EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000010200 (Gene tree)
Gene ID: 102420349
Gene Symbol: HFM1
Alias: FLJ36760|FLJ39011|MER3|SEC63D1
Full Name: HFM1%2C ATP dependent DNA helicase homolog
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 93103 bases
Position: chrGL429877:2000274-2093376
Accession: 20193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000009314	ResIII	PF04851.15	1e-11	1	1
ENSMLUP00000009314	DEAD	PF00270.29	1.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000010219	HFM1-201	4323	XM_006093207	ENSMLUP00000009314	1440 (aa)	-	G1PFG6

Gene Model

Click here to download ENSMLUG00000010200's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000010200's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000010200	HFM1	51	33.982	ENSMLUG00000002886	ASCC3	61	33.982
ENSMLUG00000010200	HFM1	55	31.547	ENSMLUG00000027511	-	67	31.547
ENSMLUG00000010200	HFM1	58	31.873	ENSMLUG00000010493	SNRNP200	75	31.873

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000010200	HFM1	100	83.761	ENSG00000162669	HFM1	100	83.761	Homo_sapiens
ENSMLUG00000010200	HFM1	58	65.789	ENSAPOG00000005304	hfm1	94	65.789	Acanthochromis_polyacanthus
ENSMLUG00000010200	HFM1	100	85.160	ENSAMEG00000000432	HFM1	100	85.160	Ailuropoda_melanoleuca
ENSMLUG00000010200	HFM1	71	59.632	ENSACIG00000021553	hfm1	92	59.632	Amphilophus_citrinellus
ENSMLUG00000010200	HFM1	58	66.187	ENSAOCG00000022839	hfm1	96	68.474	Amphiprion_ocellaris
ENSMLUG00000010200	HFM1	58	65.947	ENSAPEG00000014316	hfm1	96	68.647	Amphiprion_percula
ENSMLUG00000010200	HFM1	70	61.419	ENSATEG00000019181	hfm1	84	60.451	Anabas_testudineus
ENSMLUG00000010200	HFM1	100	59.401	ENSAPLG00000013639	HFM1	100	59.401	Anas_platyrhynchos
ENSMLUG00000010200	HFM1	100	80.665	ENSANAG00000029513	HFM1	100	80.665	Aotus_nancymaae
ENSMLUG00000010200	HFM1	64	63.305	ENSACLG00000009033	hfm1	97	64.345	Astatotilapia_calliptera
ENSMLUG00000010200	HFM1	85	56.000	ENSAMXG00000006108	hfm1	83	55.468	Astyanax_mexicanus
ENSMLUG00000010200	HFM1	100	83.564	ENSBTAG00000020856	HFM1	100	83.564	Bos_taurus
ENSMLUG00000010200	HFM1	100	82.165	ENSCJAG00000001843	HFM1	100	82.165	Callithrix_jacchus
ENSMLUG00000010200	HFM1	100	84.913	ENSCAFG00000020187	HFM1	100	84.913	Canis_familiaris
ENSMLUG00000010200	HFM1	100	82.064	ENSTSYG00000014250	HFM1	100	82.064	Carlito_syrichta
ENSMLUG00000010200	HFM1	99	76.540	ENSCPOG00000007421	HFM1	99	76.540	Cavia_porcellus
ENSMLUG00000010200	HFM1	100	81.818	ENSCCAG00000033206	HFM1	100	81.818	Cebus_capucinus
