EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMLUG00000010994 (Gene tree)
Gene ID: 102436709
Gene Symbol: -
Alias: -
Full Name: pentatricopeptide repeat-containing protein 1%2C mitochondrial
Gene Type: protein_coding
Species: Myotis_lucifugus
Status: putative
Strand: Plus strand
Length: 34019 bases
Position: chrGL429767:1272994-1307012
Accession: 102436709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMLUP00000010014	PPR	PF01535.20	2.9e-16	1	2
ENSMLUP00000010014	PPR	PF01535.20	2.9e-16	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMLUT00000010989	-	2265	XM_006081064	ENSMLUP00000010014	754 (aa)	XP_006081126	G1PH71

Gene Model

Click here to download ENSMLUG00000010994's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMLUG00000010994's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMLUG00000010994	-	94	78.481	ENSG00000106246	PTCD1	100	78.622	Homo_sapiens
ENSMLUG00000010994	-	100	78.042	ENSG00000248919	ATP5MF-PTCD1	99	78.175	Homo_sapiens
ENSMLUG00000010994	-	81	47.002	ENSAPOG00000010679	ptcd1	85	49.376	Acanthochromis_polyacanthus
ENSMLUG00000010994	-	100	85.337	ENSAMEG00000006224	-	99	85.337	Ailuropoda_melanoleuca
ENSMLUG00000010994	-	85	49.242	ENSACIG00000017861	ptcd1	90	50.238	Amphilophus_citrinellus
ENSMLUG00000010994	-	84	45.853	ENSAOCG00000022617	ptcd1	85	47.530	Amphiprion_ocellaris
ENSMLUG00000010994	-	88	46.557	ENSAOCG00000020741	-	84	48.293	Amphiprion_ocellaris
ENSMLUG00000010994	-	89	45.655	ENSAPEG00000022632	ptcd1	84	48.293	Amphiprion_percula
ENSMLUG00000010994	-	80	50.411	ENSATEG00000007016	ptcd1	80	51.111	Anabas_testudineus
ENSMLUG00000010994	-	79	60.465	ENSAPLG00000006862	-	93	60.465	Anas_platyrhynchos
ENSMLUG00000010994	-	100	54.910	ENSACAG00000012871	-	99	55.150	Anolis_carolinensis
ENSMLUG00000010994	-	92	79.023	ENSANAG00000035790	-	100	78.879	Aotus_nancymaae
ENSMLUG00000010994	-	83	47.713	ENSACLG00000002824	ptcd1	80	50.251	Astatotilapia_calliptera
ENSMLUG00000010994	-	81	48.107	ENSAMXG00000037292	ptcd1	88	48.107	Astyanax_mexicanus
ENSMLUG00000010994	-	94	83.567	ENSBTAG00000020440	-	87	83.427	Bos_taurus
ENSMLUG00000010994	-	94	79.635	ENSCJAG00000015815	-	100	79.494	Callithrix_jacchus
ENSMLUG00000010994	-	100	84.238	ENSCAFG00000015055	-	99	84.238	Canis_familiaris
ENSMLUG00000010994	-	94	84.831	ENSCAFG00020014480	-	94	84.831	Canis_lupus_dingo
ENSMLUG00000010994	-	94	82.535	ENSCHIG00000027000	-	99	82.394	Capra_hircus
ENSMLUG00000010994	-	94	83.239	ENSTSYG00000029495	-	100	83.099	Carlito_syrichta
ENSMLUG00000010994	-	87	79.027	ENSCAPG00000014660	-	98	79.225	Cavia_aperea
ENSMLUG00000010994	-	94	78.873	ENSCPOG00000001780	-	100	78.732	Cavia_porcellus
ENSMLUG00000010994	-	94	78.261	ENSCCAG00000034025	-	100	78.401	Cebus_capucinus
ENSMLUG00000010994	-	94	78.371	ENSCATG00000040859	-	100	78.792	Cercocebus_atys
ENSMLUG00000010994	-	92	81.089	ENSCLAG00000006354	-	100	80.282	Chinchilla_lanigera
