EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMLUG00000010789 (Gene tree)
Gene ID: 102428613
Gene Symbol: SF3B4
Alias: Hsh49|SAP49|SF3b49
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Minus strand
Length: 5197 bases
Position: chrGL429918:1141098-1146294
Accession: 102428613
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000009824	RRM_1	PF00076.22	2.2e-39	1	2
ENSMLUP00000009824	RRM_1	PF00076.22	2.2e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000010777	SF3B4-201	1422	XM_006095177	ENSMLUP00000009824	424 (aa)	XP_006095239	G1PGP9

Gene Model

Click here to download ENSMLUG00000010789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000010789's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMLUG00000010789	SF3B4	56	36.649	ENSMLUG00000008254	PABPC4L	99	36.842
ENSMLUG00000010789	SF3B4	70	39.437	ENSMLUG00000012245	PABPC1	55	37.349

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000010789	SF3B4	100	99.528	ENSG00000143368	SF3B4	100	99.528	Homo_sapiens
ENSMLUG00000010789	SF3B4	57	96.667	ENSAPOG00000017647	sf3b4	77	80.564	Acanthochromis_polyacanthus
ENSMLUG00000010789	SF3B4	100	99.764	ENSAMEG00000010073	SF3B4	100	99.764	Ailuropoda_melanoleuca
ENSMLUG00000010789	SF3B4	57	97.083	ENSAOCG00000019801	sf3b4	77	80.878	Amphiprion_ocellaris
ENSMLUG00000010789	SF3B4	57	97.083	ENSAPEG00000010365	sf3b4	77	80.878	Amphiprion_percula
ENSMLUG00000010789	SF3B4	57	96.667	ENSATEG00000012844	sf3b4	60	96.667	Anabas_testudineus
ENSMLUG00000010789	SF3B4	62	96.198	ENSACAG00000010019	SF3B4	90	90.078	Anolis_carolinensis
ENSMLUG00000010789	SF3B4	100	99.528	ENSANAG00000031025	SF3B4	100	99.528	Aotus_nancymaae
ENSMLUG00000010789	SF3B4	57	95.833	ENSACLG00000014260	sf3b4	76	81.505	Astatotilapia_calliptera
ENSMLUG00000010789	SF3B4	57	96.250	ENSAMXG00000008282	sf3b4	60	96.250	Astyanax_mexicanus
ENSMLUG00000010789	SF3B4	100	99.764	ENSBTAG00000012495	SF3B4	100	99.764	Bos_taurus
ENSMLUG00000010789	SF3B4	91	96.354	ENSBTAG00000012793	-	93	96.354	Bos_taurus
ENSMLUG00000010789	SF3B4	90	81.787	ENSCJAG00000042351	SF3B4	87	81.787	Callithrix_jacchus
ENSMLUG00000010789	SF3B4	100	99.292	ENSCAFG00000011617	SF3B4	100	99.292	Canis_familiaris
ENSMLUG00000010789	SF3B4	100	99.292	ENSCAFG00020019775	SF3B4	100	99.292	Canis_lupus_dingo
ENSMLUG00000010789	SF3B4	100	99.764	ENSCHIG00000025663	-	100	99.764	Capra_hircus
ENSMLUG00000010789	SF3B4	100	99.528	ENSTSYG00000009295	SF3B4	100	99.528	Carlito_syrichta
ENSMLUG00000010789	SF3B4	100	99.528	ENSCPOG00000008267	SF3B4	100	99.528	Cavia_porcellus
ENSMLUG00000010789	SF3B4	100	86.768	ENSCCAG00000021751	-	69	92.593	Cebus_capucinus