ENSMLUG00000010200	HFM1	100	82.998	ENSCATG00000030987	HFM1	100	82.998	Cercocebus_atys
ENSMLUG00000010200	HFM1	100	78.167	ENSCLAG00000005173	HFM1	99	78.167	Chinchilla_lanigera
ENSMLUG00000010200	HFM1	63	90.789	ENSCHOG00000011824	-	71	90.789	Choloepus_hoffmanni
ENSMLUG00000010200	HFM1	100	70.503	ENSCGRG00001016995	Hfm1	100	70.503	Cricetulus_griseus_chok1gshd
ENSMLUG00000010200	HFM1	100	74.567	ENSCGRG00000017181	Hfm1	100	74.567	Cricetulus_griseus_crigri
ENSMLUG00000010200	HFM1	71	59.238	ENSCSEG00000017659	hfm1	94	59.013	Cynoglossus_semilaevis
ENSMLUG00000010200	HFM1	79	54.593	ENSDARG00000104288	hfm1	99	54.593	Danio_rerio
ENSMLUG00000010200	HFM1	100	79.111	ENSDNOG00000004776	HFM1	100	79.111	Dasypus_novemcinctus
ENSMLUG00000010200	HFM1	100	75.683	ENSDORG00000014661	Hfm1	100	75.683	Dipodomys_ordii
ENSMLUG00000010200	HFM1	70	86.785	ENSEASG00005015424	HFM1	97	86.785	Equus_asinus_asinus
ENSMLUG00000010200	HFM1	100	84.175	ENSECAG00000024039	HFM1	100	84.175	Equus_caballus
ENSMLUG00000010200	HFM1	63	66.484	ENSELUG00000018944	hfm1	97	66.484	Esox_lucius
ENSMLUG00000010200	HFM1	100	84.397	ENSFCAG00000029116	HFM1	100	84.397	Felis_catus
ENSMLUG00000010200	HFM1	100	59.945	ENSFALG00000001781	HFM1	100	60.496	Ficedula_albicollis
ENSMLUG00000010200	HFM1	100	77.315	ENSFDAG00000020816	HFM1	100	77.315	Fukomys_damarensis
ENSMLUG00000010200	HFM1	66	59.834	ENSGMOG00000017436	hfm1	100	59.834	Gadus_morhua
ENSMLUG00000010200	HFM1	71	61.010	ENSGAFG00000018093	hfm1	92	67.801	Gambusia_affinis
ENSMLUG00000010200	HFM1	66	61.277	ENSGACG00000015686	hfm1	100	61.277	Gasterosteus_aculeatus
ENSMLUG00000010200	HFM1	100	83.622	ENSGGOG00000038524	HFM1	100	83.622	Gorilla_gorilla
ENSMLUG00000010200	HFM1	64	64.485	ENSHBUG00000007309	hfm1	95	60.348	Haplochromis_burtoni
ENSMLUG00000010200	HFM1	56	64.461	ENSHCOG00000019632	hfm1	97	64.461	Hippocampus_comes
ENSMLUG00000010200	HFM1	70	62.008	ENSIPUG00000017020	hfm1	92	65.871	Ictalurus_punctatus
ENSMLUG00000010200	HFM1	100	76.197	ENSJJAG00000017198	Hfm1	100	76.197	Jaculus_jaculus
ENSMLUG00000010200	HFM1	62	62.639	ENSKMAG00000002282	hfm1	91	62.639	Kryptolebias_marmoratus
ENSMLUG00000010200	HFM1	71	59.459	ENSLBEG00000006759	hfm1	96	65.472	Labrus_bergylta
ENSMLUG00000010200	HFM1	66	71.458	ENSLACG00000010698	HFM1	100	67.705	Latimeria_chalumnae
ENSMLUG00000010200	HFM1	74	63.060	ENSLOCG00000004931	hfm1	99	63.153	Lepisosteus_oculatus
ENSMLUG00000010200	HFM1	52	89.637	ENSLAFG00000015903	-	99	89.637	Loxodonta_africana
ENSMLUG00000010200	HFM1	100	79.889	ENSMFAG00000003649	HFM1	100	79.889	Macaca_fascicularis