ENSMLUG00000010994	-	86	78.374	ENSCSAG00000017794	-	95	78.834	Chlorocebus_sabaeus
ENSMLUG00000010994	-	92	56.038	ENSCPBG00000020866	-	85	60.669	Chrysemys_picta_bellii
ENSMLUG00000010994	-	94	78.451	ENSCANG00000023441	-	100	78.592	Colobus_angolensis_palliatus
ENSMLUG00000010994	-	94	76.379	ENSCGRG00001023686	Ptcd1	99	76.096	Cricetulus_griseus_chok1gshd
ENSMLUG00000010994	-	93	76.420	ENSCGRG00000015031	Ptcd1	99	76.136	Cricetulus_griseus_crigri
ENSMLUG00000010994	-	79	47.659	ENSCSEG00000002378	ptcd1	80	47.619	Cynoglossus_semilaevis
ENSMLUG00000010994	-	80	48.033	ENSCVAG00000003621	ptcd1	88	47.611	Cyprinodon_variegatus
ENSMLUG00000010994	-	78	49.079	ENSCVAG00000015826	ptcd1	81	48.653	Cyprinodon_variegatus
ENSMLUG00000010994	-	87	48.837	ENSDARG00000076176	ptcd1	88	51.050	Danio_rerio
ENSMLUG00000010994	-	94	79.296	ENSDNOG00000009957	-	100	79.718	Dasypus_novemcinctus
ENSMLUG00000010994	-	92	78.192	ENSDORG00000000740	Ptcd1	99	78.192	Dipodomys_ordii
ENSMLUG00000010994	-	79	41.231	ENSEBUG00000014515	ptcd1	96	41.207	Eptatretus_burgeri
ENSMLUG00000010994	-	94	87.746	ENSEASG00005002480	-	100	87.324	Equus_asinus_asinus
ENSMLUG00000010994	-	94	88.169	ENSECAG00000016617	-	100	87.746	Equus_caballus
ENSMLUG00000010994	-	90	45.035	ENSELUG00000016517	ptcd1	82	48.148	Esox_lucius
ENSMLUG00000010994	-	94	85.070	ENSFCAG00000015069	-	100	84.648	Felis_catus
ENSMLUG00000010994	-	90	56.643	ENSFALG00000013803	-	97	57.123	Ficedula_albicollis
ENSMLUG00000010994	-	94	79.972	ENSFDAG00000006393	-	100	79.408	Fukomys_damarensis
ENSMLUG00000010994	-	69	48.387	ENSFHEG00000012491	ptcd1	87	48.387	Fundulus_heteroclitus
ENSMLUG00000010994	-	77	48.359	ENSGMOG00000007639	ptcd1	85	50.000	Gadus_morhua
ENSMLUG00000010994	-	82	59.177	ENSGALG00000004711	-	87	59.390	Gallus_gallus
ENSMLUG00000010994	-	78	49.749	ENSGAFG00000013175	ptcd1	82	49.495	Gambusia_affinis
ENSMLUG00000010994	-	80	49.353	ENSGACG00000016607	ptcd1	91	49.918	Gasterosteus_aculeatus
ENSMLUG00000010994	-	86	56.268	ENSGAGG00000021832	-	85	60.406	Gopherus_agassizii
ENSMLUG00000010994	-	94	78.451	ENSGGOG00000015123	-	99	78.451	Gorilla_gorilla
ENSMLUG00000010994	-	78	50.334	ENSHBUG00000018275	ptcd1	80	50.251	Haplochromis_burtoni
ENSMLUG00000010994	-	94	80.000	ENSHGLG00000017621	-	100	79.718	Heterocephalus_glaber_female
ENSMLUG00000010994	-	94	80.000	ENSHGLG00100007218	-	100	79.718	Heterocephalus_glaber_male
ENSMLUG00000010994	-	79	48.080	ENSHCOG00000010784	ptcd1	82	48.376	Hippocampus_comes
ENSMLUG00000010994	-	94	80.141	ENSSTOG00000001682	-	100	80.000	Ictidomys_tridecemlineatus
ENSMLUG00000010994	-	94	76.197	ENSJJAG00000000319	Ptcd1	100	75.915	Jaculus_jaculus
ENSMLUG00000010994	-	80	48.465	ENSKMAG00000008708	ptcd1	83	48.627	Kryptolebias_marmoratus
ENSMLUG00000010994	-	83	46.541	ENSLBEG00000008061	ptcd1	80	49.150	Labrus_bergylta
ENSMLUG00000010994	-	83	56.735	ENSLACG00000011172	ptcd1	85	57.818	Latimeria_chalumnae
