EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000010493 (Gene tree)
Gene ID: 102434030
Gene Symbol: SNRNP200
Alias: -
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 40156 bases
Position: chrGL430197:601183-641338
Accession: 102434030
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000009617	ResIII	PF04851.15	2.2e-26	1	2
ENSMLUP00000009617	ResIII	PF04851.15	2.2e-26	2	2
ENSMLUP00000009617	DEAD	PF00270.29	2.5e-51	1	2
ENSMLUP00000009617	DEAD	PF00270.29	2.5e-51	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000010552	SNRNP200-201	6420	XM_006102812	ENSMLUP00000009617	2139 (aa)	XP_006102874	G1PG71

Gene Model

Click here to download ENSMLUG00000010493's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000010493's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000010493	SNRNP200	100	95.886	ENSMLUG00000027511	-	100	95.886
ENSMLUG00000010493	SNRNP200	86	41.876	ENSMLUG00000002886	ASCC3	80	43.996
ENSMLUG00000010493	SNRNP200	75	31.873	ENSMLUG00000010200	HFM1	58	31.873

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000010493	SNRNP200	100	99.252	ENSG00000144028	SNRNP200	100	99.252	Homo_sapiens
ENSMLUG00000010493	SNRNP200	99	90.572	ENSAPOG00000010223	snrnp200	99	90.463	Acanthochromis_polyacanthus
ENSMLUG00000010493	SNRNP200	100	99.205	ENSAMEG00000008996	SNRNP200	100	99.205	Ailuropoda_melanoleuca
ENSMLUG00000010493	SNRNP200	97	89.792	ENSACIG00000001764	snrnp200	98	89.792	Amphilophus_citrinellus
ENSMLUG00000010493	SNRNP200	99	90.525	ENSAOCG00000024593	snrnp200	100	89.578	Amphiprion_ocellaris
ENSMLUG00000010493	SNRNP200	97	89.524	ENSAPEG00000012554	snrnp200	100	89.524	Amphiprion_percula
ENSMLUG00000010493	SNRNP200	99	90.385	ENSATEG00000022522	snrnp200	99	90.276	Anabas_testudineus
ENSMLUG00000010493	SNRNP200	99	97.175	ENSAPLG00000004313	SNRNP200	100	97.175	Anas_platyrhynchos
ENSMLUG00000010493	SNRNP200	99	97.037	ENSACAG00000000434	SNRNP200	100	97.037	Anolis_carolinensis
ENSMLUG00000010493	SNRNP200	100	94.737	ENSANAG00000036625	SNRNP200	100	94.737	Aotus_nancymaae
ENSMLUG00000010493	SNRNP200	99	90.103	ENSACLG00000011188	snrnp200	99	89.995	Astatotilapia_calliptera
ENSMLUG00000010493	SNRNP200	99	90.385	ENSAMXG00000005684	snrnp200	99	90.276	Astyanax_mexicanus
ENSMLUG00000010493	SNRNP200	100	98.784	ENSBTAG00000000848	SNRNP200	100	98.784	Bos_taurus
ENSMLUG00000010493	SNRNP200	100	99.252	ENSCJAG00000007514	SNRNP200	100	99.252	Callithrix_jacchus
ENSMLUG00000010493	SNRNP200	100	98.416	ENSCAFG00020019979	SNRNP200	100	99.184	Canis_lupus_dingo
ENSMLUG00000010493	SNRNP200	100	98.971	ENSCHIG00000020611	SNRNP200	100	98.971	Capra_hircus
ENSMLUG00000010493	SNRNP200	100	99.205	ENSTSYG00000010467	SNRNP200	100	99.205	Carlito_syrichta
ENSMLUG00000010493	SNRNP200	99	98.685	ENSCAPG00000017234	SNRNP200	99	98.685	Cavia_aperea