ENSMLUG00000010789	SF3B4	95	85.323	ENSCCAG00000019823	-	77	86.196	Cebus_capucinus
ENSMLUG00000010789	SF3B4	100	99.528	ENSCATG00000033114	SF3B4	100	99.528	Cercocebus_atys
ENSMLUG00000010789	SF3B4	100	99.528	ENSCLAG00000015851	SF3B4	100	99.528	Chinchilla_lanigera
ENSMLUG00000010789	SF3B4	100	99.528	ENSCSAG00000018129	SF3B4	100	99.528	Chlorocebus_sabaeus
ENSMLUG00000010789	SF3B4	99	86.085	ENSCPBG00000008041	SF3B4	91	90.885	Chrysemys_picta_bellii
ENSMLUG00000010789	SF3B4	51	90.698	ENSCING00000002337	-	57	90.521	Ciona_intestinalis
ENSMLUG00000010789	SF3B4	100	99.528	ENSCANG00000035579	SF3B4	100	99.528	Colobus_angolensis_palliatus
ENSMLUG00000010789	SF3B4	100	99.528	ENSCGRG00001003590	Sf3b4	100	99.528	Cricetulus_griseus_chok1gshd
ENSMLUG00000010789	SF3B4	100	99.528	ENSCGRG00000016914	Sf3b4	100	99.528	Cricetulus_griseus_crigri
ENSMLUG00000010789	SF3B4	57	96.250	ENSDARG00000018574	sf3b4	77	79.310	Danio_rerio
ENSMLUG00000010789	SF3B4	97	80.872	ENSDNOG00000037231	-	76	82.109	Dasypus_novemcinctus
ENSMLUG00000010789	SF3B4	98	96.875	ENSDNOG00000048908	-	99	96.875	Dasypus_novemcinctus
ENSMLUG00000010789	SF3B4	100	99.764	ENSDORG00000016366	Sf3b4	100	99.764	Dipodomys_ordii
ENSMLUG00000010789	SF3B4	76	92.593	ENSETEG00000008963	SF3B4	76	92.593	Echinops_telfairi
ENSMLUG00000010789	SF3B4	100	99.764	ENSEASG00005001477	SF3B4	100	99.764	Equus_asinus_asinus
ENSMLUG00000010789	SF3B4	100	99.764	ENSECAG00000024737	SF3B4	100	99.764	Equus_caballus
ENSMLUG00000010789	SF3B4	100	99.764	ENSFCAG00000010106	SF3B4	100	99.764	Felis_catus
ENSMLUG00000010789	SF3B4	100	99.528	ENSFDAG00000009286	SF3B4	100	99.528	Fukomys_damarensis
ENSMLUG00000010789	SF3B4	54	97.380	ENSGMOG00000002519	sf3b4	67	97.368	Gadus_morhua
ENSMLUG00000010789	SF3B4	99	89.362	ENSGALG00000013352	SF3B4	90	89.817	Gallus_gallus
ENSMLUG00000010789	SF3B4	63	92.830	ENSGAFG00000010181	sf3b4	58	97.807	Gambusia_affinis
ENSMLUG00000010789	SF3B4	99	85.849	ENSGAGG00000025055	SF3B4	79	90.625	Gopherus_agassizii
ENSMLUG00000010789	SF3B4	100	73.585	ENSGGOG00000038845	-	54	89.524	Gorilla_gorilla
ENSMLUG00000010789	SF3B4	100	99.528	ENSGGOG00000004761	SF3B4	100	99.528	Gorilla_gorilla
ENSMLUG00000010789	SF3B4	57	95.833	ENSHBUG00000002028	sf3b4	76	81.505	Haplochromis_burtoni
ENSMLUG00000010789	SF3B4	100	99.528	ENSHGLG00000012360	SF3B4	100	99.528	Heterocephalus_glaber_female
ENSMLUG00000010789	SF3B4	100	98.349	ENSHGLG00100008533	SF3B4	100	98.349	Heterocephalus_glaber_male
ENSMLUG00000010789	SF3B4	57	96.667	ENSIPUG00000012242	Sf3b4	60	96.667	Ictalurus_punctatus
