maniculatus_bairdii
ENSMLUG00000009942	PATZ1	100	57.478	ENSPLAG00000010425	patz1	100	57.625	Poecilia_latipinna
ENSMLUG00000009942	PATZ1	100	57.562	ENSPMEG00000000255	patz1	100	57.709	Poecilia_mexicana
ENSMLUG00000009942	PATZ1	100	56.906	ENSPREG00000002440	patz1	100	57.044	Poecilia_reticulata
ENSMLUG00000009942	PATZ1	100	98.836	ENSPPYG00000011732	PATZ1	100	98.836	Pongo_abelii
ENSMLUG00000009942	PATZ1	100	98.836	ENSPCOG00000019729	PATZ1	100	98.836	Propithecus_coquereli
ENSMLUG00000009942	PATZ1	100	99.563	ENSPVAG00000001749	PATZ1	100	99.563	Pteropus_vampyrus
ENSMLUG00000009942	PATZ1	100	59.187	ENSPNYG00000013542	patz1	100	59.244	Pundamilia_nyererei
ENSMLUG00000009942	PATZ1	84	60.292	ENSPNAG00000017222	patz1	99	58.599	Pygocentrus_nattereri
ENSMLUG00000009942	PATZ1	100	99.064	ENSRBIG00000044231	PATZ1	100	99.064	Rhinopithecus_bieti
ENSMLUG00000009942	PATZ1	100	99.064	ENSRROG00000037155	PATZ1	100	99.064	Rhinopithecus_roxellana
ENSMLUG00000009942	PATZ1	100	99.064	ENSSBOG00000003894	PATZ1	100	99.064	Saimiri_boliviensis_boliviensis
ENSMLUG00000009942	PATZ1	79	88.462	ENSSFOG00015013244	patz1	78	88.462	Scleropages_formosus
ENSMLUG00000009942	PATZ1	100	86.913	ENSSPUG00000015298	PATZ1	100	86.202	Sphenodon_punctatus
ENSMLUG00000009942	PATZ1	85	99.313	ENSSSCG00000010027	PATZ1	100	99.313	Sus_scrofa
ENSMLUG00000009942	PATZ1	100	58.069	ENSTRUG00000015366	patz1	100	59.612	Takifugu_rubripes
ENSMLUG00000009942	PATZ1	100	99.563	ENSTTRG00000010279	PATZ1	100	99.563	Tursiops_truncatus
ENSMLUG00000009942	PATZ1	100	99.688	ENSUAMG00000015014	PATZ1	100	99.688	Ursus_americanus
ENSMLUG00000009942	PATZ1	100	73.333	ENSXETG00000004190	patz1	100	73.043	Xenopus_tropicalis
ENSMLUG00000009942	PATZ1	100	57.856	ENSXMAG00000015531	patz1	100	58.003	Xiphophorus_maculatus