ENSMLUG00000010994	-	85	52.530	ENSLOCG00000004833	ptcd1	93	55.000	Lepisosteus_oculatus
ENSMLUG00000010994	-	94	75.668	ENSLAFG00000002588	-	100	75.527	Loxodonta_africana
ENSMLUG00000010994	-	94	78.230	ENSMFAG00000041324	-	100	78.652	Macaca_fascicularis
ENSMLUG00000010994	-	100	77.675	ENSMMUG00000030408	-	100	78.511	Macaca_mulatta
ENSMLUG00000010994	-	94	78.230	ENSMNEG00000043786	-	100	78.652	Macaca_nemestrina
ENSMLUG00000010994	-	94	59.691	ENSMLEG00000031179	-	100	61.798	Mandrillus_leucophaeus
ENSMLUG00000010994	-	94	47.525	ENSMAMG00000007623	ptcd1	95	47.383	Mastacembelus_armatus
ENSMLUG00000010994	-	83	47.713	ENSMZEG00005012722	ptcd1	80	50.251	Maylandia_zebra
ENSMLUG00000010994	-	99	56.069	ENSMGAG00000004211	-	99	55.937	Meleagris_gallopavo
ENSMLUG00000010994	-	94	81.268	ENSMICG00000017428	-	100	80.986	Microcebus_murinus
ENSMLUG00000010994	-	80	48.026	ENSMMOG00000020243	ptcd1	88	48.557	Mola_mola
ENSMLUG00000010994	-	93	59.973	ENSMODG00000001350	-	99	59.704	Monodelphis_domestica
ENSMLUG00000010994	-	90	47.605	ENSMALG00000018442	ptcd1	80	50.847	Monopterus_albus
ENSMLUG00000010994	-	93	78.031	MGP_CAROLIEiJ_G0028011	Ptcd1	99	76.814	Mus_caroli
ENSMLUG00000010994	-	93	78.174	ENSMUSG00000029624	Ptcd1	99	76.956	Mus_musculus
ENSMLUG00000010994	-	94	77.935	MGP_PahariEiJ_G0024580	Ptcd1	100	77.652	Mus_pahari
ENSMLUG00000010994	-	93	78.459	MGP_SPRETEiJ_G0029012	Ptcd1	99	77.240	Mus_spretus
ENSMLUG00000010994	-	94	84.203	ENSMPUG00000016518	-	100	83.780	Mustela_putorius_furo
ENSMLUG00000010994	-	86	47.050	ENSNBRG00000010079	ptcd1	86	49.273	Neolamprologus_brichardi
ENSMLUG00000010994	-	94	81.125	ENSNLEG00000011060	-	99	81.125	Nomascus_leucogenys
ENSMLUG00000010994	-	92	62.500	ENSMEUG00000006930	-	99	62.500	Notamacropus_eugenii
ENSMLUG00000010994	-	84	80.233	ENSOPRG00000013647	-	90	80.233	Ochotona_princeps
ENSMLUG00000010994	-	78	48.997	ENSONIG00000003168	ptcd1	95	48.576	Oreochromis_niloticus
ENSMLUG00000010994	-	82	55.573	ENSOANG00000007728	-	73	58.111	Ornithorhynchus_anatinus
ENSMLUG00000010994	-	94	79.379	ENSOCUG00000010584	-	98	79.096	Oryctolagus_cuniculus
ENSMLUG00000010994	-	82	49.120	ENSORLG00000009275	ptcd1	88	48.714	Oryzias_latipes
ENSMLUG00000010994	-	82	48.101	ENSORLG00020000988	ptcd1	88	47.695	Oryzias_latipes_hni
ENSMLUG00000010994	-	82	48.480	ENSORLG00015010557	ptcd1	88	48.071	Oryzias_latipes_hsok
ENSMLUG00000010994	-	85	47.130	ENSOMEG00000020627	ptcd1	86	49.088	Oryzias_melastigma
ENSMLUG00000010994	-	93	78.551	ENSOGAG00000010877	-	100	78.267	Otolemur_garnettii
ENSMLUG00000010994	-	94	77.496	ENSOARG00000018676	-	100	77.356	Ovis_aries
ENSMLUG00000010994	-	94	78.059	ENSPPAG00000036024	-	100	78.200	Pan_paniscus
ENSMLUG00000010994	-	94	85.070	ENSPPRG00000003478	-	100	83.685	Panthera_pardus
ENSMLUG00000010994	-	94	77.918	ENSPTRG00000019452	-	100	78.059	Pan_troglodytes
ENSMLUG00000010994	-	94	78.511	ENSPANG00000016730	-	100	78.933	Papio_anubis
ENSMLUG00000010994	-	89	50.221	ENSPKIG00000014215	ptcd1	92	52.019	Paramormyrops_kingsleyae