ENSMLUG00000010789	SF3B4	100	99.764	ENSSTOG00000000684	-	100	99.764	Ictidomys_tridecemlineatus
ENSMLUG00000010789	SF3B4	76	84.052	ENSJJAG00000022500	Sf3b4	95	84.052	Jaculus_jaculus
ENSMLUG00000010789	SF3B4	56	96.203	ENSKMAG00000008154	sf3b4	58	98.246	Kryptolebias_marmoratus
ENSMLUG00000010789	SF3B4	55	96.996	ENSLBEG00000026818	sf3b4	57	98.246	Labrus_bergylta
ENSMLUG00000010789	SF3B4	57	95.473	ENSLACG00000004436	SF3B4	87	85.625	Latimeria_chalumnae
ENSMLUG00000010789	SF3B4	57	95.885	ENSLOCG00000009048	sf3b4	75	85.580	Lepisosteus_oculatus
ENSMLUG00000010789	SF3B4	100	99.294	ENSLAFG00000008531	SF3B4	100	99.294	Loxodonta_africana
ENSMLUG00000010789	SF3B4	92	70.812	ENSMFAG00000039067	-	57	80.930	Macaca_fascicularis
ENSMLUG00000010789	SF3B4	100	99.528	ENSMFAG00000042395	SF3B4	100	99.528	Macaca_fascicularis
ENSMLUG00000010789	SF3B4	100	99.528	ENSMMUG00000007256	SF3B4	100	99.528	Macaca_mulatta
ENSMLUG00000010789	SF3B4	92	70.305	ENSMNEG00000031526	-	57	80.465	Macaca_nemestrina
ENSMLUG00000010789	SF3B4	100	99.528	ENSMNEG00000031839	SF3B4	100	99.528	Macaca_nemestrina
ENSMLUG00000010789	SF3B4	100	99.528	ENSMLEG00000038667	SF3B4	100	99.528	Mandrillus_leucophaeus
ENSMLUG00000010789	SF3B4	57	97.500	ENSMAMG00000014692	sf3b4	60	97.500	Mastacembelus_armatus
ENSMLUG00000010789	SF3B4	57	95.833	ENSMZEG00005026741	sf3b4	76	81.505	Maylandia_zebra
ENSMLUG00000010789	SF3B4	99	87.943	ENSMGAG00000000653	SF3B4	91	89.556	Meleagris_gallopavo
ENSMLUG00000010789	SF3B4	100	99.528	ENSMAUG00000015266	Sf3b4	100	99.528	Mesocricetus_auratus
ENSMLUG00000010789	SF3B4	100	99.764	ENSMICG00000044961	SF3B4	100	99.764	Microcebus_murinus
ENSMLUG00000010789	SF3B4	100	99.528	ENSMOCG00000013658	-	100	99.528	Microtus_ochrogaster
ENSMLUG00000010789	SF3B4	98	94.458	ENSMOCG00000014155	-	100	94.458	Microtus_ochrogaster
ENSMLUG00000010789	SF3B4	54	97.391	ENSMMOG00000018032	sf3b4	58	97.807	Mola_mola
ENSMLUG00000010789	SF3B4	100	99.057	ENSMODG00000018767	SF3B4	100	99.057	Monodelphis_domestica
ENSMLUG00000010789	SF3B4	54	97.797	ENSMALG00000006174	sf3b4	57	97.368	Monopterus_albus
ENSMLUG00000010789	SF3B4	100	99.292	MGP_CAROLIEiJ_G0025365	Sf3b4	100	99.292	Mus_caroli
ENSMLUG00000010789	SF3B4	100	99.528	ENSMUSG00000068856	Sf3b4	100	99.528	Mus_musculus
ENSMLUG00000010789	SF3B4	100	99.528	MGP_PahariEiJ_G0026809	Sf3b4	100	99.528	Mus_pahari
ENSMLUG00000010789	SF3B4	100	99.528	MGP_SPRETEiJ_G0026309	Sf3b4	100	99.528	Mus_spretus
ENSMLUG00000010789	SF3B4	100	99.764	ENSMPUG00000005563	SF3B4	100	99.764	Mustela_putorius_furo
ENSMLUG00000010789	SF3B4	100	99.292	ENSNGAG00000016337	Sf3b4	100	99.292	Nannospalax_galili