ENSMLUG00000010493	SNRNP200	100	98.971	ENSCPOG00000006776	SNRNP200	100	98.971	Cavia_porcellus
ENSMLUG00000010493	SNRNP200	100	99.252	ENSCCAG00000033962	SNRNP200	100	99.252	Cebus_capucinus
ENSMLUG00000010493	SNRNP200	100	99.252	ENSCATG00000015790	SNRNP200	100	99.252	Cercocebus_atys
ENSMLUG00000010493	SNRNP200	100	98.925	ENSCLAG00000004116	SNRNP200	100	98.925	Chinchilla_lanigera
ENSMLUG00000010493	SNRNP200	100	99.205	ENSCSAG00000017369	SNRNP200	100	99.205	Chlorocebus_sabaeus
ENSMLUG00000010493	SNRNP200	75	99.213	ENSCHOG00000012981	-	59	99.213	Choloepus_hoffmanni
ENSMLUG00000010493	SNRNP200	100	97.246	ENSCPBG00000022571	SNRNP200	100	97.246	Chrysemys_picta_bellii
ENSMLUG00000010493	SNRNP200	99	76.306	ENSCING00000005082	-	99	76.446	Ciona_intestinalis
ENSMLUG00000010493	SNRNP200	100	93.750	ENSCANG00000033932	SNRNP200	100	99.254	Colobus_angolensis_palliatus
ENSMLUG00000010493	SNRNP200	100	99.018	ENSCGRG00001022610	Snrnp200	100	99.018	Cricetulus_griseus_chok1gshd
ENSMLUG00000010493	SNRNP200	100	98.459	ENSCGRG00000016472	Snrnp200	100	98.459	Cricetulus_griseus_crigri
ENSMLUG00000010493	SNRNP200	100	89.528	ENSCSEG00000016399	snrnp200	100	89.528	Cynoglossus_semilaevis
ENSMLUG00000010493	SNRNP200	100	85.227	ENSCVAG00000017631	snrnp200	99	85.227	Cyprinodon_variegatus
ENSMLUG00000010493	SNRNP200	100	89.902	ENSDARG00000077536	snrnp200	99	89.902	Danio_rerio
ENSMLUG00000010493	SNRNP200	100	97.896	ENSDNOG00000011227	SNRNP200	100	97.896	Dasypus_novemcinctus
ENSMLUG00000010493	SNRNP200	100	96.500	ENSDORG00000005861	Snrnp200	100	96.500	Dipodomys_ordii
ENSMLUG00000010493	SNRNP200	100	74.198	FBgn0263599	l(3)72Ab	99	74.105	Drosophila_melanogaster
ENSMLUG00000010493	SNRNP200	95	99.227	ENSETEG00000000162	SNRNP200	74	99.227	Echinops_telfairi
ENSMLUG00000010493	SNRNP200	83	81.183	ENSEBUG00000016524	snrnp200	95	81.183	Eptatretus_burgeri
ENSMLUG00000010493	SNRNP200	100	98.091	ENSEASG00005001884	SNRNP200	100	98.091	Equus_asinus_asinus
ENSMLUG00000010493	SNRNP200	100	99.205	ENSECAG00000019675	SNRNP200	100	99.205	Equus_caballus
ENSMLUG00000010493	SNRNP200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSMLUG00000010493	SNRNP200	99	90.478	ENSELUG00000018948	snrnp200	99	90.369	Esox_lucius
ENSMLUG00000010493	SNRNP200	100	99.252	ENSFCAG00000010699	SNRNP200	100	99.252	Felis_catus
ENSMLUG00000010493	SNRNP200	94	91.228	ENSFALG00000001368	-	95	91.228	Ficedula_albicollis
ENSMLUG00000010493	SNRNP200	100	98.971	ENSFDAG00000004683	SNRNP200	100	98.971	Fukomys_damarensis
ENSMLUG00000010493	SNRNP200	100	87.518	ENSFHEG00000003786	snrnp200	99	87.518	Fundulus_heteroclitus
ENSMLUG00000010493	SNRNP200	100	89.314	ENSGMOG00000004881	snrnp200	99	89.267	Gadus_morhua
ENSMLUG00000010493	SNRNP200	100	87.751	ENSGAFG00000010807	snrnp200	99	87.751	Gambusia_affinis