ENSMLUG00000010200	HFM1	100	82.929	ENSMMUG00000006819	HFM1	100	82.929	Macaca_mulatta
ENSMLUG00000010200	HFM1	54	69.063	ENSMAMG00000004623	hfm1	97	65.700	Mastacembelus_armatus
ENSMLUG00000010200	HFM1	64	63.305	ENSMZEG00005004679	hfm1	97	64.345	Maylandia_zebra
ENSMLUG00000010200	HFM1	54	77.907	ENSMGAG00000008437	HFM1	96	77.907	Meleagris_gallopavo
ENSMLUG00000010200	HFM1	100	74.688	ENSMAUG00000018858	Hfm1	100	74.688	Mesocricetus_auratus
ENSMLUG00000010200	HFM1	100	83.576	ENSMICG00000037935	HFM1	100	83.576	Microcebus_murinus
ENSMLUG00000010200	HFM1	100	73.509	ENSMOCG00000014812	Hfm1	100	73.509	Microtus_ochrogaster
ENSMLUG00000010200	HFM1	62	63.789	ENSMMOG00000006148	hfm1	96	64.617	Mola_mola
ENSMLUG00000010200	HFM1	65	63.383	ENSMALG00000002401	hfm1	94	66.065	Monopterus_albus
ENSMLUG00000010200	HFM1	95	69.625	MGP_CAROLIEiJ_G0027496	Hfm1	100	69.625	Mus_caroli
ENSMLUG00000010200	HFM1	100	74.202	ENSMUSG00000043410	Hfm1	100	74.202	Mus_musculus
ENSMLUG00000010200	HFM1	100	73.786	MGP_PahariEiJ_G0017268	Hfm1	100	73.786	Mus_pahari
ENSMLUG00000010200	HFM1	100	73.786	MGP_SPRETEiJ_G0028495	Hfm1	100	73.786	Mus_spretus
ENSMLUG00000010200	HFM1	100	82.626	ENSMPUG00000004594	HFM1	100	82.626	Mustela_putorius_furo
ENSMLUG00000010200	HFM1	64	60.236	ENSNBRG00000002910	hfm1	97	64.970	Neolamprologus_brichardi
ENSMLUG00000010200	HFM1	100	80.069	ENSNLEG00000010285	HFM1	100	80.069	Nomascus_leucogenys
ENSMLUG00000010200	HFM1	84	65.230	ENSMEUG00000015788	HFM1	84	65.230	Notamacropus_eugenii
ENSMLUG00000010200	HFM1	84	76.112	ENSOPRG00000013916	HFM1	84	76.112	Ochotona_princeps
ENSMLUG00000010200	HFM1	71	60.690	ENSONIG00000010590	hfm1	99	60.664	Oreochromis_niloticus
ENSMLUG00000010200	HFM1	56	64.699	ENSORLG00000026844	hfm1	99	64.699	Oryzias_latipes
ENSMLUG00000010200	HFM1	84	47.770	ENSORLG00020002951	hfm1	96	47.854	Oryzias_latipes_hni
ENSMLUG00000010200	HFM1	88	50.901	ENSOMEG00000016474	hfm1	90	50.826	Oryzias_melastigma
ENSMLUG00000010200	HFM1	85	86.319	ENSOGAG00000032369	HFM1	99	86.319	Otolemur_garnettii
ENSMLUG00000010200	HFM1	100	83.864	ENSOARG00000015812	HFM1	100	83.864	Ovis_aries
ENSMLUG00000010200	HFM1	92	85.628	ENSPPAG00000024582	HFM1	100	85.628	Pan_paniscus
ENSMLUG00000010200	HFM1	100	84.605	ENSPPRG00000003270	HFM1	100	84.605	Panthera_pardus
ENSMLUG00000010200	HFM1	100	84.397	ENSPTIG00000018881	HFM1	100	84.397	Panthera_tigris_altaica
ENSMLUG00000010200	HFM1	100	83.969	ENSPTRG00000000948	HFM1	100	83.969	Pan_troglodytes
ENSMLUG00000010200	HFM1	100	82.929	ENSPANG00000009838	HFM1	100	82.929	Papio_anubis