ENSMLUG00000010789	SF3B4	57	96.250	ENSNBRG00000013865	sf3b4	76	81.818	Neolamprologus_brichardi
ENSMLUG00000010789	SF3B4	100	76.415	ENSNLEG00000000537	-	82	84.568	Nomascus_leucogenys
ENSMLUG00000010789	SF3B4	100	70.093	ENSNLEG00000009693	-	100	70.093	Nomascus_leucogenys
ENSMLUG00000010789	SF3B4	81	100.000	ENSMEUG00000003272	SF3B4	82	100.000	Notamacropus_eugenii
ENSMLUG00000010789	SF3B4	99	97.150	ENSOPRG00000010808	SF3B4	99	97.150	Ochotona_princeps
ENSMLUG00000010789	SF3B4	75	86.751	ENSODEG00000003597	-	79	86.751	Octodon_degus
ENSMLUG00000010789	SF3B4	56	95.359	ENSONIG00000002730	sf3b4	57	97.807	Oreochromis_niloticus
ENSMLUG00000010789	SF3B4	99	58.372	ENSOANG00000004768	-	50	81.776	Ornithorhynchus_anatinus
ENSMLUG00000010789	SF3B4	100	99.764	ENSOCUG00000004614	SF3B4	100	99.764	Oryctolagus_cuniculus
ENSMLUG00000010789	SF3B4	55	96.983	ENSORLG00000003062	sf3b4	59	97.807	Oryzias_latipes
ENSMLUG00000010789	SF3B4	100	99.764	ENSOGAG00000006265	SF3B4	100	99.764	Otolemur_garnettii
ENSMLUG00000010789	SF3B4	100	99.764	ENSOARG00000020718	-	100	99.764	Ovis_aries
ENSMLUG00000010789	SF3B4	86	78.571	ENSOARG00000007368	-	77	79.688	Ovis_aries
ENSMLUG00000010789	SF3B4	100	81.604	ENSPPAG00000030024	-	78	82.407	Pan_paniscus
ENSMLUG00000010789	SF3B4	100	99.528	ENSPPAG00000040904	SF3B4	100	99.528	Pan_paniscus
ENSMLUG00000010789	SF3B4	100	99.764	ENSPPRG00000007384	SF3B4	100	99.764	Panthera_pardus
ENSMLUG00000010789	SF3B4	100	99.292	ENSPTIG00000014530	SF3B4	100	99.292	Panthera_tigris_altaica
ENSMLUG00000010789	SF3B4	100	78.774	ENSPTRG00000049727	-	59	89.831	Pan_troglodytes
ENSMLUG00000010789	SF3B4	100	99.528	ENSPTRG00000001243	SF3B4	100	99.528	Pan_troglodytes
ENSMLUG00000010789	SF3B4	100	99.528	ENSPANG00000005126	SF3B4	100	99.528	Papio_anubis
ENSMLUG00000010789	SF3B4	55	97.425	ENSPKIG00000020669	sf3b4	60	98.246	Paramormyrops_kingsleyae
ENSMLUG00000010789	SF3B4	66	75.714	ENSPSIG00000009565	SF3B4	68	98.378	Pelodiscus_sinensis
ENSMLUG00000010789	SF3B4	100	99.528	ENSPEMG00000017568	Sf3b4	100	99.528	Peromyscus_maniculatus_bairdii
ENSMLUG00000010789	SF3B4	61	88.716	ENSPMAG00000007842	-	50	95.283	Petromyzon_marinus
ENSMLUG00000010789	SF3B4	100	99.057	ENSPCIG00000008765	SF3B4	100	99.057	Phascolarctos_cinereus
ENSMLUG00000010789	SF3B4	64	90.842	ENSPFOG00000005754	sf3b4	58	97.368	Poecilia_formosa
ENSMLUG00000010789	SF3B4	64	90.842	ENSPLAG00000001401	sf3b4	63	97.368	Poecilia_latipinna
ENSMLUG00000010789	SF3B4	64	90.842	ENSPREG00000011076	sf3b4	57	97.807	Poecilia_reticulata
ENSMLUG00000010789	SF3B4	63	96.635	ENSPCAG00000000392	SF3B4	63	96.635	Procavia_capensis