ENSMLUG00000010493	SNRNP200	100	89.599	ENSGACG00000011474	snrnp200	99	89.506	Gasterosteus_aculeatus
ENSMLUG00000010493	SNRNP200	95	97.225	ENSGAGG00000016069	SNRNP200	99	97.225	Gopherus_agassizii
ENSMLUG00000010493	SNRNP200	100	99.252	ENSGGOG00000005174	SNRNP200	100	99.252	Gorilla_gorilla
ENSMLUG00000010493	SNRNP200	97	87.267	ENSHBUG00000011322	snrnp200	99	87.313	Haplochromis_burtoni
ENSMLUG00000010493	SNRNP200	100	99.065	ENSHGLG00000006654	SNRNP200	100	99.065	Heterocephalus_glaber_female
ENSMLUG00000010493	SNRNP200	100	99.065	ENSHGLG00100018594	SNRNP200	100	99.065	Heterocephalus_glaber_male
ENSMLUG00000010493	SNRNP200	100	99.205	ENSSTOG00000016351	SNRNP200	100	99.205	Ictidomys_tridecemlineatus
ENSMLUG00000010493	SNRNP200	100	98.925	ENSJJAG00000023659	Snrnp200	100	98.925	Jaculus_jaculus
ENSMLUG00000010493	SNRNP200	100	87.232	ENSKMAG00000003665	snrnp200	99	87.232	Kryptolebias_marmoratus
ENSMLUG00000010493	SNRNP200	100	89.902	ENSLBEG00000021585	snrnp200	99	89.902	Labrus_bergylta
ENSMLUG00000010493	SNRNP200	82	94.266	ENSLACG00000000226	SNRNP200	99	94.266	Latimeria_chalumnae
ENSMLUG00000010493	SNRNP200	100	92.146	ENSLOCG00000015198	snrnp200	99	92.146	Lepisosteus_oculatus
ENSMLUG00000010493	SNRNP200	100	98.925	ENSLAFG00000015626	SNRNP200	100	98.925	Loxodonta_africana
ENSMLUG00000010493	SNRNP200	100	99.205	ENSMFAG00000040174	SNRNP200	100	99.205	Macaca_fascicularis
ENSMLUG00000010493	SNRNP200	100	99.205	ENSMMUG00000023261	SNRNP200	100	99.205	Macaca_mulatta
ENSMLUG00000010493	SNRNP200	100	99.158	ENSMNEG00000032398	SNRNP200	100	99.158	Macaca_nemestrina
ENSMLUG00000010493	SNRNP200	100	99.252	ENSMLEG00000019083	SNRNP200	100	99.252	Mandrillus_leucophaeus
ENSMLUG00000010493	SNRNP200	100	89.766	ENSMAMG00000007851	snrnp200	99	89.720	Mastacembelus_armatus
ENSMLUG00000010493	SNRNP200	97	87.267	ENSMZEG00005010787	snrnp200	99	87.313	Maylandia_zebra
ENSMLUG00000010493	SNRNP200	97	96.763	ENSMGAG00000001831	SNRNP200	100	96.763	Meleagris_gallopavo
ENSMLUG00000010493	SNRNP200	100	99.065	ENSMAUG00000011825	Snrnp200	100	99.065	Mesocricetus_auratus
ENSMLUG00000010493	SNRNP200	100	99.112	ENSMICG00000004710	SNRNP200	100	99.112	Microcebus_murinus
ENSMLUG00000010493	SNRNP200	100	96.494	ENSMOCG00000011814	Snrnp200	100	96.494	Microtus_ochrogaster
ENSMLUG00000010493	SNRNP200	99	88.696	ENSMMOG00000014167	snrnp200	99	88.593	Mola_mola
ENSMLUG00000010493	SNRNP200	100	98.410	ENSMODG00000008475	SNRNP200	100	98.410	Monodelphis_domestica
ENSMLUG00000010493	SNRNP200	99	90.432	ENSMALG00000001973	snrnp200	99	90.323	Monopterus_albus
ENSMLUG00000010493	SNRNP200	100	98.878	MGP_CAROLIEiJ_G0024250	Snrnp200	100	98.878	Mus_caroli
ENSMLUG00000010493	SNRNP200	100	98.925	ENSMUSG00000003660	Snrnp200	100	98.925	Mus_musculus
ENSMLUG00000010493	SNRNP200	100	98.971	MGP_PahariEiJ_G0025695	Snrnp200	100	98.971	Mus_pahari