ENSMLUG00000010200	HFM1	63	66.593	ENSPKIG00000003810	hfm1	95	67.633	Paramormyrops_kingsleyae
ENSMLUG00000010200	HFM1	57	65.296	ENSPMGG00000011059	hfm1	100	65.296	Periophthalmus_magnuspinnatus
ENSMLUG00000010200	HFM1	100	76.283	ENSPEMG00000022852	Hfm1	100	76.283	Peromyscus_maniculatus_bairdii
ENSMLUG00000010200	HFM1	100	67.157	ENSPCIG00000014233	HFM1	100	67.157	Phascolarctos_cinereus
ENSMLUG00000010200	HFM1	71	61.873	ENSPFOG00000017194	hfm1	100	62.193	Poecilia_formosa
ENSMLUG00000010200	HFM1	71	63.218	ENSPLAG00000000571	hfm1	92	63.218	Poecilia_latipinna
ENSMLUG00000010200	HFM1	71	62.286	ENSPMEG00000019475	hfm1	93	62.286	Poecilia_mexicana
ENSMLUG00000010200	HFM1	71	62.963	ENSPREG00000007803	hfm1	92	67.275	Poecilia_reticulata
ENSMLUG00000010200	HFM1	100	83.622	ENSPPYG00000001163	HFM1	100	83.622	Pongo_abelii
ENSMLUG00000010200	HFM1	74	82.063	ENSPCAG00000004289	-	74	82.063	Procavia_capensis
ENSMLUG00000010200	HFM1	100	77.285	ENSPVAG00000009713	HFM1	100	77.285	Pteropus_vampyrus
ENSMLUG00000010200	HFM1	64	63.197	ENSPNYG00000001795	hfm1	97	64.345	Pundamilia_nyererei
ENSMLUG00000010200	HFM1	59	67.612	ENSPNAG00000010865	hfm1	84	67.612	Pygocentrus_nattereri
ENSMLUG00000010200	HFM1	100	73.218	ENSRNOG00000023299	Hfm1	100	73.218	Rattus_norvegicus
ENSMLUG00000010200	HFM1	100	82.859	ENSRROG00000045569	HFM1	100	82.859	Rhinopithecus_roxellana
ENSMLUG00000010200	HFM1	100	80.556	ENSSBOG00000027456	HFM1	100	80.556	Saimiri_boliviensis_boliviensis
ENSMLUG00000010200	HFM1	60	71.824	ENSSHAG00000014616	-	98	71.824	Sarcophilus_harrisii
ENSMLUG00000010200	HFM1	85	56.463	ENSSFOG00015020129	hfm1	82	56.463	Scleropages_formosus
ENSMLUG00000010200	HFM1	62	65.513	ENSSMAG00000006907	hfm1	87	65.513	Scophthalmus_maximus
ENSMLUG00000010200	HFM1	57	66.022	ENSSDUG00000011424	hfm1	93	66.022	Seriola_dumerili
ENSMLUG00000010200	HFM1	58	66.145	ENSSLDG00000016386	hfm1	92	66.145	Seriola_lalandi_dorsalis
ENSMLUG00000010200	HFM1	65	60.485	ENSSPAG00000001023	hfm1	94	66.427	Stegastes_partitus
ENSMLUG00000010200	HFM1	100	80.997	ENSSSCG00000006912	HFM1	98	83.084	Sus_scrofa
ENSMLUG00000010200	HFM1	66	75.758	ENSTGUG00000006172	HFM1	100	75.758	Taeniopygia_guttata
ENSMLUG00000010200	HFM1	100	80.652	ENSTTRG00000013933	HFM1	100	80.652	Tursiops_truncatus
ENSMLUG00000010200	HFM1	93	83.868	ENSVPAG00000011331	HFM1	93	83.868	Vicugna_pacos
ENSMLUG00000010200	HFM1	70	84.124	ENSVVUG00000020760	HFM1	99	84.124	Vulpes_vulpes
ENSMLUG00000010200	HFM1	58	67.025	ENSXMAG00000004178	hfm1	93	67.025	Xiphophorus_maculatus