ENSMLUG00000010789	SF3B4	100	99.764	ENSPCOG00000015399	SF3B4	100	99.764	Propithecus_coquereli
ENSMLUG00000010789	SF3B4	100	99.764	ENSPVAG00000014171	SF3B4	100	99.764	Pteropus_vampyrus
ENSMLUG00000010789	SF3B4	57	95.833	ENSPNYG00000012700	sf3b4	76	81.505	Pundamilia_nyererei
ENSMLUG00000010789	SF3B4	57	96.667	ENSPNAG00000000686	sf3b4	61	96.667	Pygocentrus_nattereri
ENSMLUG00000010789	SF3B4	100	99.528	ENSRNOG00000021181	Sf3b4	100	99.528	Rattus_norvegicus
ENSMLUG00000010789	SF3B4	100	99.528	ENSRBIG00000043392	SF3B4	100	99.528	Rhinopithecus_bieti
ENSMLUG00000010789	SF3B4	92	71.208	ENSRROG00000028213	-	91	67.647	Rhinopithecus_roxellana
ENSMLUG00000010789	SF3B4	100	99.528	ENSRROG00000029366	SF3B4	100	99.528	Rhinopithecus_roxellana
ENSMLUG00000010789	SF3B4	100	99.292	ENSSBOG00000012310	-	100	99.292	Saimiri_boliviensis_boliviensis
ENSMLUG00000010789	SF3B4	100	72.642	ENSSBOG00000025174	-	73	79.257	Saimiri_boliviensis_boliviensis
ENSMLUG00000010789	SF3B4	100	96.462	ENSSHAG00000004043	SF3B4	100	98.688	Sarcophilus_harrisii
ENSMLUG00000010789	SF3B4	56	96.624	ENSSFOG00015008864	sf3b4	56	98.246	Scleropages_formosus
ENSMLUG00000010789	SF3B4	57	96.667	ENSSMAG00000006837	sf3b4	60	96.667	Scophthalmus_maximus
ENSMLUG00000010789	SF3B4	57	97.500	ENSSDUG00000012064	sf3b4	60	97.500	Seriola_dumerili
ENSMLUG00000010789	SF3B4	57	97.500	ENSSLDG00000014226	sf3b4	60	97.500	Seriola_lalandi_dorsalis
ENSMLUG00000010789	SF3B4	72	95.102	ENSSPUG00000001028	SF3B4	57	98.684	Sphenodon_punctatus
ENSMLUG00000010789	SF3B4	57	97.083	ENSSPAG00000019219	sf3b4	60	97.083	Stegastes_partitus
ENSMLUG00000010789	SF3B4	85	66.022	ENSSSCG00000039440	-	79	65.432	Sus_scrofa
ENSMLUG00000010789	SF3B4	100	99.528	ENSSSCG00000006665	-	100	99.528	Sus_scrofa
ENSMLUG00000010789	SF3B4	56	97.034	ENSTGUG00000004470	SF3B4	90	98.246	Taeniopygia_guttata
ENSMLUG00000010789	SF3B4	54	96.916	ENSTRUG00000004516	sf3b4	57	96.491	Takifugu_rubripes
ENSMLUG00000010789	SF3B4	100	99.764	ENSTTRG00000005217	SF3B4	100	99.764	Tursiops_truncatus
ENSMLUG00000010789	SF3B4	100	99.764	ENSUAMG00000022468	SF3B4	100	99.764	Ursus_americanus
ENSMLUG00000010789	SF3B4	100	98.821	ENSUMAG00000003802	SF3B4	100	98.821	Ursus_maritimus
ENSMLUG00000010789	SF3B4	97	99.757	ENSVPAG00000008152	SF3B4	100	99.757	Vicugna_pacos
ENSMLUG00000010789	SF3B4	99	92.584	ENSVVUG00000007732	-	100	92.584	Vulpes_vulpes
ENSMLUG00000010789	SF3B4	65	96.014	ENSVVUG00000022697	-	58	96.014	Vulpes_vulpes
ENSMLUG00000010789	SF3B4	54	97.826	ENSXCOG00000019895	sf3b4	58	97.807	Xiphophorus_couchianus
ENSMLUG00000010789	SF3B4	54	97.826	ENSXMAG00000003772	sf3b4	58	97.807	Xiphophorus_maculatus