ENSMLUG00000010994	-	79	58.660	ENSPSIG00000011184	-	100	58.649	Pelodiscus_sinensis
ENSMLUG00000010994	-	68	42.315	ENSPMAG00000009667	ptcd1	100	42.256	Petromyzon_marinus
ENSMLUG00000010994	-	94	60.324	ENSPCIG00000024778	-	99	60.324	Phascolarctos_cinereus
ENSMLUG00000010994	-	78	49.167	ENSPFOG00000004458	ptcd1	82	48.911	Poecilia_formosa
ENSMLUG00000010994	-	78	49.663	ENSPLAG00000011051	ptcd1	82	48.911	Poecilia_latipinna
ENSMLUG00000010994	-	78	49.167	ENSPMEG00000020547	ptcd1	82	49.079	Poecilia_mexicana
ENSMLUG00000010994	-	77	49.574	ENSPREG00000000059	ptcd1	87	47.030	Poecilia_reticulata
ENSMLUG00000010994	-	88	79.576	ENSPPYG00000017377	-	99	79.576	Pongo_abelii
ENSMLUG00000010994	-	76	83.099	ENSPCAG00000001852	-	89	82.394	Procavia_capensis
ENSMLUG00000010994	-	94	82.113	ENSPCOG00000018596	-	100	81.831	Propithecus_coquereli
ENSMLUG00000010994	-	64	92.000	ENSPVAG00000007529	-	73	92.000	Pteropus_vampyrus
ENSMLUG00000010994	-	78	50.334	ENSPNYG00000019993	ptcd1	80	50.251	Pundamilia_nyererei
ENSMLUG00000010994	-	90	50.508	ENSPNAG00000014931	ptcd1	91	52.516	Pygocentrus_nattereri
ENSMLUG00000010994	-	93	76.605	ENSRNOG00000000987	Ptcd1	99	76.034	Rattus_norvegicus
ENSMLUG00000010994	-	94	78.592	ENSRBIG00000043393	-	99	79.090	Rhinopithecus_bieti
ENSMLUG00000010994	-	94	78.451	ENSRROG00000036420	-	99	78.947	Rhinopithecus_roxellana
ENSMLUG00000010994	-	94	80.028	ENSSBOG00000024114	-	100	80.169	Saimiri_boliviensis_boliviensis
ENSMLUG00000010994	-	92	59.147	ENSSHAG00000011376	-	98	59.010	Sarcophilus_harrisii
ENSMLUG00000010994	-	81	54.173	ENSSFOG00015007909	ptcd1	83	54.114	Scleropages_formosus
ENSMLUG00000010994	-	80	47.720	ENSSMAG00000000218	ptcd1	93	47.954	Scophthalmus_maximus
ENSMLUG00000010994	-	92	46.790	ENSSDUG00000015671	ptcd1	95	46.088	Seriola_dumerili
ENSMLUG00000010994	-	88	46.815	ENSSLDG00000014261	ptcd1	92	46.233	Seriola_lalandi_dorsalis
ENSMLUG00000010994	-	82	57.698	ENSSPUG00000003540	-	85	57.704	Sphenodon_punctatus
ENSMLUG00000010994	-	92	45.661	ENSSPAG00000011049	ptcd1	83	49.188	Stegastes_partitus
ENSMLUG00000010994	-	86	84.946	ENSSSCG00000007622	-	99	84.743	Sus_scrofa
ENSMLUG00000010994	-	81	59.837	ENSTGUG00000007563	-	99	60.362	Taeniopygia_guttata
ENSMLUG00000010994	-	79	48.409	ENSTRUG00000013471	ptcd1	81	48.409	Takifugu_rubripes
ENSMLUG00000010994	-	87	45.195	ENSTNIG00000008271	ptcd1	93	45.195	Tetraodon_nigroviridis
ENSMLUG00000010994	-	94	79.383	ENSTBEG00000011021	-	100	79.102	Tupaia_belangeri
ENSMLUG00000010994	-	94	82.535	ENSTTRG00000003006	-	100	82.394	Tursiops_truncatus
ENSMLUG00000010994	-	94	85.614	ENSUAMG00000008049	-	100	85.614	Ursus_americanus
ENSMLUG00000010994	-	94	84.561	ENSVVUG00000008836	-	100	84.136	Vulpes_vulpes
ENSMLUG00000010994	-	84	52.188	ENSXETG00000009891	ptcd1	87	53.507	Xenopus_tropicalis
ENSMLUG00000010994	-	78	49.493	ENSXMAG00000015540	ptcd1	85	48.613	Xiphophorus_maculatus