ENSMLUG00000010493	SNRNP200	100	98.925	MGP_SPRETEiJ_G0025170	Snrnp200	100	98.925	Mus_spretus
ENSMLUG00000010493	SNRNP200	100	99.158	ENSMPUG00000008949	SNRNP200	100	99.158	Mustela_putorius_furo
ENSMLUG00000010493	SNRNP200	100	99.158	ENSNGAG00000021993	Snrnp200	100	99.158	Nannospalax_galili
ENSMLUG00000010493	SNRNP200	90	89.861	ENSNBRG00000017960	snrnp200	98	89.861	Neolamprologus_brichardi
ENSMLUG00000010493	SNRNP200	100	94.615	ENSNLEG00000000025	SNRNP200	100	94.705	Nomascus_leucogenys
ENSMLUG00000010493	SNRNP200	100	98.611	ENSMEUG00000010532	SNRNP200	79	98.611	Notamacropus_eugenii
ENSMLUG00000010493	SNRNP200	100	95.231	ENSOPRG00000015464	SNRNP200	100	95.231	Ochotona_princeps
ENSMLUG00000010493	SNRNP200	100	99.018	ENSODEG00000008366	SNRNP200	100	99.018	Octodon_degus
ENSMLUG00000010493	SNRNP200	99	90.056	ENSONIG00000010714	snrnp200	99	89.949	Oreochromis_niloticus
ENSMLUG00000010493	SNRNP200	100	99.112	ENSOCUG00000009864	SNRNP200	100	99.112	Oryctolagus_cuniculus
ENSMLUG00000010493	SNRNP200	100	89.902	ENSORLG00000012286	snrnp200	100	89.902	Oryzias_latipes
ENSMLUG00000010493	SNRNP200	100	89.949	ENSORLG00020004648	snrnp200	100	89.949	Oryzias_latipes_hni
ENSMLUG00000010493	SNRNP200	100	89.902	ENSORLG00015019114	snrnp200	100	89.985	Oryzias_latipes_hsok
ENSMLUG00000010493	SNRNP200	99	90.150	ENSOMEG00000011834	snrnp200	99	90.042	Oryzias_melastigma
ENSMLUG00000010493	SNRNP200	100	99.205	ENSOGAG00000006879	SNRNP200	100	99.205	Otolemur_garnettii
ENSMLUG00000010493	SNRNP200	100	97.944	ENSOARG00000013949	SNRNP200	100	97.944	Ovis_aries
ENSMLUG00000010493	SNRNP200	100	99.252	ENSPPAG00000041559	SNRNP200	100	99.252	Pan_paniscus
ENSMLUG00000010493	SNRNP200	100	99.252	ENSPPRG00000004435	SNRNP200	100	99.252	Panthera_pardus
ENSMLUG00000010493	SNRNP200	100	98.831	ENSPTIG00000006380	SNRNP200	100	98.831	Panthera_tigris_altaica
ENSMLUG00000010493	SNRNP200	100	99.252	ENSPTRG00000012230	SNRNP200	100	99.252	Pan_troglodytes
ENSMLUG00000010493	SNRNP200	100	99.299	ENSPANG00000006017	SNRNP200	100	99.299	Papio_anubis
ENSMLUG00000010493	SNRNP200	100	90.743	ENSPKIG00000014762	snrnp200	99	90.743	Paramormyrops_kingsleyae
ENSMLUG00000010493	SNRNP200	100	96.447	ENSPSIG00000008580	SNRNP200	100	96.447	Pelodiscus_sinensis
ENSMLUG00000010493	SNRNP200	100	98.551	ENSPCIG00000023050	SNRNP200	100	98.551	Phascolarctos_cinereus
ENSMLUG00000010493	SNRNP200	100	90.000	ENSPFOG00000015110	snrnp200	99	90.000	Poecilia_formosa
ENSMLUG00000010493	SNRNP200	97	89.632	ENSPLAG00000006711	snrnp200	99	89.632	Poecilia_latipinna
ENSMLUG00000010493	SNRNP200	97	89.578	ENSPMEG00000021166	snrnp200	99	89.578	Poecilia_mexicana
ENSMLUG00000010493	SNRNP200	100	90.089	ENSPREG00000008875	snrnp200	99	90.089	Poecilia_reticulata
ENSMLUG00000010493	SNRNP200	100	99.252	ENSPPYG00000012068	SNRNP200	100	99.252	Pongo_abelii
ENSMLUG00000010493	SNRNP200	92	100.000	ENSPCAG00000008536	SNRNP200	83	100.000	Procavia_capensis
ENSMLUG00000010493	SNRNP200	100	99.158	ENSPCOG00000024608	SNRNP200	100	99.158	Propithecus_coquereli
ENSMLUG00000010493	SNRNP200	96	99.324	ENSPVAG00000005860	SNRNP200	93	99.324	Pteropus_vampyrus
ENSMLUG00000010493	SNRNP200	99	85.734	ENSPNYG00000017476	snrnp200	99	85.641	Pundamilia_nyererei
ENSMLUG00000010493	SNRNP200	100	85.788	ENSPNAG00000010998	snrnp200	99	85.788	Pygocentrus_nattereri
ENSMLUG00000010493	SNRNP200	100	99.065	ENSRNOG00000012157	Snrnp200	100	99.065	Rattus_norvegicus
ENSMLUG00000010493	SNRNP200	100	99.252	ENSRBIG00000044690	-	100	99.252	Rhinopithecus_bieti
ENSMLUG00000010493	SNRNP200	100	99.252	ENSRROG00000037952	-	100	99.252	Rhinopithecus_roxellana
ENSMLUG00000010493	SNRNP200	100	99.252	ENSSBOG00000035471	SNRNP200	100	99.252	Saimiri_boliviensis_boliviensis
ENSMLUG00000010493	SNRNP200	97	98.454	ENSSHAG00000000758	SNRNP200	100	98.454	Sarcophilus_harrisii
ENSMLUG00000010493	SNRNP200	99	91.135	ENSSFOG00015018826	snrnp200	99	91.024	Scleropages_formosus
ENSMLUG00000010493	SNRNP200	99	90.103	ENSSMAG00000005463	snrnp200	99	89.995	Scophthalmus_maximus
ENSMLUG00000010493	SNRNP200	99	90.478	ENSSDUG00000021410	snrnp200	99	90.369	Seriola_dumerili
ENSMLUG00000010493	SNRNP200	99	90.338	ENSSLDG00000010884	snrnp200	99	90.229	Seriola_lalandi_dorsalis
ENSMLUG00000010493	SNRNP200	95	98.667	ENSSARG00000010728	SNRNP200	96	98.667	Sorex_araneus
ENSMLUG00000010493	SNRNP200	100	96.961	ENSSPUG00000003726	-	100	96.961	Sphenodon_punctatus
ENSMLUG00000010493	SNRNP200	99	90.432	ENSSPAG00000001842	snrnp200	99	90.323	Stegastes_partitus
ENSMLUG00000010493	SNRNP200	100	99.065	ENSSSCG00000008127	SNRNP200	100	99.065	Sus_scrofa
ENSMLUG00000010493	SNRNP200	99	87.385	ENSTGUG00000014475	-	100	87.385	Taeniopygia_guttata
ENSMLUG00000010493	SNRNP200	99	89.962	ENSTRUG00000001307	snrnp200	99	89.855	Takifugu_rubripes
ENSMLUG00000010493	SNRNP200	100	85.485	ENSTNIG00000004320	snrnp200	100	85.485	Tetraodon_nigroviridis
ENSMLUG00000010493	SNRNP200	83	100.000	ENSTBEG00000003329	-	67	100.000	Tupaia_belangeri
ENSMLUG00000010493	SNRNP200	100	98.878	ENSTTRG00000004983	SNRNP200	100	98.878	Tursiops_truncatus
ENSMLUG00000010493	SNRNP200	75	92.367	ENSUAMG00000008395	-	95	92.367	Ursus_americanus
ENSMLUG00000010493	SNRNP200	100	99.252	ENSUMAG00000012385	SNRNP200	100	99.252	Ursus_maritimus
ENSMLUG00000010493	SNRNP200	90	100.000	ENSVPAG00000006434	SNRNP200	69	100.000	Vicugna_pacos
ENSMLUG00000010493	SNRNP200	100	99.021	ENSVVUG00000026247	SNRNP200	100	99.021	Vulpes_vulpes
ENSMLUG00000010493	SNRNP200	100	94.024	ENSXETG00000001243	snrnp200	100	94.024	Xenopus_tropicalis
ENSMLUG00000010493	SNRNP200	97	89.898	ENSXMAG00000002058	snrnp200	98	89.898	Xiphophorus_maculatus